RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 CXCL14O95715 111 aa11.33□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 GALTP07902 379 aa11.33□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 HOXB8P17481 243 aaPredicted RBP11.33□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 TMOD1P28289 359 aa11.33□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 SFNP31947 248 aa11.33□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 FGD1P98174 961 aa11.33□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 PTPN14Q15678 1187 aa11.33□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 XKR3Q5GH77 459 aa11.33□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 EARS2Q5JPH6 523 aaKnown RBP11.33□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 RHPN2Q8IUC4 686 aa11.33□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 IGSF21Q96ID5 467 aa11.33□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 SCLT1Q96NL6 688 aa11.33□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 SH3GLB2Q9NR46 395 aa11.33□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 BMP2KQ9NSY1 1161 aaPredicted RBP11.33□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 SUCLA2Q9P2R7 463 aaPredicted RBP11.33□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 TCEAL9Q9UHQ7 104 aa11.33□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 PCDHA4Q9UN74 947 aa11.33□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 KCNJ14Q9UNX9 436 aa11.33□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 PIN4Q9Y237 131 aaKnown RBP11.33□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 INPP5FQ9Y2H2 1132 aa11.33□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 IRAK3Q9Y616 596 aa11.33□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 ITPR3Q14573 2671 aa11.33□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 VWA8A3KMH1 1905 aa11.33□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 MIA3Q5JRA6 1907 aa11.33□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 PATJQ8NI35 1801 aa11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 FSD2A1L4K1 749 aa11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 TMEM8BA6NDV4 472 aa11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 FAM205CA6NFA0 338 aa11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 ZBTB39O15060 712 aa11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 LILRB3O75022 631 aa11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 CTSAP10619 480 aa11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 HOXA11P31270 313 aaPredicted RBP11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 NLRP5P59047 1200 aa11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 KRT17Q04695 432 aa11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 INF2Q27J81 1249 aa11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 TWF2Q6IBS0 349 aaKnown RBP11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 KIAA1841Q6NSI8 718 aa11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 DDX53Q86TM3 631 aaKnown RBP11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 BLIDQ8IZY5 108 aa11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 DAGLBQ8NCG7 672 aa11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 BICD2Q8TD16 824 aa11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 SECISBP2LQ93073 1101 aaKnown RBP11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 TMEM169Q96HH4 297 aa11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 NLRP4Q96MN2 994 aa11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 MRPL9Q9BYD2 267 aaKnown RBP11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 GCOM2Q9BZD3 368 aaPredicted RBP11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 ZSWIM6Q9HCJ5 1215 aa11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 PARD6AQ9NPB6 346 aa11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 AGPAT5Q9NUQ2 364 aa11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 MARCH5Q9NX47 278 aa11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 LAMA1P25391 3075 aa11.32□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 TICRRQ7Z2Z1 1910 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 COL12A1Q99715 3063 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 TRIP11Q15643 1979 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 DDX11L8A8MPP1 907 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 N4BP1O75113 896 aaKnown RBP11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 ZNF623O75123 536 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 EFEMP2O95967 443 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 SRGAP2BP0DMP2 458 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 CA8P35219 290 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 ITIH3Q06033 890 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 SPIRE1Q08AE8 756 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 TPRNQ4KMQ1 711 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 NOMO2Q5JPE7 1267 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 POTEGQ6S5H5 508 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 TMC5Q6UXY8 1006 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 RUFY3Q7L099 469 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 ZNF410Q86VK4 478 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 RDM1Q8NG50 284 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 OXER1Q8TDS5 423 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 HAS1Q92839 578 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 KIF12Q96FN5 646 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 GBP3Q9H0R5 595 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 KCNMB3Q9NPA1 279 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 CHST12Q9NRB3 414 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 DACT1Q9NYF0 836 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 MYH15Q9Y2K3 1946 aa11.31□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 CELSR3Q9NYQ7 3312 aa11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 NOTCH4Q99466 2003 aa11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 WNT7AO00755 349 aa11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 KRT38O76015 456 aa11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 SSBP05455 408 aaKnown RBP eCLIP11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 CNPP09543 421 aaKnown RBP11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 SFPQP23246 707 aaKnown RBP eCLIP11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 ALDH7A1P49419 539 aaKnown RBP11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 CLCN4P51793 760 aa11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 AKAP17AQ02040 695 aaKnown RBP11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 STK3Q13188 491 aa11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 PPP2R5CQ13362 524 aa11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 MOXD1Q6UVY6 613 aa11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 TAS1R1Q7RTX1 841 aa11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 CATSPER4Q7RTX7 472 aa11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 MRPL10Q7Z7H8 261 aaKnown RBP11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 RNF168Q8IYW5 571 aaPredicted RBP11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 ZDHHC14Q8IZN3 488 aa11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 ZNF710Q8N1W2 664 aa11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 SMG8Q8ND04 991 aaKnown RBP11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 TMEM143Q96AN5 459 aa11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 KLHL5Q96PQ7 755 aa11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 TMEM121BQ9BXQ6 578 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms