RNA–Protein interactions for RNA: ENST00000601656.5

FARP1-235, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-235ENST00000601656 NEK9Q8TD19 979 aa10.59□□□□□ -0.71
FARP1-235ENST00000601656 USP7Q93009 1102 aa10.59□□□□□ -0.71
FARP1-235ENST00000601656 PRRX2Q99811 253 aa10.59□□□□□ -0.71
FARP1-235ENST00000601656 PPCSQ9HAB8 311 aa10.59□□□□□ -0.71
FARP1-235ENST00000601656 ZBTB40Q9NUA8 1239 aa10.59□□□□□ -0.71
FARP1-235ENST00000601656 MTUS1Q9ULD2 1270 aa10.59□□□□□ -0.71
FARP1-235ENST00000601656 TMX2Q9Y320 296 aa10.59□□□□□ -0.71
FARP1-235ENST00000601656 DYRK1BQ9Y463 629 aa10.59□□□□□ -0.71
FARP1-235ENST00000601656 TNPO3Q9Y5L0 923 aaKnown RBP10.59□□□□□ -0.71
FARP1-235ENST00000601656 C5orf42Q9H799 3197 aa10.59□□□□□ -0.71
FARP1-235ENST00000601656 TECTAO75443 2155 aa10.59□□□□□ -0.71
FARP1-235ENST00000601656 TRIP12Q14669 1992 aaPredicted RBP10.58□□□□□ -0.72
FARP1-235ENST00000601656 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.58□□□□□ -0.72
FARP1-235ENST00000601656 SUPT20HL2P0C7V6 817 aa10.58□□□□□ -0.72
FARP1-235ENST00000601656 PABPC1P11940 636 aaKnown RBP10.58□□□□□ -0.72
FARP1-235ENST00000601656 BPIP17213 487 aa10.58□□□□□ -0.72
FARP1-235ENST00000601656 GPLD1P80108 840 aa10.58□□□□□ -0.72
FARP1-235ENST00000601656 ZP2Q05996 745 aa10.58□□□□□ -0.72
FARP1-235ENST00000601656 GABPAQ06546 454 aa10.58□□□□□ -0.72
FARP1-235ENST00000601656 SPEM2Q0P670 501 aa10.58□□□□□ -0.72
FARP1-235ENST00000601656 TCF15Q12870 199 aa10.58□□□□□ -0.72
FARP1-235ENST00000601656 AP3B2Q13367 1082 aa10.58□□□□□ -0.72
FARP1-235ENST00000601656 FSCN1Q16658 493 aaKnown RBP10.58□□□□□ -0.72
FARP1-235ENST00000601656 WIPI1Q5MNZ9 446 aaPredicted RBP10.58□□□□□ -0.72
FARP1-235ENST00000601656 TMEM201Q5SNT2 666 aa10.58□□□□□ -0.72
FARP1-235ENST00000601656 C20orf194Q5TEA3 1177 aa10.58□□□□□ -0.72
FARP1-235ENST00000601656 TMEM179Q6ZVK1 233 aa10.58□□□□□ -0.72
FARP1-235ENST00000601656 VN1R5Q7Z5H4 357 aa10.58□□□□□ -0.72
FARP1-235ENST00000601656 NPAS3Q8IXF0 933 aa10.58□□□□□ -0.72
FARP1-235ENST00000601656 SLC7A14Q8TBB6 771 aa10.58□□□□□ -0.72
FARP1-235ENST00000601656 AP5M1Q9H0R1 490 aa10.58□□□□□ -0.72
FARP1-235ENST00000601656 ALDH8A1Q9H2A2 487 aaPredicted RBP10.58□□□□□ -0.72
FARP1-235ENST00000601656 SH2D4AQ9H788 454 aa10.58□□□□□ -0.72
FARP1-235ENST00000601656 GPR108Q9NPR9 543 aa10.58□□□□□ -0.72
FARP1-235ENST00000601656 TRMT13Q9NUP7 481 aaKnown RBP10.58□□□□□ -0.72
FARP1-235ENST00000601656 FAM86C1Q9NVL1 165 aa10.58□□□□□ -0.72
FARP1-235ENST00000601656 SOX13Q9UN79 622 aa10.58□□□□□ -0.72
FARP1-235ENST00000601656 FAM50BQ9Y247 325 aa10.58□□□□□ -0.72
FARP1-235ENST00000601656 PCDHGC4Q9Y5F7 938 aa10.58□□□□□ -0.72
FARP1-235ENST00000601656 MYH8P13535 1937 aa10.58□□□□□ -0.72
FARP1-235ENST00000601656 ASTN1O14525 1302 aa10.58□□□□□ -0.72
FARP1-235ENST00000601656 DYNC1LI2O43237 492 aaPredicted RBP10.57□□□□□ -0.72
FARP1-235ENST00000601656 DNAJA2O60884 412 aa10.57□□□□□ -0.72
FARP1-235ENST00000601656 EFCAB14O75071 495 aa10.57□□□□□ -0.72
FARP1-235ENST00000601656 SURF6O75683 361 aaKnown RBP10.57□□□□□ -0.72
FARP1-235ENST00000601656 PLCG1P19174 1290 aa10.57□□□□□ -0.72
FARP1-235ENST00000601656 RFC2P35250 354 aa10.57□□□□□ -0.72
FARP1-235ENST00000601656 KCNJ6P48051 423 aa10.57□□□□□ -0.72
FARP1-235ENST00000601656 CCDC158Q5M9N0 1113 aa10.57□□□□□ -0.72
FARP1-235ENST00000601656 IL31Q6EBC2 164 aa10.57□□□□□ -0.72
FARP1-235ENST00000601656 NSMFQ6X4W1 530 aa10.57□□□□□ -0.72
FARP1-235ENST00000601656 EP400NLQ6ZTU2 488 aa10.57□□□□□ -0.72
FARP1-235ENST00000601656 ARMCX2Q7L311 632 aa10.57□□□□□ -0.72
FARP1-235ENST00000601656 TRIM46Q7Z4K8 759 aa10.57□□□□□ -0.72
FARP1-235ENST00000601656 BRAPQ7Z569 592 aa10.57□□□□□ -0.72
FARP1-235ENST00000601656 CLEC10AQ8IUN9 316 aa10.57□□□□□ -0.72
FARP1-235ENST00000601656 ADHFE1Q8IWW8 467 aa10.57□□□□□ -0.72
FARP1-235ENST00000601656 CCDC144CPQ8IYA2 1237 aa10.57□□□□□ -0.72
FARP1-235ENST00000601656 GSTCDQ8NEC7 633 aa10.57□□□□□ -0.72
FARP1-235ENST00000601656 REPS2Q8NFH8 660 aa10.57□□□□□ -0.72
FARP1-235ENST00000601656 YTHDC1Q96MU7 727 aaKnown RBP10.57□□□□□ -0.72
FARP1-235ENST00000601656 TGS1Q96RS0 853 aaKnown RBP10.57□□□□□ -0.72
FARP1-235ENST00000601656 MENTQ9BUN1 341 aa10.57□□□□□ -0.72
FARP1-235ENST00000601656 TCF7L1Q9HCS4 588 aa10.57□□□□□ -0.72
FARP1-235ENST00000601656 PTPRHQ9HD43 1115 aa10.57□□□□□ -0.72
FARP1-235ENST00000601656 PIH1D3Q9NQM4 214 aaKnown RBP10.57□□□□□ -0.72
FARP1-235ENST00000601656 MUTYHQ9UIF7 546 aa10.57□□□□□ -0.72
FARP1-235ENST00000601656 PPP1R9AQ9ULJ8 1098 aa10.57□□□□□ -0.72
FARP1-235ENST00000601656 APOBEC2Q9Y235 224 aaKnown RBP10.57□□□□□ -0.72
FARP1-235ENST00000601656 RIPK3Q9Y572 518 aa10.57□□□□□ -0.72
FARP1-235ENST00000601656 SIP14410 1827 aa10.56□□□□□ -0.72
FARP1-235ENST00000601656 ANO9A1A5B4 782 aa10.56□□□□□ -0.72
FARP1-235ENST00000601656 NEMP1O14524 444 aa10.56□□□□□ -0.72
FARP1-235ENST00000601656 PRODHO43272 600 aa10.56□□□□□ -0.72
FARP1-235ENST00000601656 OPA1O60313 960 aa10.56□□□□□ -0.72
FARP1-235ENST00000601656 SMNDC1O75940 238 aaKnown RBP eCLIP10.56□□□□□ -0.72
FARP1-235ENST00000601656 GSTP1P09211 210 aaKnown RBP10.56□□□□□ -0.72
FARP1-235ENST00000601656 IQCF3P0C7M6 154 aa10.56□□□□□ -0.72
FARP1-235ENST00000601656 FLT3P36888 993 aa10.56□□□□□ -0.72
FARP1-235ENST00000601656 ERVK-21P61565 698 aa10.56□□□□□ -0.72
FARP1-235ENST00000601656 ICA1Q05084 483 aa10.56□□□□□ -0.72
FARP1-235ENST00000601656 MINDY4Q4G0A6 757 aa10.56□□□□□ -0.72
FARP1-235ENST00000601656 SNRNP48Q6IEG0 339 aaKnown RBP10.56□□□□□ -0.72
FARP1-235ENST00000601656 BMP8AQ7Z5Y6 402 aa10.56□□□□□ -0.72
FARP1-235ENST00000601656 TMCO2Q7Z6W1 182 aaPredicted RBP10.56□□□□□ -0.72
FARP1-235ENST00000601656 TLK2Q86UE8 772 aa10.56□□□□□ -0.72
FARP1-235ENST00000601656 ANKRD35Q8N283 1001 aa10.56□□□□□ -0.72
FARP1-235ENST00000601656 PAF1Q8N7H5 531 aa10.56□□□□□ -0.72
FARP1-235ENST00000601656 MYRIPQ8NFW9 859 aa10.56□□□□□ -0.72
FARP1-235ENST00000601656 COG1Q8WTW3 980 aa10.56□□□□□ -0.72
FARP1-235ENST00000601656 EDAQ92838 391 aa10.56□□□□□ -0.72
FARP1-235ENST00000601656 ATOH1Q92858 354 aaPredicted RBP10.56□□□□□ -0.72
FARP1-235ENST00000601656 BHMTQ93088 406 aa10.56□□□□□ -0.72
FARP1-235ENST00000601656 OSBP2Q969R2 916 aa10.56□□□□□ -0.72
FARP1-235ENST00000601656 TEX13BQ9BXU2 312 aa10.56□□□□□ -0.72
FARP1-235ENST00000601656 KATNBL1Q9H079 304 aa10.56□□□□□ -0.72
FARP1-235ENST00000601656 CHMP4BQ9H444 224 aaKnown RBP10.56□□□□□ -0.72
FARP1-235ENST00000601656 NXF1Q9UBU9 619 aaKnown RBP10.56□□□□□ -0.72
FARP1-235ENST00000601656 STK17AQ9UEE5 414 aa10.56□□□□□ -0.72
FARP1-235ENST00000601656 SUSD2Q9UGT4 822 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms