RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 TNFSF13BQ9Y275 285 aa18.31■□□□□ 0.52
USHBP1-210ENST00000600286 PCDHB7Q9Y5E2 793 aa18.31■□□□□ 0.52
USHBP1-210ENST00000600286 UBE4BO95155 1302 aa18.3■□□□□ 0.52
USHBP1-210ENST00000600286 CLDN3O15551 220 aa18.3■□□□□ 0.52
USHBP1-210ENST00000600286 MYBP10242 640 aa18.3■□□□□ 0.52
USHBP1-210ENST00000600286 IBSPP21815 317 aaPredicted RBP18.3■□□□□ 0.52
USHBP1-210ENST00000600286 HOXA11P31270 313 aaPredicted RBP18.3■□□□□ 0.52
USHBP1-210ENST00000600286 PPP1R2P41236 205 aa18.3■□□□□ 0.52
USHBP1-210ENST00000600286 HSP90AA2PQ14568 343 aaPredicted RBP18.3■□□□□ 0.52
USHBP1-210ENST00000600286 DSC3Q14574 896 aa18.3■□□□□ 0.52
USHBP1-210ENST00000600286 DCAF4L1Q3SXM0 396 aa18.3■□□□□ 0.52
USHBP1-210ENST00000600286 SLFN12LQ6IEE8 588 aa18.3■□□□□ 0.52
USHBP1-210ENST00000600286 Q7L0L9 218 aa18.3■□□□□ 0.52
USHBP1-210ENST00000600286 MAP4K3Q8IVH8 894 aa18.3■□□□□ 0.52
USHBP1-210ENST00000600286 MYOCDQ8IZQ8 938 aa18.3■□□□□ 0.52
USHBP1-210ENST00000600286 PHOSPHO2Q8TCD6 241 aa18.3■□□□□ 0.52
USHBP1-210ENST00000600286 FIZ1Q96SL8 496 aa18.3■□□□□ 0.52
USHBP1-210ENST00000600286 ZBED2Q9BTP6 218 aa18.3■□□□□ 0.52
USHBP1-210ENST00000600286 TARS2Q9BW92 718 aaKnown RBP18.3■□□□□ 0.52
USHBP1-210ENST00000600286 TMX1Q9H3N1 280 aa18.3■□□□□ 0.52
USHBP1-210ENST00000600286 MTMR10Q9NXD2 777 aa18.3■□□□□ 0.52
USHBP1-210ENST00000600286 A0A0U1RQF3 1178 aa18.29■□□□□ 0.52
USHBP1-210ENST00000600286 B4GALT5O43286 388 aa18.29■□□□□ 0.52
USHBP1-210ENST00000600286 TOM1L1O75674 476 aa18.29■□□□□ 0.52
USHBP1-210ENST00000600286 PRPF6O94906 941 aaKnown RBP18.29■□□□□ 0.52
USHBP1-210ENST00000600286 EOMESO95936 686 aa18.29■□□□□ 0.52
USHBP1-210ENST00000600286 SARSP49591 514 aaKnown RBP18.29■□□□□ 0.52
USHBP1-210ENST00000600286 WDR5P61964 334 aaKnown RBP18.29■□□□□ 0.52
USHBP1-210ENST00000600286 EHHADHQ08426 723 aa18.29■□□□□ 0.52
USHBP1-210ENST00000600286 KYAT1Q16773 422 aa18.29■□□□□ 0.52
USHBP1-210ENST00000600286 CCDC183Q5T5S1 534 aa18.29■□□□□ 0.52
USHBP1-210ENST00000600286 NT5DC1Q5TFE4 455 aa18.29■□□□□ 0.52
USHBP1-210ENST00000600286 HS2ST1Q7LGA3 356 aa18.29■□□□□ 0.52
USHBP1-210ENST00000600286 SPATA20Q8TB22 786 aa18.29■□□□□ 0.52
USHBP1-210ENST00000600286 GOLGA5Q8TBA6 731 aa18.29■□□□□ 0.52
USHBP1-210ENST00000600286 ZNF507Q8TCN5 953 aa18.29■□□□□ 0.52
USHBP1-210ENST00000600286 HPS3Q969F9 1004 aa18.29■□□□□ 0.52
USHBP1-210ENST00000600286 SLC9A7Q96T83 725 aa18.29■□□□□ 0.52
USHBP1-210ENST00000600286 TRAIPQ9BWF2 469 aa18.29■□□□□ 0.52
USHBP1-210ENST00000600286 UBN1Q9NPG3 1134 aa18.29■□□□□ 0.52
USHBP1-210ENST00000600286 PRUNE2Q8WUY3 3088 aa18.29■□□□□ 0.52
USHBP1-210ENST00000600286 HOXA2O43364 376 aa18.28■□□□□ 0.52
USHBP1-210ENST00000600286 PIGRP01833 764 aa18.28■□□□□ 0.52
USHBP1-210ENST00000600286 SNRPFP62306 86 aaKnown RBP18.28■□□□□ 0.52
USHBP1-210ENST00000600286 STK4Q13043 487 aa18.28■□□□□ 0.52
USHBP1-210ENST00000600286 SHHQ15465 462 aa18.28■□□□□ 0.52
USHBP1-210ENST00000600286 ZNF568Q3ZCX4 644 aa18.28■□□□□ 0.52
USHBP1-210ENST00000600286 C9orf50Q5SZB4 431 aa18.28■□□□□ 0.52
USHBP1-210ENST00000600286 ZNF658Q5TYW1 1059 aaPredicted RBP18.28■□□□□ 0.52
USHBP1-210ENST00000600286 MPZL3Q6UWV2 235 aa18.28■□□□□ 0.52
USHBP1-210ENST00000600286 TAS1R3Q7RTX0 852 aa18.28■□□□□ 0.52
USHBP1-210ENST00000600286 NPAS4Q8IUM7 802 aa18.28■□□□□ 0.52
USHBP1-210ENST00000600286 DEFB123Q8N688 67 aa18.28■□□□□ 0.52
USHBP1-210ENST00000600286 TRIML1Q8N9V2 468 aa18.28■□□□□ 0.52
USHBP1-210ENST00000600286 RNF169Q8NCN4 708 aa18.28■□□□□ 0.52
USHBP1-210ENST00000600286 VWCEQ96DN2 955 aa18.28■□□□□ 0.52
USHBP1-210ENST00000600286 STRA6Q9BX79 667 aa18.28■□□□□ 0.52
USHBP1-210ENST00000600286 GBP3Q9H0R5 595 aa18.28■□□□□ 0.52
USHBP1-210ENST00000600286 ELAC1Q9H777 363 aaKnown RBP18.28■□□□□ 0.52
USHBP1-210ENST00000600286 FAM105AQ9NUU6 356 aa18.28■□□□□ 0.52
USHBP1-210ENST00000600286 CGNQ9P2M7 1197 aaKnown RBP18.28■□□□□ 0.52
USHBP1-210ENST00000600286 PCDHB2Q9Y5E7 798 aa18.28■□□□□ 0.52
USHBP1-210ENST00000600286 TANC1Q9C0D5 1861 aa18.27■□□□□ 0.52
USHBP1-210ENST00000600286 C9IYK1 514 aa18.27■□□□□ 0.52
USHBP1-210ENST00000600286 MGEA5O60502 916 aa18.27■□□□□ 0.52
USHBP1-210ENST00000600286 PPP1R37O75864 691 aa18.27■□□□□ 0.52
USHBP1-210ENST00000600286 NPTXRO95502 500 aa18.27■□□□□ 0.52
USHBP1-210ENST00000600286 MCF2P10911 925 aa18.27■□□□□ 0.52
USHBP1-210ENST00000600286 ATP2A2P16615 1042 aaKnown RBP18.27■□□□□ 0.52
USHBP1-210ENST00000600286 FAM189BP81408 668 aa18.27■□□□□ 0.52
USHBP1-210ENST00000600286 FAM109BQ6ICB4 259 aaPredicted RBP18.27■□□□□ 0.52
USHBP1-210ENST00000600286 RTN4RL1Q86UN2 441 aaPredicted RBP18.27■□□□□ 0.52
USHBP1-210ENST00000600286 ECHDC2Q86YB7 292 aa18.27■□□□□ 0.52
USHBP1-210ENST00000600286 ABI1Q8IZP0 508 aa18.27■□□□□ 0.52
USHBP1-210ENST00000600286 ERCC4Q92889 916 aaPredicted RBP18.27■□□□□ 0.52
USHBP1-210ENST00000600286 PDZD7Q9H5P4 517 aa18.27■□□□□ 0.52
USHBP1-210ENST00000600286 TMEM161AQ9NX61 479 aa18.27■□□□□ 0.52
USHBP1-210ENST00000600286 ANKFY1Q9P2R3 1169 aa18.27■□□□□ 0.52
USHBP1-210ENST00000600286 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.26■□□□□ 0.51
USHBP1-210ENST00000600286 ZNF623O75123 536 aa18.26■□□□□ 0.51
USHBP1-210ENST00000600286 UPP2O95045 317 aa18.26■□□□□ 0.51
USHBP1-210ENST00000600286 LETM1O95202 739 aaPredicted RBP18.26■□□□□ 0.51
USHBP1-210ENST00000600286 ITGA4P13612 1032 aa18.26■□□□□ 0.51
USHBP1-210ENST00000600286 CASP5P51878 434 aa18.26■□□□□ 0.51
USHBP1-210ENST00000600286 YARSP54577 528 aaKnown RBP18.26■□□□□ 0.51
USHBP1-210ENST00000600286 NOLC1Q14978 699 aaKnown RBP eCLIP18.26■□□□□ 0.51
USHBP1-210ENST00000600286 KNOP1Q1ED39 458 aaKnown RBP18.26■□□□□ 0.51
USHBP1-210ENST00000600286 TCTN1Q2MV58 587 aa18.26■□□□□ 0.51
USHBP1-210ENST00000600286 KLHL40Q2TBA0 621 aa18.26■□□□□ 0.51
USHBP1-210ENST00000600286 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.26■□□□□ 0.51
USHBP1-210ENST00000600286 EPM2AIP1Q7L775 607 aaPredicted RBP18.26■□□□□ 0.51
USHBP1-210ENST00000600286 ZBTB33Q86T24 672 aa18.26■□□□□ 0.51
USHBP1-210ENST00000600286 NELFCDQ8IXH7 590 aa18.26■□□□□ 0.51
USHBP1-210ENST00000600286 GUF1Q8N442 669 aaKnown RBP18.26■□□□□ 0.51
USHBP1-210ENST00000600286 SCFD1Q8WVM8 642 aa18.26■□□□□ 0.51
USHBP1-210ENST00000600286 RSPH1Q8WYR4 309 aa18.26■□□□□ 0.51
USHBP1-210ENST00000600286 POMGNT1Q8WZA1 660 aa18.26■□□□□ 0.51
USHBP1-210ENST00000600286 TOP1MTQ969P6 601 aa18.26■□□□□ 0.51
USHBP1-210ENST00000600286 CCDC94Q9BW85 323 aaPredicted RBP18.26■□□□□ 0.51
USHBP1-210ENST00000600286 MAN1B1Q9UKM7 699 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms