RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 TOR4AQ9NXH8 423 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 MTMR4Q9NYA4 1195 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 TLR7Q9NYK1 1049 aaKnown RBP3.59□□□□□ -1.83
VRK3-204ENST00000593912 DNAJB4Q9UDY4 337 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 EVLQ9UI08 416 aaPredicted RBP3.59□□□□□ -1.83
VRK3-204ENST00000593912 POLIQ9UNA4 740 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 ST3GAL5Q9UNP4 418 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 APOBEC2Q9Y235 224 aaKnown RBP3.59□□□□□ -1.83
VRK3-204ENST00000593912 SQORQ9Y6N5 450 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 NCANO14594 1321 aa3.59□□□□□ -1.83
VRK3-204ENST00000593912 FBN1P35555 2871 aaKnown RBP3.59□□□□□ -1.84
VRK3-204ENST00000593912 SVILO95425 2214 aa3.59□□□□□ -1.84
VRK3-204ENST00000593912 PTPRDP23468 1912 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 MYLKQ15746 1914 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 EVPLQ92817 2033 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 MED13Q9UHV7 2174 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 CABIN1Q9Y6J0 2220 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 CCDC163A0A0D9SF12 145 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 MBLAC1A4D2B0 266 aaPredicted RBP3.58□□□□□ -1.84
VRK3-204ENST00000593912 B4DLN1 442 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 M0QZ92 97 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 NOP56O00567 594 aaKnown RBP3.58□□□□□ -1.84
VRK3-204ENST00000593912 TGM5O43548 720 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 PLA2G6O60733 806 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 ECI2O75521 394 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 RPS6KA5O75582 802 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 PRDM1O75626 825 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 PAPLNO95428 1278 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 TTLL1O95922 423 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 CHGBP05060 677 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 CFIP05156 583 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 ADH1AP07327 375 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 GALTP07902 379 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 ATXN1LP0C7T5 689 aaKnown RBP3.58□□□□□ -1.84
VRK3-204ENST00000593912 MYCLP12524 364 aaPredicted RBP3.58□□□□□ -1.84
VRK3-204ENST00000593912 HLA-EP13747 358 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 PDE6AP16499 860 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 CEBPBP17676 345 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 SLC11A1P49279 550 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 MRPL12P52815 198 aaKnown RBP3.58□□□□□ -1.84
VRK3-204ENST00000593912 ATXN3P54252 364 aaPredicted RBP3.58□□□□□ -1.84
VRK3-204ENST00000593912 TLE1Q04724 770 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 RNASELQ05823 741 aaKnown RBP3.58□□□□□ -1.84
VRK3-204ENST00000593912 DSC3Q14574 896 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 GRM4Q14833 912 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 PON2Q15165 354 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 IGFBP7Q16270 282 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 MAPK6Q16659 721 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 CCDC96Q2M329 555 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 LONRF3Q496Y0 759 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 CCDC157Q569K6 752 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 C2orf27AQ580R0 203 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 CCDC158Q5M9N0 1113 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 ARHGEF16Q5VV41 709 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 IER5Q5VY09 327 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 PDXDC2PQ6P474 469 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 CTR9Q6PD62 1173 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 FAM228AQ86W67 206 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 ECHDC2Q86YB7 292 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 MAP4K3Q8IVH8 894 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 EXD3Q8N9H8 876 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 SPRYD3Q8NCJ5 442 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 IL31RAQ8NI17 732 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 SYTL5Q8TDW5 730 aaPredicted RBP3.58□□□□□ -1.84
VRK3-204ENST00000593912 NSUN6Q8TEA1 469 aaKnown RBP3.58□□□□□ -1.84
VRK3-204ENST00000593912 BAP1Q92560 729 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 GMCL1Q96IK5 515 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 RMDN3Q96TC7 470 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 TPSD1Q9BZJ3 242 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 ELAC1Q9H777 363 aaKnown RBP3.58□□□□□ -1.84
VRK3-204ENST00000593912 NRDE2Q9H7Z3 1164 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 MKNK2Q9HBH9 465 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 MRPL17Q9NRX2 175 aaKnown RBP3.58□□□□□ -1.84
VRK3-204ENST00000593912 ZDHHC7Q9NXF8 308 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 SEPT9Q9UHD8 586 aaPredicted RBP3.58□□□□□ -1.84
VRK3-204ENST00000593912 SLC8A2Q9UPR5 921 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 ZNF532Q9HCE3 1301 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 NBEAL1Q6ZS30 2694 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 MYO16Q9Y6X6 1858 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 CEP192Q8TEP8 1941 aa3.58□□□□□ -1.84
VRK3-204ENST00000593912 TCRBV5S4A2TA0A5A2 114 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 A1L4Q6 167 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 BHMG1C9JSJ3 638 aaPredicted RBP3.57□□□□□ -1.84
VRK3-204ENST00000593912 HOXA2O43364 376 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 SUV39H1O43463 412 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 GAS2O43903 313 aaKnown RBP3.57□□□□□ -1.84
VRK3-204ENST00000593912 EIF3JO75822 258 aaKnown RBP3.57□□□□□ -1.84
VRK3-204ENST00000593912 LUC7L3O95232 432 aaKnown RBP3.57□□□□□ -1.84
VRK3-204ENST00000593912 MBD4O95243 580 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 URODP06132 367 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 NR3C2P08235 984 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 UBTFL1P0CB47 393 aaPredicted RBP3.57□□□□□ -1.84
VRK3-204ENST00000593912 RPL17P18621 184 aaKnown RBP3.57□□□□□ -1.84
VRK3-204ENST00000593912 APCP25054 2843 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 ZNF76P36508 570 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 PTGER3P43115 390 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 DGKEP52429 567 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 KRT76Q01546 638 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 SRSF11Q05519 484 aaKnown RBP3.57□□□□□ -1.84
VRK3-204ENST00000593912 MYO1EQ12965 1108 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms