RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 HSP90AA1P07900 732 aaKnown RBP17.72■□□□□ 0.43
USHBP1-205ENST00000595993 SPATA31C1P0DKV0 1188 aa17.72■□□□□ 0.43
USHBP1-205ENST00000595993 EPCAMP16422 314 aa17.72■□□□□ 0.43
USHBP1-205ENST00000595993 DNM2P50570 870 aa17.72■□□□□ 0.43
USHBP1-205ENST00000595993 RAB27AP51159 221 aa17.72■□□□□ 0.43
USHBP1-205ENST00000595993 NPEPPSP55786 919 aa17.72■□□□□ 0.43
USHBP1-205ENST00000595993 BMS1Q14692 1282 aaKnown RBP17.72■□□□□ 0.43
USHBP1-205ENST00000595993 NOMO2Q5JPE7 1267 aa17.72■□□□□ 0.43
USHBP1-205ENST00000595993 GLB1LQ6UWU2 654 aa17.72■□□□□ 0.43
USHBP1-205ENST00000595993 TPH2Q8IWU9 490 aa17.72■□□□□ 0.43
USHBP1-205ENST00000595993 AUTS2Q8WXX7 1259 aa17.72■□□□□ 0.43
USHBP1-205ENST00000595993 LPPQ93052 612 aa17.72■□□□□ 0.43
USHBP1-205ENST00000595993 ZSWIM4Q9H7M6 989 aa17.72■□□□□ 0.43
USHBP1-205ENST00000595993 IFT122Q9HBG6 1241 aa17.72■□□□□ 0.43
USHBP1-205ENST00000595993 SUCLA2Q9P2R7 463 aaPredicted RBP17.72■□□□□ 0.43
USHBP1-205ENST00000595993 LAD1O00515 517 aa17.71■□□□□ 0.43
USHBP1-205ENST00000595993 GFRA3O60609 400 aa17.71■□□□□ 0.43
USHBP1-205ENST00000595993 MED24O75448 989 aa17.71■□□□□ 0.43
USHBP1-205ENST00000595993 PRPHP41219 470 aa17.71■□□□□ 0.43
USHBP1-205ENST00000595993 PTPN14Q15678 1187 aa17.71■□□□□ 0.43
USHBP1-205ENST00000595993 RARS2Q5T160 578 aaKnown RBP17.71■□□□□ 0.43
USHBP1-205ENST00000595993 TWF2Q6IBS0 349 aaKnown RBP17.71■□□□□ 0.43
USHBP1-205ENST00000595993 MRPL10Q7Z7H8 261 aaKnown RBP17.71■□□□□ 0.43
USHBP1-205ENST00000595993 PLCD3Q8N3E9 789 aa17.71■□□□□ 0.43
USHBP1-205ENST00000595993 C12orf76Q8N812 135 aaPredicted RBP17.71■□□□□ 0.43
USHBP1-205ENST00000595993 TMEM105Q8N8V8 129 aa17.71■□□□□ 0.43
USHBP1-205ENST00000595993 SMOC2Q9H3U7 446 aa17.71■□□□□ 0.43
USHBP1-205ENST00000595993 AGPAT5Q9NUQ2 364 aa17.71■□□□□ 0.43
USHBP1-205ENST00000595993 DNAJB4Q9UDY4 337 aa17.71■□□□□ 0.43
USHBP1-205ENST00000595993 PIN4Q9Y237 131 aaKnown RBP17.71■□□□□ 0.43
USHBP1-205ENST00000595993 A0A087WWV3 80 aa17.7■□□□□ 0.42
USHBP1-205ENST00000595993 DKC1O60832 514 aaKnown RBP eCLIP17.7■□□□□ 0.42
USHBP1-205ENST00000595993 LILRB3O75022 631 aa17.7■□□□□ 0.42
USHBP1-205ENST00000595993 LYPLA2O95372 231 aa17.7■□□□□ 0.42
USHBP1-205ENST00000595993 WEE2P0C1S8 567 aa17.7■□□□□ 0.42
USHBP1-205ENST00000595993 YWHABP31946 246 aaKnown RBP17.7■□□□□ 0.42
USHBP1-205ENST00000595993 SLC11A1P49279 550 aa17.7■□□□□ 0.42
USHBP1-205ENST00000595993 PKP1Q13835 747 aa17.7■□□□□ 0.42
USHBP1-205ENST00000595993 ATAT1Q5SQI0 421 aa17.7■□□□□ 0.42
USHBP1-205ENST00000595993 KANK3Q6NY19 840 aa17.7■□□□□ 0.42
USHBP1-205ENST00000595993 AGMOQ6ZNB7 445 aa17.7■□□□□ 0.42
USHBP1-205ENST00000595993 PPFIBP1Q86W92 1011 aa17.7■□□□□ 0.42
USHBP1-205ENST00000595993 CATSPER3Q86XQ3 398 aa17.7■□□□□ 0.42
USHBP1-205ENST00000595993 RHPN2Q8IUC4 686 aa17.7■□□□□ 0.42
USHBP1-205ENST00000595993 KSR1Q8IVT5 923 aa17.7■□□□□ 0.42
USHBP1-205ENST00000595993 IGSF22Q8N9C0 903 aa17.7■□□□□ 0.42
USHBP1-205ENST00000595993 TDRD5Q8NAT2 981 aaKnown RBP17.7■□□□□ 0.42
USHBP1-205ENST00000595993 FEZF2Q8TBJ5 459 aa17.7■□□□□ 0.42
USHBP1-205ENST00000595993 ATOH1Q92858 354 aaPredicted RBP17.7■□□□□ 0.42
USHBP1-205ENST00000595993 JPH2Q9BR39 696 aaPredicted RBP17.7■□□□□ 0.42
USHBP1-205ENST00000595993 CYP26B1Q9NR63 512 aa17.7■□□□□ 0.42
USHBP1-205ENST00000595993 STK39Q9UEW8 545 aa17.7■□□□□ 0.42
USHBP1-205ENST00000595993 C2orf16Q68DN1 1984 aa17.7■□□□□ 0.42
USHBP1-205ENST00000595993 PP2D1A8MPX8 630 aa17.69■□□□□ 0.42
USHBP1-205ENST00000595993 H0Y858 1186 aa17.69■□□□□ 0.42
USHBP1-205ENST00000595993 ASGR2P07307 311 aa17.69■□□□□ 0.42
USHBP1-205ENST00000595993 SF3A1Q15459 793 aaKnown RBP17.69■□□□□ 0.42
USHBP1-205ENST00000595993 POTEGQ6S5H5 508 aa17.69■□□□□ 0.42
USHBP1-205ENST00000595993 CATSPER4Q7RTX7 472 aa17.69■□□□□ 0.42
USHBP1-205ENST00000595993 GPR149Q86SP6 731 aa17.69■□□□□ 0.42
USHBP1-205ENST00000595993 ZNF280BQ86YH2 543 aa17.69■□□□□ 0.42
USHBP1-205ENST00000595993 PGBD4Q96DM1 585 aa17.69■□□□□ 0.42
USHBP1-205ENST00000595993 CEP170P1Q96L14 293 aa17.69■□□□□ 0.42
USHBP1-205ENST00000595993 SNX27Q96L92 541 aa17.69■□□□□ 0.42
USHBP1-205ENST00000595993 POLR3CQ9BUI4 534 aaPredicted RBP17.69■□□□□ 0.42
USHBP1-205ENST00000595993 DHX33Q9H6R0 707 aaKnown RBP17.69■□□□□ 0.42
USHBP1-205ENST00000595993 SFXN1Q9H9B4 322 aa17.69■□□□□ 0.42
USHBP1-205ENST00000595993 TUFT1Q9NNX1 390 aa17.69■□□□□ 0.42
USHBP1-205ENST00000595993 LRWD1Q9UFC0 647 aa17.69■□□□□ 0.42
USHBP1-205ENST00000595993 PPME1Q9Y570 386 aa17.69■□□□□ 0.42
USHBP1-205ENST00000595993 CLIC4Q9Y696 253 aa17.69■□□□□ 0.42
USHBP1-205ENST00000595993 SPTBN4Q9H254 2564 aa17.69■□□□□ 0.42
USHBP1-205ENST00000595993 EFEMP2O95967 443 aa17.68■□□□□ 0.42
USHBP1-205ENST00000595993 RPA1P27694 616 aa17.68■□□□□ 0.42
USHBP1-205ENST00000595993 CDC25AP30304 524 aa17.68■□□□□ 0.42
USHBP1-205ENST00000595993 HOXA11P31270 313 aaPredicted RBP17.68■□□□□ 0.42
USHBP1-205ENST00000595993 NBL1P41271 181 aa17.68■□□□□ 0.42
USHBP1-205ENST00000595993 CLCN4P51793 760 aa17.68■□□□□ 0.42
USHBP1-205ENST00000595993 CLCN5P51795 746 aa17.68■□□□□ 0.42
USHBP1-205ENST00000595993 PDIA5Q14554 519 aa17.68■□□□□ 0.42
USHBP1-205ENST00000595993 ECM1Q16610 540 aa17.68■□□□□ 0.42
USHBP1-205ENST00000595993 XKR9Q5GH70 373 aa17.68■□□□□ 0.42
USHBP1-205ENST00000595993 UBXN11Q5T124 520 aa17.68■□□□□ 0.42
USHBP1-205ENST00000595993 FOXD4L5Q5VV16 416 aaPredicted RBP17.68■□□□□ 0.42
USHBP1-205ENST00000595993 ASTLQ6HA08 431 aaPredicted RBP17.68■□□□□ 0.42
USHBP1-205ENST00000595993 DTHD1Q6ZMT9 781 aa17.68■□□□□ 0.42
USHBP1-205ENST00000595993 PIGOQ8TEQ8 1089 aa17.68■□□□□ 0.42
USHBP1-205ENST00000595993 FOXD4L4Q8WXT5 416 aaPredicted RBP17.68■□□□□ 0.42
USHBP1-205ENST00000595993 TMEM175Q9BSA9 504 aa17.68■□□□□ 0.42
USHBP1-205ENST00000595993 BMP2KQ9NSY1 1161 aaPredicted RBP17.68■□□□□ 0.42
USHBP1-205ENST00000595993 LIMD1Q9UGP4 676 aa17.68■□□□□ 0.42
USHBP1-205ENST00000595993 DBR1Q9UK59 544 aaKnown RBP17.68■□□□□ 0.42
USHBP1-205ENST00000595993 PCDHB2Q9Y5E7 798 aa17.68■□□□□ 0.42
USHBP1-205ENST00000595993 COL4A3BPQ9Y5P4 624 aa17.68■□□□□ 0.42
USHBP1-205ENST00000595993 ZNF292O60281 2723 aa17.68■□□□□ 0.42
USHBP1-205ENST00000595993 CNTNAP2Q9UHC6 1331 aa17.68■□□□□ 0.42
USHBP1-205ENST00000595993 VWA3AA6NCI4 1184 aa17.67■□□□□ 0.42
USHBP1-205ENST00000595993 INPPL1O15357 1258 aa17.67■□□□□ 0.42
USHBP1-205ENST00000595993 DDHD2O94830 711 aa17.67■□□□□ 0.42
USHBP1-205ENST00000595993 AFF1P51825 1210 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms