RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 AKT3Q9Y243 479 aa19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 EPHB6O15197 1021 aa19.22■□□□□ 0.67
SHKBP1-224ENST00000600718 N4BP1O75113 896 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-224ENST00000600718 PHKA2P46019 1235 aa19.22■□□□□ 0.67
SHKBP1-224ENST00000600718 CYP26C1Q6V0L0 522 aa19.22■□□□□ 0.67
SHKBP1-224ENST00000600718 CACNA2D4Q7Z3S7 1137 aa19.22■□□□□ 0.67
SHKBP1-224ENST00000600718 USP37Q86T82 979 aa19.22■□□□□ 0.67
SHKBP1-224ENST00000600718 AGO2Q9UKV8 859 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-224ENST00000600718 SIP14410 1827 aa19.22■□□□□ 0.67
SHKBP1-224ENST00000600718 A0A0B4J269 797 aa19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 ZNF233A6NK53 670 aa19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 P4HA2O15460 535 aa19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 NOL4O94818 638 aa19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 ADRB2P07550 413 aa19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 C6orf222P0C671 652 aaPredicted RBP19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 TRIM49P0CI25 452 aa19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 TRIM49CP0CI26 452 aa19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 RARBP10826 455 aa19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 PON1P27169 355 aa19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 CDC42EP1Q00587 391 aa19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 ARHGEF6Q15052 776 aa19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 NFRKBQ6P4R8 1299 aa19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 LMBR1Q8WVP7 490 aa19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 ERO1AQ96HE7 468 aa19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 NUCKS1Q9H1E3 243 aaKnown RBP19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 USP20Q9Y2K6 914 aa19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 ACKR2O00590 384 aa19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 TOM1L1O75674 476 aa19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 SLC9A1P19634 815 aa19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 CHMP4BP1P59074 171 aa19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 PURAQ00577 322 aaKnown RBP19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 TRIM32Q13049 653 aa19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 KIAA0319LQ8IZA0 1049 aa19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 ZBTB45Q96K62 511 aaPredicted RBP19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 ACO2Q99798 780 aaKnown RBP19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 FAM213AQ9BRX8 229 aa19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 IFT122Q9HBG6 1241 aa19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 SAGE1Q9NXZ1 904 aa19.21■□□□□ 0.67
SHKBP1-224ENST00000600718 CASP8AP2Q9UKL3 1982 aa19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 MBLAC1A4D2B0 266 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 INO80B-WBP1J3KQ70 363 aa19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 PMM2O15305 246 aa19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 ZEB2O60315 1214 aa19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 EDN1P05305 212 aa19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 HNRNPH3P31942 346 aaKnown RBP19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 MATR3P43243 847 aaKnown RBP eCLIP19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 DLG4P78352 724 aa19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 HTRA3P83110 453 aa19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 CYP24A1Q07973 514 aa19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 CETN1Q12798 172 aa19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 MEA1Q16626 185 aa19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 FAM187BQ17R55 369 aa19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 GNASQ5JWF2 1037 aa19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 E4F1Q66K89 784 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 DPY19L2P1Q6NXN4 242 aa19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 CCAR2Q8N163 923 aaKnown RBP19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 PLEKHO2Q8TD55 490 aa19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 PARD3BQ8TEW8 1205 aa19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 BAP1Q92560 729 aa19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 INO80BQ9C086 356 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 GANQ9H2C0 597 aa19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 PRMT7Q9NVM4 692 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 GCNT4Q9P109 453 aa19.2■□□□□ 0.66
SHKBP1-224ENST00000600718 SMIM35A0A1B0GVV1 85 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 CLDN3O15551 220 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 CCP110O43303 1012 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 FKTNO75072 461 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 ELNP15502 786 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 POLR2FP61218 127 aaKnown RBP19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 MYL7Q01449 175 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 MBTD1Q05BQ5 628 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 CBWD6Q4V339 395 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 CBWD3Q5JTY5 395 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 CBWD5Q5RIA9 395 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 C1orf220Q5T0J3 134 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 KLHDC7AQ5VTJ3 777 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 ZNF410Q86VK4 478 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 PXYLP1Q8TE99 480 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 MTG1Q9BT17 334 aaPredicted RBP19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 MSTO1Q9BUK6 570 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 HAPLN2Q9GZV7 340 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 FBXL5Q9UKA1 691 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 PLAGL2Q9UPG8 496 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 A0A087WZ62 844 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 SOWAHDA6NJG2 315 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 VTNP04004 478 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 HMGCRP04035 888 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 GNAT1P11488 350 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 PRKAR2AP13861 404 aaKnown RBP19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 GTF2H1P32780 548 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 ADAM17P78536 824 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 CDK17Q00537 523 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 PRPF4BQ13523 1007 aaKnown RBP19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 TSHZ1Q6ZSZ6 1077 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 RRAGAQ7L523 313 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 RAET1EQ8TD07 263 aa19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 SYN2Q92777 582 aaPredicted RBP19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 ZNF668Q96K58 619 aaPredicted RBP19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 FDXACB1Q9BRP7 624 aaPredicted RBP19.19■□□□□ 0.66
SHKBP1-224ENST00000600718 ANKFY1Q9P2R3 1169 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms