RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 CMTR2Q8IYT2 770 aaKnown RBP16.06■□□□□ 0.16
LTBP4-228ENST00000600499 SMG8Q8ND04 991 aaKnown RBP16.06■□□□□ 0.16
LTBP4-228ENST00000600499 TIFAQ96CG3 184 aa16.06■□□□□ 0.16
LTBP4-228ENST00000600499 CPB2Q96IY4 423 aa16.06■□□□□ 0.16
LTBP4-228ENST00000600499 ZBED2Q9BTP6 218 aa16.06■□□□□ 0.16
LTBP4-228ENST00000600499 MRPL4Q9BYD3 311 aaKnown RBP16.06■□□□□ 0.16
LTBP4-228ENST00000600499 PANK4Q9NVE7 773 aa16.06■□□□□ 0.16
LTBP4-228ENST00000600499 TBX20Q9UMR3 447 aa16.06■□□□□ 0.16
LTBP4-228ENST00000600499 GTPBP6O43824 516 aaPredicted RBP16.05■□□□□ 0.16
LTBP4-228ENST00000600499 KLRC4O43908 158 aa16.05■□□□□ 0.16
LTBP4-228ENST00000600499 UPP2O95045 317 aa16.05■□□□□ 0.16
LTBP4-228ENST00000600499 LINC00271P0C7V0 271 aa16.05■□□□□ 0.16
LTBP4-228ENST00000600499 MYOGP15173 224 aa16.05■□□□□ 0.16
LTBP4-228ENST00000600499 NMT1P30419 496 aaKnown RBP16.05■□□□□ 0.16
LTBP4-228ENST00000600499 COASYQ13057 564 aa16.05■□□□□ 0.16
LTBP4-228ENST00000600499 CUL4BQ13620 913 aa16.05■□□□□ 0.16
LTBP4-228ENST00000600499 ALCAMQ13740 583 aa16.05■□□□□ 0.16
LTBP4-228ENST00000600499 HERC4Q5GLZ8 1057 aaPredicted RBP16.05■□□□□ 0.16
LTBP4-228ENST00000600499 ATF7IP2Q5U623 682 aa16.05■□□□□ 0.16
LTBP4-228ENST00000600499 KANK3Q6NY19 840 aa16.05■□□□□ 0.16
LTBP4-228ENST00000600499 MAP4K3Q8IVH8 894 aa16.05■□□□□ 0.16
LTBP4-228ENST00000600499 CLP1Q92989 425 aaKnown RBP16.05■□□□□ 0.16
LTBP4-228ENST00000600499 PGBD4Q96DM1 585 aa16.05■□□□□ 0.16
LTBP4-228ENST00000600499 EIF2AQ9BY44 585 aaKnown RBP16.05■□□□□ 0.16
LTBP4-228ENST00000600499 TMEM117Q9H0C3 514 aa16.05■□□□□ 0.16
LTBP4-228ENST00000600499 LRFN2Q9ULH4 789 aa16.05■□□□□ 0.16
LTBP4-228ENST00000600499 IPPQ9Y573 584 aa16.05■□□□□ 0.16
LTBP4-228ENST00000600499 SZT2Q5T011 3432 aa16.05■□□□□ 0.16
LTBP4-228ENST00000600499 LCHNA4D1U4 455 aa16.04■□□□□ 0.16
LTBP4-228ENST00000600499 K7ENM7 598 aa16.04■□□□□ 0.16
LTBP4-228ENST00000600499 GADD45BO75293 160 aaPredicted RBP16.04■□□□□ 0.16
LTBP4-228ENST00000600499 TOM1L1O75674 476 aa16.04■□□□□ 0.16
LTBP4-228ENST00000600499 CA3P07451 260 aa16.04■□□□□ 0.16
LTBP4-228ENST00000600499 IDEP14735 1019 aa16.04■□□□□ 0.16
LTBP4-228ENST00000600499 AFMP43652 599 aa16.04■□□□□ 0.16
LTBP4-228ENST00000600499 UBE2HP62256 183 aa16.04■□□□□ 0.16
LTBP4-228ENST00000600499 ASIC1P78348 528 aa16.04■□□□□ 0.16
LTBP4-228ENST00000600499 TAP1Q03518 808 aa16.04■□□□□ 0.16
LTBP4-228ENST00000600499 STRN3Q13033 797 aa16.04■□□□□ 0.16
LTBP4-228ENST00000600499 DCAF4L1Q3SXM0 396 aa16.04■□□□□ 0.16
LTBP4-228ENST00000600499 CLLU1OSQ5K130 101 aa16.04■□□□□ 0.16
LTBP4-228ENST00000600499 AGMOQ6ZNB7 445 aa16.04■□□□□ 0.16
LTBP4-228ENST00000600499 CASD1Q96PB1 797 aa16.04■□□□□ 0.16
LTBP4-228ENST00000600499 YME1L1Q96TA2 773 aa16.04■□□□□ 0.16
LTBP4-228ENST00000600499 NKX2-4Q9H2Z4 354 aa16.04■□□□□ 0.16
LTBP4-228ENST00000600499 UBN1Q9NPG3 1134 aa16.04■□□□□ 0.16
LTBP4-228ENST00000600499 STYXL1Q9Y6J8 313 aa16.04■□□□□ 0.16
LTBP4-228ENST00000600499 LINC01553A4QN01 128 aa16.03■□□□□ 0.16
LTBP4-228ENST00000600499 ARHGEF15O94989 841 aa16.03■□□□□ 0.16
LTBP4-228ENST00000600499 ERVK-21P61565 698 aa16.03■□□□□ 0.16
LTBP4-228ENST00000600499 DPYDQ12882 1025 aa16.03■□□□□ 0.16
LTBP4-228ENST00000600499 EEF1DP3Q658K8 133 aa16.03■□□□□ 0.16
LTBP4-228ENST00000600499 FAM117BQ6P1L5 589 aa16.03■□□□□ 0.16
LTBP4-228ENST00000600499 EPM2AIP1Q7L775 607 aaPredicted RBP16.03■□□□□ 0.16
LTBP4-228ENST00000600499 GRAMD1CQ8IYS0 662 aa16.03■□□□□ 0.16
LTBP4-228ENST00000600499 ADPGKQ9BRR6 497 aa16.03■□□□□ 0.16
LTBP4-228ENST00000600499 TARS2Q9BW92 718 aaKnown RBP16.03■□□□□ 0.16
LTBP4-228ENST00000600499 BLZF1Q9H2G9 400 aa16.03■□□□□ 0.16
LTBP4-228ENST00000600499 TTYH1Q9H313 450 aaPredicted RBP16.03■□□□□ 0.16
LTBP4-228ENST00000600499 ZHX3Q9H4I2 956 aa16.03■□□□□ 0.16
LTBP4-228ENST00000600499 MRPL44Q9H9J2 332 aaKnown RBP16.03■□□□□ 0.16
LTBP4-228ENST00000600499 SLC28A3Q9HAS3 691 aa16.03■□□□□ 0.16
LTBP4-228ENST00000600499 USP20Q9Y2K6 914 aa16.03■□□□□ 0.16
LTBP4-228ENST00000600499 GIT1Q9Y2X7 761 aa16.03■□□□□ 0.16
LTBP4-228ENST00000600499 PCDHB13Q9Y5F0 798 aa16.03■□□□□ 0.16
LTBP4-228ENST00000600499 MEIS3P2A8K0S8 358 aa16.02■□□□□ 0.16
LTBP4-228ENST00000600499 EIF3DO15371 548 aaKnown RBP eCLIP16.02■□□□□ 0.16
LTBP4-228ENST00000600499 OFD1O75665 1012 aa16.02■□□□□ 0.16
LTBP4-228ENST00000600499 NPTXRO95502 500 aa16.02■□□□□ 0.16
LTBP4-228ENST00000600499 MCF2P10911 925 aa16.02■□□□□ 0.16
LTBP4-228ENST00000600499 FGFR1P11362 822 aa16.02■□□□□ 0.16
LTBP4-228ENST00000600499 LIG1P18858 919 aa16.02■□□□□ 0.16
LTBP4-228ENST00000600499 CASP1P29466 404 aa16.02■□□□□ 0.16
LTBP4-228ENST00000600499 MCL1Q07820 350 aa16.02■□□□□ 0.16
LTBP4-228ENST00000600499 PSMD2Q13200 908 aa16.02■□□□□ 0.16
LTBP4-228ENST00000600499 ZC2HC1CQ53FD0 456 aaPredicted RBP16.02■□□□□ 0.16
LTBP4-228ENST00000600499 L1TD1Q5T7N2 865 aaKnown RBP16.02■□□□□ 0.16
LTBP4-228ENST00000600499 MPZL3Q6UWV2 235 aa16.02■□□□□ 0.16
LTBP4-228ENST00000600499 APBB1IPQ7Z5R6 666 aaPredicted RBP16.02■□□□□ 0.16
LTBP4-228ENST00000600499 CDR2LQ86X02 465 aaPredicted RBP16.02■□□□□ 0.16
LTBP4-228ENST00000600499 FIBCD1Q8N539 461 aa16.02■□□□□ 0.16
LTBP4-228ENST00000600499 SPATA20Q8TB22 786 aa16.02■□□□□ 0.16
LTBP4-228ENST00000600499 CCDC34Q96HJ3 373 aa16.02■□□□□ 0.16
LTBP4-228ENST00000600499 SAMD11Q96NU1 681 aa16.02■□□□□ 0.16
LTBP4-228ENST00000600499 CDT1Q9H211 546 aa16.02■□□□□ 0.16
LTBP4-228ENST00000600499 RNF39Q9H2S5 420 aa16.02■□□□□ 0.16
LTBP4-228ENST00000600499 SEMA6BQ9H3T3 888 aa16.02■□□□□ 0.16
LTBP4-228ENST00000600499 ZNF576Q9H609 170 aa16.02■□□□□ 0.16
LTBP4-228ENST00000600499 CHD9Q3L8U1 2897 aa16.02■□□□□ 0.15
LTBP4-228ENST00000600499 C5orf67F2Z3F1 127 aa16.01■□□□□ 0.15
LTBP4-228ENST00000600499 NR1I2O75469 434 aa16.01■□□□□ 0.15
LTBP4-228ENST00000600499 ITGA4P13612 1032 aa16.01■□□□□ 0.15
LTBP4-228ENST00000600499 GATMP50440 423 aa16.01■□□□□ 0.15
LTBP4-228ENST00000600499 CASP5P51878 434 aa16.01■□□□□ 0.15
LTBP4-228ENST00000600499 BTG3Q14201 252 aaPredicted RBP16.01■□□□□ 0.15
LTBP4-228ENST00000600499 KCNB1Q14721 858 aa16.01■□□□□ 0.15
LTBP4-228ENST00000600499 FAM26FQ5R3K3 315 aa16.01■□□□□ 0.15
LTBP4-228ENST00000600499 SLC39A4Q6P5W5 647 aa16.01■□□□□ 0.15
LTBP4-228ENST00000600499 HACE1Q8IYU2 909 aa16.01■□□□□ 0.15
LTBP4-228ENST00000600499 ZNF507Q8TCN5 953 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms