RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 H2AFZP0C0S5 128 aa15.68■□□□□ 0.1
VRK3-217ENST00000599538 TCF7P36402 384 aaPredicted RBP15.68■□□□□ 0.1
VRK3-217ENST00000599538 MCCD1P59942 119 aaPredicted RBP15.68■□□□□ 0.1
VRK3-217ENST00000599538 TUBB4BP68371 445 aa15.68■□□□□ 0.1
VRK3-217ENST00000599538 CYP24A1Q07973 514 aa15.68■□□□□ 0.1
VRK3-217ENST00000599538 KIF22Q14807 665 aa15.68■□□□□ 0.1
VRK3-217ENST00000599538 HSDL1Q3SXM5 330 aa15.68■□□□□ 0.1
VRK3-217ENST00000599538 WDR78Q5VTH9 848 aa15.68■□□□□ 0.1
VRK3-217ENST00000599538 H2AFVQ71UI9 128 aa15.68■□□□□ 0.1
VRK3-217ENST00000599538 LRRC57Q8N9N7 239 aa15.68■□□□□ 0.1
VRK3-217ENST00000599538 ZBTB45Q96K62 511 aaPredicted RBP15.68■□□□□ 0.1
VRK3-217ENST00000599538 MFSD14AQ96MC6 490 aa15.68■□□□□ 0.1
VRK3-217ENST00000599538 PORCNQ9H237 461 aa15.68■□□□□ 0.1
VRK3-217ENST00000599538 OSGEPQ9NPF4 335 aa15.68■□□□□ 0.1
VRK3-217ENST00000599538 PRDM10Q9NQV6 1147 aa15.68■□□□□ 0.1
VRK3-217ENST00000599538 N4BP1O75113 896 aaKnown RBP15.67■□□□□ 0.1
VRK3-217ENST00000599538 DLATP10515 647 aaKnown RBP15.67■□□□□ 0.1
VRK3-217ENST00000599538 CYP2C8P10632 490 aa15.67■□□□□ 0.1
VRK3-217ENST00000599538 ABCB4P21439 1286 aa15.67■□□□□ 0.1
VRK3-217ENST00000599538 STAT5BP51692 787 aa15.67■□□□□ 0.1
VRK3-217ENST00000599538 TARBP2Q15633 366 aaKnown RBP15.67■□□□□ 0.1
VRK3-217ENST00000599538 BRDTQ58F21 947 aaPredicted RBP15.67■□□□□ 0.1
VRK3-217ENST00000599538 LMBRD2Q68DH5 695 aaPredicted RBP15.67■□□□□ 0.1
VRK3-217ENST00000599538 ZNF572Q7Z3I7 529 aaPredicted RBP15.67■□□□□ 0.1
VRK3-217ENST00000599538 VPS36Q86VN1 386 aa15.67■□□□□ 0.1
VRK3-217ENST00000599538 TAS1R2Q8TE23 839 aa15.67■□□□□ 0.1
VRK3-217ENST00000599538 ZC3H15Q8WU90 426 aaKnown RBP15.67■□□□□ 0.1
VRK3-217ENST00000599538 HNRNPLLQ8WVV9 542 aaKnown RBP15.67■□□□□ 0.1
VRK3-217ENST00000599538 NIFKQ9BYG3 293 aaKnown RBP15.67■□□□□ 0.1
VRK3-217ENST00000599538 DNAJC25-GNG10A0A024R161 153 aa15.67■□□□□ 0.1
VRK3-217ENST00000599538 LRRIQ4A6NIV6 560 aa15.67■□□□□ 0.1
VRK3-217ENST00000599538 ANXA13P27216 316 aa15.67■□□□□ 0.1
VRK3-217ENST00000599538 MARK3P27448 753 aa15.67■□□□□ 0.1
VRK3-217ENST00000599538 ARL2P36404 184 aa15.67■□□□□ 0.1
VRK3-217ENST00000599538 RNASE9P60153 205 aaKnown RBP15.67■□□□□ 0.1
VRK3-217ENST00000599538 CETN1Q12798 172 aa15.67■□□□□ 0.1
VRK3-217ENST00000599538 WDR93Q6P2C0 686 aa15.67■□□□□ 0.1
VRK3-217ENST00000599538 SV2AQ7L0J3 742 aa15.67■□□□□ 0.1
VRK3-217ENST00000599538 FBXO16Q8IX29 292 aaPredicted RBP15.67■□□□□ 0.1
VRK3-217ENST00000599538 GPD1LQ8N335 351 aa15.67■□□□□ 0.1
VRK3-217ENST00000599538 PPM1KQ8N3J5 372 aa15.67■□□□□ 0.1
VRK3-217ENST00000599538 TPCN2Q8NHX9 752 aa15.67■□□□□ 0.1
VRK3-217ENST00000599538 COPS5Q92905 334 aa15.67■□□□□ 0.1
VRK3-217ENST00000599538 RPGRIP1Q96KN7 1286 aa15.67■□□□□ 0.1
VRK3-217ENST00000599538 LRRC1Q9BTT6 524 aa15.67■□□□□ 0.1
VRK3-217ENST00000599538 TAF1DQ9H5J8 278 aaPredicted RBP15.67■□□□□ 0.1
VRK3-217ENST00000599538 SEPT11Q9NVA2 429 aaKnown RBP15.67■□□□□ 0.1
VRK3-217ENST00000599538 ZNFX1Q9P2E3 1918 aaKnown RBP15.66■□□□□ 0.1
VRK3-217ENST00000599538 TTLL13PA6NNM8 815 aa15.66■□□□□ 0.1
VRK3-217ENST00000599538 SGPL1O95470 568 aa15.66■□□□□ 0.1
VRK3-217ENST00000599538 SLC25A27O95847 323 aa15.66■□□□□ 0.1
VRK3-217ENST00000599538 MYBL2P10244 700 aa15.66■□□□□ 0.1
VRK3-217ENST00000599538 USP8P40818 1118 aa15.66■□□□□ 0.1
VRK3-217ENST00000599538 NEDD9Q14511 834 aa15.66■□□□□ 0.1
VRK3-217ENST00000599538 ZBTB41Q5SVQ8 909 aa15.66■□□□□ 0.1
VRK3-217ENST00000599538 KRT39Q6A163 491 aa15.66■□□□□ 0.1
VRK3-217ENST00000599538 METTL7BQ6UX53 244 aa15.66■□□□□ 0.1
VRK3-217ENST00000599538 GSPT2Q8IYD1 628 aaKnown RBP15.66■□□□□ 0.1
VRK3-217ENST00000599538 ZNF516Q92618 1163 aa15.66■□□□□ 0.1
VRK3-217ENST00000599538 ARHGEF26Q96DR7 871 aa15.66■□□□□ 0.1
VRK3-217ENST00000599538 PI4K2AQ9BTU6 479 aa15.66■□□□□ 0.1
VRK3-217ENST00000599538 EFCC1Q9HA90 598 aa15.66■□□□□ 0.1
VRK3-217ENST00000599538 RBM12Q9NTZ6 932 aaKnown RBP15.66■□□□□ 0.1
VRK3-217ENST00000599538 L1RE1Q9UN81 338 aa15.66■□□□□ 0.1
VRK3-217ENST00000599538 PMM2O15305 246 aa15.65■□□□□ 0.1
VRK3-217ENST00000599538 TNFAIP3P21580 790 aa15.65■□□□□ 0.1
VRK3-217ENST00000599538 ACOT2P49753 483 aa15.65■□□□□ 0.1
VRK3-217ENST00000599538 LIG4P49917 911 aa15.65■□□□□ 0.1
VRK3-217ENST00000599538 NLRP11P59045 1033 aaKnown RBP15.65■□□□□ 0.1
VRK3-217ENST00000599538 HELQQ8TDG4 1101 aa15.65■□□□□ 0.1
VRK3-217ENST00000599538 SLC7A3Q8WY07 619 aa15.65■□□□□ 0.1
VRK3-217ENST00000599538 SEPT1Q8WYJ6 367 aa15.65■□□□□ 0.1
VRK3-217ENST00000599538 TATDN2Q93075 761 aa15.65■□□□□ 0.1
VRK3-217ENST00000599538 MMP19Q99542 508 aa15.65■□□□□ 0.1
VRK3-217ENST00000599538 AGPAT1Q99943 283 aa15.65■□□□□ 0.1
VRK3-217ENST00000599538 ZNF408Q9H9D4 720 aa15.65■□□□□ 0.1
VRK3-217ENST00000599538 TMEM8AQ9HCN3 771 aa15.65■□□□□ 0.1
VRK3-217ENST00000599538 PDGFCQ9NRA1 345 aa15.65■□□□□ 0.1
VRK3-217ENST00000599538 DMGDHQ9UI17 866 aaKnown RBP15.65■□□□□ 0.1
VRK3-217ENST00000599538 COQ4Q9Y3A0 265 aa15.65■□□□□ 0.1
VRK3-217ENST00000599538 GLTPD2A6NH11 291 aa15.65■□□□□ 0.1
VRK3-217ENST00000599538 TGFB3P10600 412 aa15.65■□□□□ 0.1
VRK3-217ENST00000599538 GARTP22102 1010 aa15.65■□□□□ 0.1
VRK3-217ENST00000599538 RFX1P22670 979 aa15.65■□□□□ 0.1
VRK3-217ENST00000599538 SLC7A5Q01650 507 aa15.65■□□□□ 0.1
VRK3-217ENST00000599538 LDLRAD1Q5T700 205 aa15.65■□□□□ 0.1
VRK3-217ENST00000599538 CCDC181Q5TID7 509 aa15.65■□□□□ 0.1
VRK3-217ENST00000599538 MMGT1Q8N4V1 131 aa15.65■□□□□ 0.1
VRK3-217ENST00000599538 TMC2Q8TDI7 906 aa15.65■□□□□ 0.1
VRK3-217ENST00000599538 DHX38Q92620 1227 aaKnown RBP15.65■□□□□ 0.1
VRK3-217ENST00000599538 TARS2Q9BW92 718 aaKnown RBP15.65■□□□□ 0.1
VRK3-217ENST00000599538 THAP2Q9H0W7 228 aa15.65■□□□□ 0.1
VRK3-217ENST00000599538 MAP2K7O14733 419 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 CYP26A1O43174 497 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 CALCAP01258 141 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 NAMPTP43490 491 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 MKRN3Q13064 507 aaKnown RBP15.64■□□□□ 0.09
VRK3-217ENST00000599538 PRPF4BQ13523 1007 aaKnown RBP15.64■□□□□ 0.09
VRK3-217ENST00000599538 CAPSQ13938 189 aa15.64■□□□□ 0.09
VRK3-217ENST00000599538 KCTD2Q14681 263 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms