RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 PDLIM2Q96JY6 352 aa15.78■□□□□ 0.12
SYMPK-213ENST00000599460 AGPAT1Q99943 283 aa15.78■□□□□ 0.12
SYMPK-213ENST00000599460 CHD2O14647 1828 aaKnown RBP15.78■□□□□ 0.12
SYMPK-213ENST00000599460 SPDYE16A6NNV3 312 aaPredicted RBP15.78■□□□□ 0.12
SYMPK-213ENST00000599460 POTEAQ6S8J7 498 aa15.78■□□□□ 0.12
SYMPK-213ENST00000599460 SMC1BQ8NDV3 1235 aa15.78■□□□□ 0.12
SYMPK-213ENST00000599460 USP27XA6NNY8 438 aa15.77■□□□□ 0.12
SYMPK-213ENST00000599460 RWDD4Q6NW29 188 aaKnown RBP15.77■□□□□ 0.12
SYMPK-213ENST00000599460 MICALL1Q8N3F8 863 aa15.77■□□□□ 0.12
SYMPK-213ENST00000599460 CCHCR1Q8TD31 782 aa15.77■□□□□ 0.12
SYMPK-213ENST00000599460 CALR3Q96L12 384 aaKnown RBP15.77■□□□□ 0.12
SYMPK-213ENST00000599460 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.77■□□□□ 0.12
SYMPK-213ENST00000599460 TJP3O95049 919 aa15.77■□□□□ 0.12
SYMPK-213ENST00000599460 GCNAQ96QF7 691 aa15.77■□□□□ 0.12
SYMPK-213ENST00000599460 SPATC1LQ9H0A9 340 aa15.77■□□□□ 0.12
SYMPK-213ENST00000599460 ATP1A2P50993 1020 aa15.77■□□□□ 0.12
SYMPK-213ENST00000599460 VPS52Q8N1B4 723 aa15.77■□□□□ 0.12
SYMPK-213ENST00000599460 HEMGNQ9BXL5 484 aa15.77■□□□□ 0.12
SYMPK-213ENST00000599460 MAGED2Q9UNF1 606 aaPredicted RBP15.77■□□□□ 0.12
SYMPK-213ENST00000599460 HERVK_113P62684 666 aa15.77■□□□□ 0.11
SYMPK-213ENST00000599460 MTF1Q14872 753 aa15.77■□□□□ 0.11
SYMPK-213ENST00000599460 TMEM132DQ14C87 1099 aa15.77■□□□□ 0.11
SYMPK-213ENST00000599460 RYBPQ8N488 228 aaPredicted RBP15.77■□□□□ 0.11
SYMPK-213ENST00000599460 DNAAF3Q8N9W5 541 aa15.77■□□□□ 0.11
SYMPK-213ENST00000599460 KIF9Q9HAQ2 790 aa15.77■□□□□ 0.11
SYMPK-213ENST00000599460 LCMT1Q9UIC8 334 aa15.77■□□□□ 0.11
SYMPK-213ENST00000599460 ZRANB2O95218 330 aaKnown RBP eCLIP15.77■□□□□ 0.11
SYMPK-213ENST00000599460 MYBL1P10243 752 aa15.77■□□□□ 0.11
SYMPK-213ENST00000599460 TRIM72Q6ZMU5 477 aa15.77■□□□□ 0.11
SYMPK-213ENST00000599460 RBM41Q96IZ5 413 aaKnown RBP15.77■□□□□ 0.11
SYMPK-213ENST00000599460 PDCD2LQ9BRP1 358 aa15.77■□□□□ 0.11
SYMPK-213ENST00000599460 STK33Q9BYT3 514 aa15.77■□□□□ 0.11
SYMPK-213ENST00000599460 AGO4Q9HCK5 861 aaKnown RBP15.77■□□□□ 0.11
SYMPK-213ENST00000599460 PDE11AQ9HCR9 933 aa15.77■□□□□ 0.11
SYMPK-213ENST00000599460 IPO11Q9UI26 975 aaKnown RBP15.77■□□□□ 0.11
SYMPK-213ENST00000599460 CPA4Q9UI42 421 aa15.77■□□□□ 0.11
SYMPK-213ENST00000599460 POLIQ9UNA4 740 aa15.77■□□□□ 0.11
SYMPK-213ENST00000599460 LMO7Q8WWI1 1683 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 RSPH10B2B2RC85 870 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 ZBED1O96006 694 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 RSPH10BP0C881 870 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 NCOA4Q13772 614 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 EARS2Q5JPH6 523 aaKnown RBP15.76■□□□□ 0.11
SYMPK-213ENST00000599460 CYP4F22Q6NT55 531 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 TEX2Q8IWB9 1127 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 PARD6BQ9BYG5 372 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 PDHXO00330 501 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 CXCL11O14625 94 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 NCK2O43639 380 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 CPP00450 1065 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 SUPT20HL2P0C7V6 817 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 RNF10Q8N5U6 811 aaKnown RBP15.76■□□□□ 0.11
SYMPK-213ENST00000599460 HPSEQ9Y251 543 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 ITIH6Q6UXX5 1313 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 SYNGAP1Q96PV0 1343 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 RRN3P2A6NIE6 340 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 RPS6KA5O75582 802 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 UCHL3P15374 230 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 SDC4P31431 198 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 SNRPFP62306 86 aaKnown RBP15.76■□□□□ 0.11
SYMPK-213ENST00000599460 APBA1Q02410 837 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 DHX9Q08211 1270 aaKnown RBP15.76■□□□□ 0.11
SYMPK-213ENST00000599460 PGM5Q15124 567 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 USP50Q70EL3 339 aaPredicted RBP15.76■□□□□ 0.11
SYMPK-213ENST00000599460 PRDM5Q9NQX1 630 aaPredicted RBP15.76■□□□□ 0.11
SYMPK-213ENST00000599460 AGPAT5Q9NUQ2 364 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 TBX20Q9UMR3 447 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 ANO9A1A5B4 782 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 RBP5P82980 135 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 C4orf50Q6ZRC1 276 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 GPRC5CQ9NQ84 441 aa15.76■□□□□ 0.11
SYMPK-213ENST00000599460 PRMT7Q9NVM4 692 aaPredicted RBP15.76■□□□□ 0.11
SYMPK-213ENST00000599460 INHBAP08476 426 aa15.75■□□□□ 0.11
SYMPK-213ENST00000599460 MRPS25P82663 173 aaKnown RBP15.75■□□□□ 0.11
SYMPK-213ENST00000599460 NCAPGQ9BPX3 1015 aa15.75■□□□□ 0.11
SYMPK-213ENST00000599460 PFDN6O15212 129 aa15.75■□□□□ 0.11
SYMPK-213ENST00000599460 EXTL3O43909 919 aa15.75■□□□□ 0.11
SYMPK-213ENST00000599460 GARSP41250 739 aaKnown RBP15.75■□□□□ 0.11
SYMPK-213ENST00000599460 CCDC68Q9H2F9 335 aa15.75■□□□□ 0.11
SYMPK-213ENST00000599460 GPRC5DQ9NZD1 345 aa15.75■□□□□ 0.11
SYMPK-213ENST00000599460 PCSK1NQ9UHG2 260 aa15.75■□□□□ 0.11
SYMPK-213ENST00000599460 IP6K2Q9UHH9 426 aa15.75■□□□□ 0.11
SYMPK-213ENST00000599460 CDCA5Q96FF9 252 aa15.75■□□□□ 0.11
SYMPK-213ENST00000599460 SNX9Q9Y5X1 595 aa15.75■□□□□ 0.11
SYMPK-213ENST00000599460 PPFIA4O75335 1185 aa15.75■□□□□ 0.11
SYMPK-213ENST00000599460 MUTP22033 750 aa15.75■□□□□ 0.11
SYMPK-213ENST00000599460 KCTD16Q68DU8 428 aa15.75■□□□□ 0.11
SYMPK-213ENST00000599460 PPM1EQ8WY54 764 aa15.75■□□□□ 0.11
SYMPK-213ENST00000599460 HVCN1Q96D96 273 aa15.75■□□□□ 0.11
SYMPK-213ENST00000599460 CHP1Q99653 195 aa15.75■□□□□ 0.11
SYMPK-213ENST00000599460 TARS2Q9BW92 718 aaKnown RBP15.75■□□□□ 0.11
SYMPK-213ENST00000599460 CYTH3O43739 400 aa15.74■□□□□ 0.11
SYMPK-213ENST00000599460 SLC9A1P19634 815 aa15.74■□□□□ 0.11
SYMPK-213ENST00000599460 SGSM1Q2NKQ1 1148 aa15.74■□□□□ 0.11
SYMPK-213ENST00000599460 SLC30A10Q6XR72 485 aa15.74■□□□□ 0.11
SYMPK-213ENST00000599460 SCYL1Q96KG9 808 aa15.74■□□□□ 0.11
SYMPK-213ENST00000599460 C17orf75Q9HAS0 396 aa15.74■□□□□ 0.11
SYMPK-213ENST00000599460 MED4Q9NPJ6 270 aa15.74■□□□□ 0.11
SYMPK-213ENST00000599460 CCDC188H7C350 402 aa15.74■□□□□ 0.11
SYMPK-213ENST00000599460 GNGT1P63211 74 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms