RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 CDHR1Q96JP9 859 aa4.84□□□□□ -1.63
LINC00649-204ENST00000593977 UBXN10Q96LJ8 280 aa4.84□□□□□ -1.63
LINC00649-204ENST00000593977 RIPOR3Q96MK2 946 aa4.84□□□□□ -1.63
LINC00649-204ENST00000593977 UHRF1Q96T88 793 aaPredicted RBP4.84□□□□□ -1.63
LINC00649-204ENST00000593977 MYCBPQ99417 103 aaPredicted RBP4.84□□□□□ -1.63
LINC00649-204ENST00000593977 BARD1Q99728 777 aaKnown RBP4.84□□□□□ -1.63
LINC00649-204ENST00000593977 SLC26A6Q9BXS9 759 aa4.84□□□□□ -1.63
LINC00649-204ENST00000593977 KRTAP9-2Q9BYQ4 174 aa4.84□□□□□ -1.63
LINC00649-204ENST00000593977 VPS11Q9H270 941 aa4.84□□□□□ -1.63
LINC00649-204ENST00000593977 SEMA6BQ9H3T3 888 aa4.84□□□□□ -1.63
LINC00649-204ENST00000593977 EPHX3Q9H6B9 360 aa4.84□□□□□ -1.63
LINC00649-204ENST00000593977 CD248Q9HCU0 757 aa4.84□□□□□ -1.63
LINC00649-204ENST00000593977 SSU72Q9NP77 194 aaKnown RBP4.84□□□□□ -1.63
LINC00649-204ENST00000593977 GPRC5BQ9NZH0 403 aa4.84□□□□□ -1.63
LINC00649-204ENST00000593977 SAMD15Q9P1V8 674 aa4.84□□□□□ -1.63
LINC00649-204ENST00000593977 CGGBP1Q9UFW8 167 aaPredicted RBP4.84□□□□□ -1.63
LINC00649-204ENST00000593977 TTLL3Q9Y4R7 772 aa4.84□□□□□ -1.63
LINC00649-204ENST00000593977 MAGED1Q9Y5V3 778 aaPredicted RBP4.84□□□□□ -1.63
LINC00649-204ENST00000593977 USP34Q70CQ2 3546 aa4.84□□□□□ -1.63
LINC00649-204ENST00000593977 CFAP47Q6ZTR5 3102 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 ACACBO00763 2458 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 KTN1Q86UP2 1357 aaKnown RBP4.83□□□□□ -1.64
LINC00649-204ENST00000593977 NPC1L1Q9UHC9 1359 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 CDHR2Q9BYE9 1310 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 RRN3P2A6NIE6 340 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 TTC36A6NLP5 189 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 B4E1Z4 1266 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 CBX4O00257 560 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 DLX3O60479 287 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 RNGTTO60942 597 aaKnown RBP4.83□□□□□ -1.64
LINC00649-204ENST00000593977 ULK1O75385 1050 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 GLRX3O76003 335 aaKnown RBP4.83□□□□□ -1.64
LINC00649-204ENST00000593977 BAIAP3O94812 1187 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 INMTO95050 263 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 TIAF1O95411 115 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 IGHDP01880 384 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 AKAP5P24588 427 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 HOXC12P31275 282 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 HOXC13P31276 330 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 PPM1AP35813 382 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 KRT20P35900 424 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 ETV3P41162 512 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 ASPAP45381 313 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 GFRA1P56159 465 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 FKBP1BP68106 108 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 ROR1Q01973 937 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 SREBF2Q12772 1141 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 FAPQ12884 760 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 NTRK3Q16288 839 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 TMEM31Q5JXX7 168 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 NOL9Q5SY16 702 aaKnown RBP4.83□□□□□ -1.64
LINC00649-204ENST00000593977 KIAA1211Q6ZU35 1233 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 ACAD11Q709F0 780 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 MAMDC2Q7Z304 686 aaPredicted RBP4.83□□□□□ -1.64
LINC00649-204ENST00000593977 UBE3DQ7Z6J8 389 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 PTRH1Q86Y79 214 aaKnown RBP4.83□□□□□ -1.64
LINC00649-204ENST00000593977 CMIPQ8IY22 773 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 LSMEM1Q8N8F7 131 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 USP38Q8NB14 1042 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 ADCY4Q8NFM4 1077 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 DNAJB8Q8NHS0 232 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 PPP1R35Q8TAP8 253 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 XAGE3Q8WTP9 111 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 BTN2A2Q8WVV5 523 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 ATRIPQ8WXE1 791 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 MYLIPQ8WY64 445 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 KIAA1191Q96A73 305 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 HVCN1Q96D96 273 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 VWCEQ96DN2 955 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 DDX11Q96FC9 970 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 TEKT5Q96M29 485 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 FBXL18Q96ME1 805 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 KREMEN1Q96MU8 473 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 FAM193BQ96PV7 902 aaPredicted RBP4.83□□□□□ -1.64
LINC00649-204ENST00000593977 PSMG3-AS1Q96PY0 264 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 ASB2Q96Q27 587 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 SEC62Q99442 399 aaKnown RBP4.83□□□□□ -1.64
LINC00649-204ENST00000593977 ASPNQ9BXN1 380 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 BHMT2Q9H2M3 363 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 FAM204AQ9H8W3 233 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 ARFGAP3Q9NP61 516 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 ANKEF1Q9NU02 776 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 RTEL1Q9NZ71 1219 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 PRR13Q9NZ81 148 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 PCOLCE2Q9UKZ9 415 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 INVSQ9Y283 1065 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 PCDHB12Q9Y5F1 795 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 MRFAP1Q9Y605 127 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 FHOD1Q9Y613 1164 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 NCOR2Q9Y618 2525 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 C5orf42Q9H799 3197 aa4.83□□□□□ -1.64
LINC00649-204ENST00000593977 COL2A1P02458 1487 aaPredicted RBP4.82□□□□□ -1.64
LINC00649-204ENST00000593977 WDFY4Q6ZS81 3184 aa4.82□□□□□ -1.64
LINC00649-204ENST00000593977 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.82□□□□□ -1.64
LINC00649-204ENST00000593977 KRTAP9-6A0A140TA67 174 aa4.82□□□□□ -1.64
LINC00649-204ENST00000593977 FAM170AA1A519 330 aa4.82□□□□□ -1.64
LINC00649-204ENST00000593977 AREL1O15033 823 aa4.82□□□□□ -1.64
LINC00649-204ENST00000593977 PLOD3O60568 738 aa4.82□□□□□ -1.64
LINC00649-204ENST00000593977 H2AFYO75367 372 aaKnown RBP4.82□□□□□ -1.64
LINC00649-204ENST00000593977 KCNH1O95259 989 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms