RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	MIA3	Q5JRA6	1907 aa		13.78	□□□□□ -0.2
NUP62-223	ENST00000601665	DOCK8	Q8NF50	2099 aa		13.78	□□□□□ -0.2
NUP62-223	ENST00000601665	ZBTB43	O43298	467 aa		13.77	□□□□□ -0.21
NUP62-223	ENST00000601665	TGM5	O43548	720 aa		13.77	□□□□□ -0.21
NUP62-223	ENST00000601665	DSG1	Q02413	1049 aa		13.77	□□□□□ -0.21
NUP62-223	ENST00000601665	CREM	Q03060	361 aa		13.77	□□□□□ -0.21
NUP62-223	ENST00000601665	XKR3	Q5GH77	459 aa		13.77	□□□□□ -0.21
NUP62-223	ENST00000601665	PPM1J	Q5JR12	505 aa		13.77	□□□□□ -0.21
NUP62-223	ENST00000601665	APOA5	Q6Q788	366 aa		13.77	□□□□□ -0.21
NUP62-223	ENST00000601665	PARM1	Q6UWI2	310 aa		13.77	□□□□□ -0.21
NUP62-223	ENST00000601665	MIER3	Q7Z3K6	550 aa		13.77	□□□□□ -0.21
NUP62-223	ENST00000601665	ZBTB44	Q8NCP5	570 aa		13.77	□□□□□ -0.21
NUP62-223	ENST00000601665	CRYGN	Q8WXF5	182 aa		13.77	□□□□□ -0.21
NUP62-223	ENST00000601665	FGF14	Q92915	247 aa		13.77	□□□□□ -0.21
NUP62-223	ENST00000601665	COLEC11	Q9BWP8	271 aa		13.77	□□□□□ -0.21
NUP62-223	ENST00000601665	TEKT3	Q9BXF9	490 aa		13.77	□□□□□ -0.21
NUP62-223	ENST00000601665	OSBPL6	Q9BZF3	934 aa		13.77	□□□□□ -0.21
NUP62-223	ENST00000601665	AGPAT5	Q9NUQ2	364 aa		13.77	□□□□□ -0.21
NUP62-223	ENST00000601665	CDH7	Q9ULB5	785 aa		13.77	□□□□□ -0.21
NUP62-223	ENST00000601665	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.77	□□□□□ -0.21
NUP62-223	ENST00000601665	GOLGA8A	A7E2F4	631 aa		13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	DDX11L8	A8MPP1	907 aa		13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	GOLGA8B	A8MQT2	603 aa		13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	C1R	P00736	705 aa		13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	ITGA4	P13612	1032 aa		13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	CD72	P21854	359 aa		13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	AFF1	P51825	1210 aa	Known RBP	13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	DMWD	Q09019	674 aa		13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	TARBP2	Q15633	366 aa	Known RBP	13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	USP41	Q3LFD5	358 aa		13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	LIN9	Q5TKA1	542 aa		13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	LRCH2	Q5VUJ6	765 aa		13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	MRPL10	Q7Z7H8	261 aa	Known RBP	13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	KSR1	Q8IVT5	923 aa		13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	CNNM3	Q8NE01	707 aa		13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	EXOC6	Q8TAG9	804 aa		13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	NETO1	Q8TDF5	533 aa		13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	NELL2	Q99435	816 aa		13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	SH2D3A	Q9BRG2	576 aa		13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	RPP25	Q9BUL9	199 aa	Known RBP	13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	LTB4R2	Q9NPC1	389 aa		13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	MARCH5	Q9NX47	278 aa		13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	POLI	Q9UNA4	740 aa		13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	MTF2	Q9Y483	593 aa	Predicted RBP	13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	FAM208B	Q5VWN6	2430 aa		13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	CEP295	Q9C0D2	2601 aa		13.76	□□□□□ -0.21
NUP62-223	ENST00000601665	TMEM150B	A6NC51	233 aa		13.75	□□□□□ -0.21
NUP62-223	ENST00000601665	SLC27A2	O14975	620 aa		13.75	□□□□□ -0.21
NUP62-223	ENST00000601665	MSH4	O15457	936 aa		13.75	□□□□□ -0.21
NUP62-223	ENST00000601665	ZMYND10	O75800	440 aa		13.75	□□□□□ -0.21
NUP62-223	ENST00000601665	GNA11	P29992	359 aa		13.75	□□□□□ -0.21
NUP62-223	ENST00000601665	PPP2R5D	Q14738	602 aa		13.75	□□□□□ -0.21
NUP62-223	ENST00000601665	TSSK4	Q6SA08	328 aa		13.75	□□□□□ -0.21
NUP62-223	ENST00000601665	COLGALT2	Q8IYK4	626 aa		13.75	□□□□□ -0.21
NUP62-223	ENST00000601665	B3GALT6	Q96L58	329 aa		13.75	□□□□□ -0.21
NUP62-223	ENST00000601665	RIT2	Q99578	217 aa		13.75	□□□□□ -0.21
NUP62-223	ENST00000601665	DDX23	Q9BUQ8	820 aa	Known RBP	13.75	□□□□□ -0.21
NUP62-223	ENST00000601665	PHF20	Q9BVI0	1012 aa		13.75	□□□□□ -0.21
NUP62-223	ENST00000601665	NIFK	Q9BYG3	293 aa	Known RBP	13.75	□□□□□ -0.21
NUP62-223	ENST00000601665	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.75	□□□□□ -0.21
NUP62-223	ENST00000601665	UNC45A	Q9H3U1	944 aa		13.75	□□□□□ -0.21
NUP62-223	ENST00000601665	MRPS17	Q9Y2R5	130 aa	Known RBP	13.75	□□□□□ -0.21
NUP62-223	ENST00000601665	COL4A3BP	Q9Y5P4	624 aa		13.75	□□□□□ -0.21
NUP62-223	ENST00000601665	IGKV6-21	A0A0C4DH24	114 aa		13.74	□□□□□ -0.21
NUP62-223	ENST00000601665	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.74	□□□□□ -0.21
NUP62-223	ENST00000601665	ESYT2	A0FGR8	921 aa		13.74	□□□□□ -0.21
NUP62-223	ENST00000601665	LILRB5	O75023	590 aa		13.74	□□□□□ -0.21
NUP62-223	ENST00000601665	XYLB	O75191	536 aa		13.74	□□□□□ -0.21
NUP62-223	ENST00000601665	MAF	O75444	373 aa	Predicted RBP	13.74	□□□□□ -0.21
NUP62-223	ENST00000601665	ERLIN2	O94905	339 aa		13.74	□□□□□ -0.21
NUP62-223	ENST00000601665	SRGAP2C	P0DJJ0	459 aa		13.74	□□□□□ -0.21
NUP62-223	ENST00000601665	CIITA	P33076	1130 aa		13.74	□□□□□ -0.21
NUP62-223	ENST00000601665	MLH1	P40692	756 aa		13.74	□□□□□ -0.21
NUP62-223	ENST00000601665	NCBP1	Q09161	790 aa	Known RBP	13.74	□□□□□ -0.21
NUP62-223	ENST00000601665	SPEM2	Q0P670	501 aa		13.74	□□□□□ -0.21
NUP62-223	ENST00000601665	FUT2	Q10981	343 aa		13.74	□□□□□ -0.21
NUP62-223	ENST00000601665	LPAL2	Q16609	132 aa		13.74	□□□□□ -0.21
NUP62-223	ENST00000601665	PFKFB3	Q16875	520 aa	Predicted RBP	13.74	□□□□□ -0.21
NUP62-223	ENST00000601665	TPRG1	Q6ZUI0	275 aa		13.74	□□□□□ -0.21
NUP62-223	ENST00000601665	RDM1	Q8NG50	284 aa		13.74	□□□□□ -0.21
NUP62-223	ENST00000601665	BICD2	Q8TD16	824 aa		13.74	□□□□□ -0.21
NUP62-223	ENST00000601665	SLC7A3	Q8WY07	619 aa		13.74	□□□□□ -0.21
NUP62-223	ENST00000601665	FGF13	Q92913	245 aa		13.74	□□□□□ -0.21
NUP62-223	ENST00000601665	CCDC136	Q96JN2	1154 aa		13.74	□□□□□ -0.21
NUP62-223	ENST00000601665	GAD1	Q99259	594 aa		13.74	□□□□□ -0.21
NUP62-223	ENST00000601665	KXD1	Q9BQD3	176 aa		13.74	□□□□□ -0.21
NUP62-223	ENST00000601665	ZMYND12	Q9H0C1	365 aa		13.74	□□□□□ -0.21
NUP62-223	ENST00000601665	ARL5C	A6NH57	179 aa		13.73	□□□□□ -0.21
NUP62-223	ENST00000601665	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
NUP62-223	ENST00000601665	RPL17	P18621	184 aa	Known RBP	13.73	□□□□□ -0.21
NUP62-223	ENST00000601665	NCL	P19338	710 aa	Known RBP	13.73	□□□□□ -0.21
NUP62-223	ENST00000601665	SCNN1G	P51170	649 aa		13.73	□□□□□ -0.21
NUP62-223	ENST00000601665	NRL	P54845	237 aa		13.73	□□□□□ -0.21
NUP62-223	ENST00000601665	COL9A3	Q14050	684 aa	Predicted RBP	13.73	□□□□□ -0.21
NUP62-223	ENST00000601665	PPM1L	Q5SGD2	360 aa		13.73	□□□□□ -0.21
NUP62-223	ENST00000601665	CREB3L3	Q68CJ9	461 aa		13.73	□□□□□ -0.21
NUP62-223	ENST00000601665	FUT10	Q6P4F1	479 aa		13.73	□□□□□ -0.21
NUP62-223	ENST00000601665	ZNF852	Q6ZMS4	543 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms