RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 SLC38A10Q9HBR0 1119 aa11.85□□□□□ -0.51
ZNF558-207ENST00000601372 EIF3CLB5ME19 914 aaKnown RBP11.85□□□□□ -0.51
ZNF558-207ENST00000601372 CLTAP09496 248 aa11.85□□□□□ -0.51
ZNF558-207ENST00000601372 DYNLT1P63172 113 aa11.85□□□□□ -0.51
ZNF558-207ENST00000601372 ZKSCAN8Q15776 578 aaPredicted RBP11.85□□□□□ -0.51
ZNF558-207ENST00000601372 CFAP157Q5JU67 520 aa11.85□□□□□ -0.51
ZNF558-207ENST00000601372 ALS2CLQ60I27 953 aa11.85□□□□□ -0.51
ZNF558-207ENST00000601372 EIF3CQ99613 913 aaKnown RBP11.85□□□□□ -0.51
ZNF558-207ENST00000601372 TMEM39AQ9NV64 488 aa11.85□□□□□ -0.51
ZNF558-207ENST00000601372 ADCY3O60266 1144 aa11.85□□□□□ -0.51
ZNF558-207ENST00000601372 HBP1O60381 514 aa11.85□□□□□ -0.51
ZNF558-207ENST00000601372 FKBP1BP68106 108 aa11.85□□□□□ -0.51
ZNF558-207ENST00000601372 PDXDC1Q6P996 788 aa11.85□□□□□ -0.51
ZNF558-207ENST00000601372 MAIP1Q8WWC4 291 aa11.85□□□□□ -0.51
ZNF558-207ENST00000601372 TRIM9Q9C026 710 aa11.85□□□□□ -0.51
ZNF558-207ENST00000601372 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.85□□□□□ -0.51
ZNF558-207ENST00000601372 GOLGA8SH3BPF8 625 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 GBP1P32455 592 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 ZNF394Q53GI3 561 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 EARS2Q5JPH6 523 aaKnown RBP11.84□□□□□ -0.51
ZNF558-207ENST00000601372 SREK1Q8WXA9 508 aaKnown RBP11.84□□□□□ -0.51
ZNF558-207ENST00000601372 RIN2Q8WYP3 895 aaPredicted RBP11.84□□□□□ -0.51
ZNF558-207ENST00000601372 XPNPEP3Q9NQH7 507 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 MYMKA6NI61 221 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 ITIH3Q06033 890 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 EMC2Q15006 297 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 LY6KQ17RY6 165 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 TEX2Q8IWB9 1127 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 INTS9Q9NV88 658 aaKnown RBP11.84□□□□□ -0.51
ZNF558-207ENST00000601372 ZNF148Q9UQR1 794 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 SGK1O00141 431 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 APBA1Q02410 837 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 C1orf228Q6PIY5 440 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.84□□□□□ -0.51
ZNF558-207ENST00000601372 AFG1LQ8WV93 481 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 STMN2Q93045 179 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 MAFGO15525 162 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 HAUS1Q96CS2 278 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 DGKZQ13574 1117 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 TMED2Q15363 201 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 PAN2Q504Q3 1202 aaKnown RBP11.84□□□□□ -0.51
ZNF558-207ENST00000601372 PPP1R12CQ9BZL4 782 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 HPSEQ9Y251 543 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 A0A1W2PQC6 194 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 PLEKP08567 350 aaPredicted RBP11.84□□□□□ -0.51
ZNF558-207ENST00000601372 ITGA4P13612 1032 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 ACTR2P61160 394 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 KCNB1Q14721 858 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 KNOP1Q1ED39 458 aaKnown RBP11.84□□□□□ -0.51
ZNF558-207ENST00000601372 C10orf76Q5T2E6 689 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 ZNF746Q6NUN9 644 aaPredicted RBP11.84□□□□□ -0.51
ZNF558-207ENST00000601372 CEP128Q6ZU80 1094 aa11.84□□□□□ -0.51
ZNF558-207ENST00000601372 MAGED2Q9UNF1 606 aaPredicted RBP11.84□□□□□ -0.51
ZNF558-207ENST00000601372 ITIH6Q6UXX5 1313 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 BFSP2Q13515 415 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 GLYCTKQ8IVS8 523 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 RIC1Q4ADV7 1423 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 PVALEFA0A1B0GWK0 134 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 STRNO43815 780 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 GCLMP48507 274 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 OR6B2Q6IFH4 312 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 SHCBP1Q8NEM2 672 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 GANCQ8TET4 914 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 GPRASP2Q96D09 838 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 KIAA1586Q9HCI6 787 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 CCDC160A6NGH7 325 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 RNF8O76064 485 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 PCK1P35558 622 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 XRRA1Q6P2D8 792 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 C4orf50Q6ZRC1 276 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 CTAGE3PQ8IX95 158 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 UNC45AQ9H3U1 944 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 ECEL1O95672 775 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 EFNA5P52803 228 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 NCAPHQ15003 741 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 PPP4R3CPQ6ZMV5 832 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 EFCAB13Q8IY85 973 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 ZMYND12Q9H0C1 365 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 FAM217BQ9NTX9 383 aaPredicted RBP11.83□□□□□ -0.52
ZNF558-207ENST00000601372 PLCH1Q4KWH8 1693 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 RAG1P15918 1043 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 XPAP23025 273 aaPredicted RBP11.83□□□□□ -0.52
ZNF558-207ENST00000601372 OR1G1P47890 313 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 CROCCP2Q86T23 111 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 NOA1Q8NC60 698 aaKnown RBP11.83□□□□□ -0.52
ZNF558-207ENST00000601372 WHAMMQ8TF30 809 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 FAM81BQ96LP2 452 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 DDX47Q9H0S4 455 aaKnown RBP11.83□□□□□ -0.52
ZNF558-207ENST00000601372 EHD2Q9NZN4 543 aa11.83□□□□□ -0.52
ZNF558-207ENST00000601372 EYA4O95677 639 aa11.82□□□□□ -0.52
ZNF558-207ENST00000601372 SMARCA1P28370 1054 aa11.82□□□□□ -0.52
ZNF558-207ENST00000601372 PASD1Q8IV76 773 aa11.82□□□□□ -0.52
ZNF558-207ENST00000601372 PNKPQ96T60 521 aa11.82□□□□□ -0.52
ZNF558-207ENST00000601372 FMO2Q99518 471 aa11.82□□□□□ -0.52
ZNF558-207ENST00000601372 CPSF3Q9UKF6 684 aaKnown RBP11.82□□□□□ -0.52
ZNF558-207ENST00000601372 SNX24Q9Y343 169 aa11.82□□□□□ -0.52
ZNF558-207ENST00000601372 SPDYE16A6NNV3 312 aaPredicted RBP11.82□□□□□ -0.52
ZNF558-207ENST00000601372 CIB2O75838 187 aa11.82□□□□□ -0.52
ZNF558-207ENST00000601372 ACSL3O95573 720 aa11.82□□□□□ -0.52
ZNF558-207ENST00000601372 NTRK3Q16288 839 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms