RNA–Protein interactions for RNA: ENST00000596644.5

IRF3-211, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-211ENST00000596644 ATF7IP2Q5U623 682 aa16.49■□□□□ 0.23
IRF3-211ENST00000596644 MRPL10Q7Z7H8 261 aaKnown RBP16.49■□□□□ 0.23
IRF3-211ENST00000596644 SMG8Q8ND04 991 aaKnown RBP16.49■□□□□ 0.23
IRF3-211ENST00000596644 RSPH1Q8WYR4 309 aa16.49■□□□□ 0.23
IRF3-211ENST00000596644 DDX12PQ92771 950 aa16.49■□□□□ 0.23
IRF3-211ENST00000596644 NTPCRQ9BSD7 190 aaKnown RBP16.49■□□□□ 0.23
IRF3-211ENST00000596644 C11orf84Q9BUA3 381 aaPredicted RBP16.49■□□□□ 0.23
IRF3-211ENST00000596644 APOL6Q9BWW8 343 aa16.49■□□□□ 0.23
IRF3-211ENST00000596644 MRPL4Q9BYD3 311 aaKnown RBP16.49■□□□□ 0.23
IRF3-211ENST00000596644 CUEDC2Q9H467 287 aa16.49■□□□□ 0.23
IRF3-211ENST00000596644 RSAD1Q9HA92 442 aa16.49■□□□□ 0.23
IRF3-211ENST00000596644 TYW1Q9NV66 732 aaKnown RBP16.49■□□□□ 0.23
IRF3-211ENST00000596644 USP20Q9Y2K6 914 aa16.49■□□□□ 0.23
IRF3-211ENST00000596644 MYMKA6NI61 221 aa16.48■□□□□ 0.23
IRF3-211ENST00000596644 K7ENM7 598 aa16.48■□□□□ 0.23
IRF3-211ENST00000596644 POLR2DO15514 142 aaKnown RBP16.48■□□□□ 0.23
IRF3-211ENST00000596644 EDN1P05305 212 aa16.48■□□□□ 0.23
IRF3-211ENST00000596644 RB1P06400 928 aa16.48■□□□□ 0.23
IRF3-211ENST00000596644 LINC00271P0C7V0 271 aa16.48■□□□□ 0.23
IRF3-211ENST00000596644 LAG3P18627 525 aa16.48■□□□□ 0.23
IRF3-211ENST00000596644 ZNF131P52739 623 aa16.48■□□□□ 0.23
IRF3-211ENST00000596644 NCKAP1LP55160 1127 aa16.48■□□□□ 0.23
IRF3-211ENST00000596644 GPM6BQ13491 265 aa16.48■□□□□ 0.23
IRF3-211ENST00000596644 E2F4Q16254 413 aa16.48■□□□□ 0.23
IRF3-211ENST00000596644 NOMO2Q5JPE7 1267 aa16.48■□□□□ 0.23
IRF3-211ENST00000596644 NT5DC1Q5TFE4 455 aa16.48■□□□□ 0.23
IRF3-211ENST00000596644 AGMOQ6ZNB7 445 aa16.48■□□□□ 0.23
IRF3-211ENST00000596644 APBB1IPQ7Z5R6 666 aaPredicted RBP16.48■□□□□ 0.23
IRF3-211ENST00000596644 TMEM161BQ8NDZ6 487 aa16.48■□□□□ 0.23
IRF3-211ENST00000596644 URGCPQ8TCY9 931 aa16.48■□□□□ 0.23
IRF3-211ENST00000596644 PYM1Q9BRP8 204 aaKnown RBP16.48■□□□□ 0.23
IRF3-211ENST00000596644 PLVAPQ9BX97 442 aa16.48■□□□□ 0.23
IRF3-211ENST00000596644 LRRC27Q9C0I9 530 aa16.48■□□□□ 0.23
IRF3-211ENST00000596644 NXF3Q9H4D5 531 aaKnown RBP16.48■□□□□ 0.23
IRF3-211ENST00000596644 UBN1Q9NPG3 1134 aa16.48■□□□□ 0.23
IRF3-211ENST00000596644 HCSTQ9UBK5 93 aa16.48■□□□□ 0.23
IRF3-211ENST00000596644 HES2Q9Y543 173 aa16.48■□□□□ 0.23
IRF3-211ENST00000596644 PCDHB12Q9Y5F1 795 aa16.48■□□□□ 0.23
IRF3-211ENST00000596644 C5orf67F2Z3F1 127 aa16.47■□□□□ 0.23
IRF3-211ENST00000596644 H3BNC9 293 aa16.47■□□□□ 0.23
IRF3-211ENST00000596644 TRAK2O60296 914 aa16.47■□□□□ 0.23
IRF3-211ENST00000596644 OFD1O75665 1012 aa16.47■□□□□ 0.23
IRF3-211ENST00000596644 MAPTP10636 758 aaKnown RBP16.47■□□□□ 0.23
IRF3-211ENST00000596644 IDEP14735 1019 aa16.47■□□□□ 0.23
IRF3-211ENST00000596644 RNASELQ05823 741 aaKnown RBP16.47■□□□□ 0.23
IRF3-211ENST00000596644 DCAF4L1Q3SXM0 396 aa16.47■□□□□ 0.23
IRF3-211ENST00000596644 TPRNQ4KMQ1 711 aa16.47■□□□□ 0.23
IRF3-211ENST00000596644 EEF1DP3Q658K8 133 aa16.47■□□□□ 0.23
IRF3-211ENST00000596644 ADALQ6DHV7 355 aa16.47■□□□□ 0.23
IRF3-211ENST00000596644 TAS1R3Q7RTX0 852 aa16.47■□□□□ 0.23
IRF3-211ENST00000596644 HAUS6Q7Z4H7 955 aa16.47■□□□□ 0.23
IRF3-211ENST00000596644 FAM178BQ8IXR5 827 aa16.47■□□□□ 0.23
IRF3-211ENST00000596644 MICALL1Q8N3F8 863 aa16.47■□□□□ 0.23
IRF3-211ENST00000596644 MAFAQ8NHW3 353 aaPredicted RBP16.47■□□□□ 0.23
IRF3-211ENST00000596644 TNMDQ9H2S6 317 aa16.47■□□□□ 0.23
IRF3-211ENST00000596644 CWH43Q9H720 699 aa16.47■□□□□ 0.23
IRF3-211ENST00000596644 GDPD2Q9HCC8 539 aa16.47■□□□□ 0.23
IRF3-211ENST00000596644 PARP2Q9UGN5 583 aa16.47■□□□□ 0.23
IRF3-211ENST00000596644 KCNH3Q9ULD8 1083 aa16.47■□□□□ 0.23
IRF3-211ENST00000596644 CIZ1Q9ULV3 898 aaPredicted RBP16.47■□□□□ 0.23
IRF3-211ENST00000596644 LPXNO60711 386 aa16.46■□□□□ 0.23
IRF3-211ENST00000596644 GAP43P17677 238 aa16.46■□□□□ 0.23
IRF3-211ENST00000596644 SCP2P22307 547 aa16.46■□□□□ 0.23
IRF3-211ENST00000596644 CMA1P23946 247 aa16.46■□□□□ 0.23
IRF3-211ENST00000596644 AMPD3Q01432 767 aa16.46■□□□□ 0.23
IRF3-211ENST00000596644 PTPROQ16827 1216 aa16.46■□□□□ 0.23
IRF3-211ENST00000596644 CSPP1Q1MSJ5 1256 aa16.46■□□□□ 0.23
IRF3-211ENST00000596644 ZNF568Q3ZCX4 644 aa16.46■□□□□ 0.23
IRF3-211ENST00000596644 LRRC55Q6ZSA7 311 aa16.46■□□□□ 0.23
IRF3-211ENST00000596644 SFR1Q86XK3 245 aa16.46■□□□□ 0.23
IRF3-211ENST00000596644 THNSL1Q8IYQ7 743 aa16.46■□□□□ 0.23
IRF3-211ENST00000596644 COLGALT1Q8NBJ5 622 aa16.46■□□□□ 0.23
IRF3-211ENST00000596644 SLC17A8Q8NDX2 589 aa16.46■□□□□ 0.23
IRF3-211ENST00000596644 STAMQ92783 540 aa16.46■□□□□ 0.23
IRF3-211ENST00000596644 P2RX5Q93086 422 aa16.46■□□□□ 0.23
IRF3-211ENST00000596644 BICD1Q96G01 975 aa16.46■□□□□ 0.23
IRF3-211ENST00000596644 ACO2Q99798 780 aaKnown RBP16.46■□□□□ 0.23
IRF3-211ENST00000596644 TARS2Q9BW92 718 aaKnown RBP16.46■□□□□ 0.23
IRF3-211ENST00000596644 RNF39Q9H2S5 420 aa16.46■□□□□ 0.23
IRF3-211ENST00000596644 MAGEF1Q9HAY2 307 aa16.46■□□□□ 0.23
IRF3-211ENST00000596644 TBC1D13Q9NVG8 400 aa16.46■□□□□ 0.23
IRF3-211ENST00000596644 TNFSF13BQ9Y275 285 aa16.46■□□□□ 0.23
IRF3-211ENST00000596644 A0A1B0GVL5 298 aa16.45■□□□□ 0.22
IRF3-211ENST00000596644 PFKFB1P16118 471 aa16.45■□□□□ 0.22
IRF3-211ENST00000596644 AKAP5P24588 427 aa16.45■□□□□ 0.22
IRF3-211ENST00000596644 NMT1P30419 496 aaKnown RBP16.45■□□□□ 0.22
IRF3-211ENST00000596644 ABCD1P33897 745 aa16.45■□□□□ 0.22
IRF3-211ENST00000596644 MLH1P40692 756 aa16.45■□□□□ 0.22
IRF3-211ENST00000596644 CEP57L1Q8IYX8 460 aa16.45■□□□□ 0.22
IRF3-211ENST00000596644 KLHL23Q8NBE8 558 aa16.45■□□□□ 0.22
IRF3-211ENST00000596644 PPM1EQ8WY54 764 aa16.45■□□□□ 0.22
IRF3-211ENST00000596644 DNAJC19Q96DA6 116 aa16.45■□□□□ 0.22
IRF3-211ENST00000596644 ZNF558Q96NG5 402 aa16.45■□□□□ 0.22
IRF3-211ENST00000596644 FAM193BQ96PV7 902 aaPredicted RBP16.45■□□□□ 0.22
IRF3-211ENST00000596644 GAD1Q99259 594 aa16.45■□□□□ 0.22
IRF3-211ENST00000596644 TCHPQ9BT92 498 aa16.45■□□□□ 0.22
IRF3-211ENST00000596644 GBP3Q9H0R5 595 aa16.45■□□□□ 0.22
IRF3-211ENST00000596644 KBTBD4Q9NVX7 518 aa16.45■□□□□ 0.22
IRF3-211ENST00000596644 KANSL3Q9P2N6 904 aa16.45■□□□□ 0.22
IRF3-211ENST00000596644 SEL1LQ9UBV2 794 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms