RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 NOTUMQ6P988 496 aa15.12■□□□□ 0.01
VRK3-219ENST00000600137 UNC13DQ70J99 1090 aa15.12■□□□□ 0.01
VRK3-219ENST00000600137 FAM178BQ8IXR5 827 aa15.12■□□□□ 0.01
VRK3-219ENST00000600137 CEP57L1Q8IYX8 460 aa15.12■□□□□ 0.01
VRK3-219ENST00000600137 CCDC51Q96ER9 411 aa15.12■□□□□ 0.01
VRK3-219ENST00000600137 ZBTB45Q96K62 511 aaPredicted RBP15.12■□□□□ 0.01
VRK3-219ENST00000600137 TARS2Q9BW92 718 aaKnown RBP15.12■□□□□ 0.01
VRK3-219ENST00000600137 HAPLN2Q9GZV7 340 aa15.12■□□□□ 0.01
VRK3-219ENST00000600137 RNF39Q9H2S5 420 aa15.12■□□□□ 0.01
VRK3-219ENST00000600137 IKZF4Q9H2S9 585 aa15.12■□□□□ 0.01
VRK3-219ENST00000600137 ZHX3Q9H4I2 956 aa15.12■□□□□ 0.01
VRK3-219ENST00000600137 TBX20Q9UMR3 447 aa15.12■□□□□ 0.01
VRK3-219ENST00000600137 TNFSF13BQ9Y275 285 aa15.12■□□□□ 0.01
VRK3-219ENST00000600137 PCDHB2Q9Y5E7 798 aa15.12■□□□□ 0.01
VRK3-219ENST00000600137 TRANK1O15050 2925 aa15.12■□□□□ 0.01
VRK3-219ENST00000600137 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.11■□□□□ 0.01
VRK3-219ENST00000600137 GOLGA6L4A6NEF3 574 aa15.11■□□□□ 0.01
VRK3-219ENST00000600137 GTPBP6O43824 516 aaPredicted RBP15.11■□□□□ 0.01
VRK3-219ENST00000600137 PIGRP01833 764 aa15.11■□□□□ 0.01
VRK3-219ENST00000600137 HOXD13P35453 343 aa15.11■□□□□ 0.01
VRK3-219ENST00000600137 ASIC1P78348 528 aa15.11■□□□□ 0.01
VRK3-219ENST00000600137 KCNA1Q09470 495 aa15.11■□□□□ 0.01
VRK3-219ENST00000600137 DPYDQ12882 1025 aa15.11■□□□□ 0.01
VRK3-219ENST00000600137 CSPP1Q1MSJ5 1256 aa15.11■□□□□ 0.01
VRK3-219ENST00000600137 CLLU1OSQ5K130 101 aa15.11■□□□□ 0.01
VRK3-219ENST00000600137 SLC39A4Q6P5W5 647 aa15.11■□□□□ 0.01
VRK3-219ENST00000600137 AGMOQ6ZNB7 445 aa15.11■□□□□ 0.01
VRK3-219ENST00000600137 EPM2AIP1Q7L775 607 aaPredicted RBP15.11■□□□□ 0.01
VRK3-219ENST00000600137 SPRED2Q7Z698 418 aa15.11■□□□□ 0.01
VRK3-219ENST00000600137 CCDC65Q8IXS2 484 aa15.11■□□□□ 0.01
VRK3-219ENST00000600137 CNNM3Q8NE01 707 aa15.11■□□□□ 0.01
VRK3-219ENST00000600137 LPPQ93052 612 aa15.11■□□□□ 0.01
VRK3-219ENST00000600137 TIGD1Q96MW7 591 aa15.11■□□□□ 0.01
VRK3-219ENST00000600137 TBC1D7Q9P0N9 293 aa15.11■□□□□ 0.01
VRK3-219ENST00000600137 INSL6Q9Y581 213 aa15.11■□□□□ 0.01
VRK3-219ENST00000600137 TLL1O43897 1013 aa15.1■□□□□ 0.01
VRK3-219ENST00000600137 STAG3L1P0CL83 205 aa15.1■□□□□ 0.01
VRK3-219ENST00000600137 MYBP10242 640 aa15.1■□□□□ 0.01
VRK3-219ENST00000600137 FGFR1P11362 822 aa15.1■□□□□ 0.01
VRK3-219ENST00000600137 DNAJB2P25686 324 aa15.1■□□□□ 0.01
VRK3-219ENST00000600137 AFF1P51825 1210 aaKnown RBP15.1■□□□□ 0.01
VRK3-219ENST00000600137 UBE2HP62256 183 aa15.1■□□□□ 0.01
VRK3-219ENST00000600137 ATF7IP2Q5U623 682 aa15.1■□□□□ 0.01
VRK3-219ENST00000600137 SLC27A1Q6PCB7 646 aa15.1■□□□□ 0.01
VRK3-219ENST00000600137 MAP4K3Q8IVH8 894 aa15.1■□□□□ 0.01
VRK3-219ENST00000600137 ELOA2Q8IYF1 753 aaPredicted RBP15.1■□□□□ 0.01
VRK3-219ENST00000600137 CASD1Q96PB1 797 aa15.1■□□□□ 0.01
VRK3-219ENST00000600137 MRPL4Q9BYD3 311 aaKnown RBP15.1■□□□□ 0.01
VRK3-219ENST00000600137 NKX2-4Q9H2Z4 354 aa15.1■□□□□ 0.01
VRK3-219ENST00000600137 TTYH1Q9H313 450 aaPredicted RBP15.1■□□□□ 0.01
VRK3-219ENST00000600137 HES2Q9Y543 173 aa15.1■□□□□ 0.01
VRK3-219ENST00000600137 IPPQ9Y573 584 aa15.1■□□□□ 0.01
VRK3-219ENST00000600137 PCDHB7Q9Y5E2 793 aa15.1■□□□□ 0.01
VRK3-219ENST00000600137 ANKRD63C9JTQ0 380 aa15.09■□□□□ 0.01
VRK3-219ENST00000600137 H0YCG3 227 aa15.09■□□□□ 0.01
VRK3-219ENST00000600137 K7ENM7 598 aa15.09■□□□□ 0.01
VRK3-219ENST00000600137 N4BP3O15049 544 aa15.09■□□□□ 0.01
VRK3-219ENST00000600137 NPTXRO95502 500 aa15.09■□□□□ 0.01
VRK3-219ENST00000600137 MYL1P05976 194 aa15.09■□□□□ 0.01
VRK3-219ENST00000600137 CA3P07451 260 aa15.09■□□□□ 0.01
VRK3-219ENST00000600137 SCP2P22307 547 aa15.09■□□□□ 0.01
VRK3-219ENST00000600137 RAB27AP51159 221 aa15.09■□□□□ 0.01
VRK3-219ENST00000600137 TAP1Q03518 808 aa15.09■□□□□ 0.01
VRK3-219ENST00000600137 NCBP1Q09161 790 aaKnown RBP15.09■□□□□ 0.01
VRK3-219ENST00000600137 KMT5BQ4FZB7 885 aa15.09■□□□□ 0.01
VRK3-219ENST00000600137 ZPBP2Q6X784 338 aa15.09■□□□□ 0.01
VRK3-219ENST00000600137 LRRC55Q6ZSA7 311 aa15.09■□□□□ 0.01
VRK3-219ENST00000600137 GSTCDQ8NEC7 633 aa15.09■□□□□ 0.01
VRK3-219ENST00000600137 SPATA20Q8TB22 786 aa15.09■□□□□ 0.01
VRK3-219ENST00000600137 ZBED2Q9BTP6 218 aa15.09■□□□□ 0.01
VRK3-219ENST00000600137 CXCL16Q9H2A7 254 aa15.09■□□□□ 0.01
VRK3-219ENST00000600137 MRPL44Q9H9J2 332 aaKnown RBP15.09■□□□□ 0.01
VRK3-219ENST00000600137 MYO9BQ13459 2157 aa15.09■□□□□ 0.01
VRK3-219ENST00000600137 TRIP11Q15643 1979 aa15.09■□□□□ 0.01
VRK3-219ENST00000600137 LINC01553A4QN01 128 aa15.08■□□□□ 0
VRK3-219ENST00000600137 TISP43B9A030 160 aa15.08■□□□□ 0
VRK3-219ENST00000600137 INPPL1O15357 1258 aa15.08■□□□□ 0
VRK3-219ENST00000600137 MEFVO15553 781 aaPredicted RBP15.08■□□□□ 0
VRK3-219ENST00000600137 FAM189A1O60320 539 aa15.08■□□□□ 0
VRK3-219ENST00000600137 OFD1O75665 1012 aa15.08■□□□□ 0
VRK3-219ENST00000600137 PRPF6O94906 941 aaKnown RBP15.08■□□□□ 0
VRK3-219ENST00000600137 SKIP12755 728 aa15.08■□□□□ 0
VRK3-219ENST00000600137 STK4Q13043 487 aa15.08■□□□□ 0
VRK3-219ENST00000600137 RAB30Q15771 203 aa15.08■□□□□ 0
VRK3-219ENST00000600137 FAM26FQ5R3K3 315 aa15.08■□□□□ 0
VRK3-219ENST00000600137 KANK3Q6NY19 840 aa15.08■□□□□ 0
VRK3-219ENST00000600137 CEP120Q8N960 986 aa15.08■□□□□ 0
VRK3-219ENST00000600137 SLC17A8Q8NDX2 589 aa15.08■□□□□ 0
VRK3-219ENST00000600137 ZNF507Q8TCN5 953 aa15.08■□□□□ 0
VRK3-219ENST00000600137 HVCN1Q96D96 273 aa15.08■□□□□ 0
VRK3-219ENST00000600137 CDT1Q9H211 546 aa15.08■□□□□ 0
VRK3-219ENST00000600137 NXF3Q9H4D5 531 aaKnown RBP15.08■□□□□ 0
VRK3-219ENST00000600137 MIOSQ9NXC5 875 aa15.08■□□□□ 0
VRK3-219ENST00000600137 HCSTQ9UBK5 93 aa15.08■□□□□ 0
VRK3-219ENST00000600137 MSRAQ9UJ68 235 aa15.08■□□□□ 0
VRK3-219ENST00000600137 STYXL1Q9Y6J8 313 aa15.08■□□□□ 0
VRK3-219ENST00000600137 CDH23Q9H251 3354 aa15.08■□□□□ 0
VRK3-219ENST00000600137 TOM1L1O75674 476 aa15.07■□□□□ 0
VRK3-219ENST00000600137 RPN1P04843 607 aaKnown RBP15.07■□□□□ 0
VRK3-219ENST00000600137 IBSPP21815 317 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms