RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 INO80B-WBP1J3KQ70 363 aa25.22■■□□□ 1.63
SSBP4-203ENST00000593641 ZBTB39O15060 712 aa25.22■■□□□ 1.63
SSBP4-203ENST00000593641 TSPAN1O60635 241 aa25.22■■□□□ 1.63
SSBP4-203ENST00000593641 CTDNEP1O95476 244 aa25.22■■□□□ 1.63
SSBP4-203ENST00000593641 CNPP09543 421 aaKnown RBP25.22■■□□□ 1.63
SSBP4-203ENST00000593641 CLCN4P51793 760 aa25.22■■□□□ 1.63
SSBP4-203ENST00000593641 NUBP1P53384 320 aa25.22■■□□□ 1.63
SSBP4-203ENST00000593641 PTENP60484 403 aa25.22■■□□□ 1.63
SSBP4-203ENST00000593641 GPR149Q86SP6 731 aa25.22■■□□□ 1.63
SSBP4-203ENST00000593641 EIF2AK1Q9BQI3 630 aaKnown RBP25.22■■□□□ 1.63
SSBP4-203ENST00000593641 PCDHA12Q9UN75 941 aa25.22■■□□□ 1.63
SSBP4-203ENST00000593641 SSX2IPQ9Y2D8 614 aa25.22■■□□□ 1.63
SSBP4-203ENST00000593641 PRG3Q9Y2Y8 225 aaPredicted RBP25.22■■□□□ 1.63
SSBP4-203ENST00000593641 C2CD2LO14523 706 aa25.21■■□□□ 1.63
SSBP4-203ENST00000593641 SLITRK3O94933 977 aa25.21■■□□□ 1.63
SSBP4-203ENST00000593641 SOD2P04179 222 aa25.21■■□□□ 1.63
SSBP4-203ENST00000593641 OR1G1P47890 313 aa25.21■■□□□ 1.63
SSBP4-203ENST00000593641 ANAPC15P60006 121 aa25.21■■□□□ 1.63
SSBP4-203ENST00000593641 CALCRLQ16602 461 aa25.21■■□□□ 1.63
SSBP4-203ENST00000593641 HACE1Q8IYU2 909 aa25.21■■□□□ 1.63
SSBP4-203ENST00000593641 SMG8Q8ND04 991 aaKnown RBP25.21■■□□□ 1.63
SSBP4-203ENST00000593641 TRIM6Q9C030 488 aaPredicted RBP25.21■■□□□ 1.63
SSBP4-203ENST00000593641 XPNPEP1Q9NQW7 623 aa25.21■■□□□ 1.63
SSBP4-203ENST00000593641 DGAT1O75907 488 aa25.2■■□□□ 1.62
SSBP4-203ENST00000593641 MLH1P40692 756 aa25.2■■□□□ 1.62
SSBP4-203ENST00000593641 AK2P54819 239 aa25.2■■□□□ 1.62
SSBP4-203ENST00000593641 ELMSAN1Q6PJG2 1045 aa25.2■■□□□ 1.62
SSBP4-203ENST00000593641 OTOP3Q7RTS5 596 aa25.2■■□□□ 1.62
SSBP4-203ENST00000593641 ATOH1Q92858 354 aaPredicted RBP25.2■■□□□ 1.62
SSBP4-203ENST00000593641 CPB2Q96IY4 423 aa25.2■■□□□ 1.62
SSBP4-203ENST00000593641 GAD1Q99259 594 aa25.2■■□□□ 1.62
SSBP4-203ENST00000593641 HERC2P3Q9BVR0 1158 aa25.2■■□□□ 1.62
SSBP4-203ENST00000593641 EIF2AQ9BY44 585 aaKnown RBP25.2■■□□□ 1.62
SSBP4-203ENST00000593641 SMOC2Q9H3U7 446 aa25.2■■□□□ 1.62
SSBP4-203ENST00000593641 FAM86C1Q9NVL1 165 aa25.2■■□□□ 1.62
SSBP4-203ENST00000593641 PLXNA3P51805 1871 aa25.19■■□□□ 1.62
SSBP4-203ENST00000593641 ARL5CA6NH57 179 aa25.19■■□□□ 1.62
SSBP4-203ENST00000593641 LILRB3O75022 631 aa25.19■■□□□ 1.62
SSBP4-203ENST00000593641 NR1I2O75469 434 aa25.19■■□□□ 1.62
SSBP4-203ENST00000593641 ADH1AP07327 375 aa25.19■■□□□ 1.62
SSBP4-203ENST00000593641 C15orf39Q6ZRI6 1047 aa25.19■■□□□ 1.62
SSBP4-203ENST00000593641 IFNLR1Q8IU57 520 aaPredicted RBP25.19■■□□□ 1.62
SSBP4-203ENST00000593641 COLGALT2Q8IYK4 626 aa25.19■■□□□ 1.62
SSBP4-203ENST00000593641 TNFRSF25Q93038 417 aa25.19■■□□□ 1.62
SSBP4-203ENST00000593641 APOL6Q9BWW8 343 aa25.19■■□□□ 1.62
SSBP4-203ENST00000593641 CSRNP2Q9H175 543 aa25.19■■□□□ 1.62
SSBP4-203ENST00000593641 MFSD1Q9H3U5 465 aa25.19■■□□□ 1.62
SSBP4-203ENST00000593641 TTC12Q9H892 705 aaPredicted RBP25.19■■□□□ 1.62
SSBP4-203ENST00000593641 ANKEF1Q9NU02 776 aa25.19■■□□□ 1.62
SSBP4-203ENST00000593641 MARCH5Q9NX47 278 aa25.19■■□□□ 1.62
SSBP4-203ENST00000593641 DPP7Q9UHL4 492 aa25.19■■□□□ 1.62
SSBP4-203ENST00000593641 INPPL1O15357 1258 aa25.18■■□□□ 1.62
SSBP4-203ENST00000593641 NEMFO60524 1076 aa25.18■■□□□ 1.62
SSBP4-203ENST00000593641 LYPLA2O95372 231 aa25.18■■□□□ 1.62
SSBP4-203ENST00000593641 POU5F1BQ06416 359 aa25.18■■□□□ 1.62
SSBP4-203ENST00000593641 CAPSQ13938 189 aa25.18■■□□□ 1.62
SSBP4-203ENST00000593641 RPS6KC1Q96S38 1066 aa25.18■■□□□ 1.62
SSBP4-203ENST00000593641 HSD17B14Q9BPX1 270 aa25.18■■□□□ 1.62
SSBP4-203ENST00000593641 MAN1C1Q9NR34 630 aa25.18■■□□□ 1.62
SSBP4-203ENST00000593641 HES2Q9Y543 173 aa25.18■■□□□ 1.62
SSBP4-203ENST00000593641 MTCL1Q9Y4B5 1905 aaKnown RBP25.18■■□□□ 1.62
SSBP4-203ENST00000593641 FDPSP14324 419 aaKnown RBP25.17■■□□□ 1.62
SSBP4-203ENST00000593641 GLUD2P49448 558 aa25.17■■□□□ 1.62
SSBP4-203ENST00000593641 SCNN1GP51170 649 aa25.17■■□□□ 1.62
SSBP4-203ENST00000593641 MBTD1Q05BQ5 628 aa25.17■■□□□ 1.62
SSBP4-203ENST00000593641 TRIM29Q14134 588 aa25.17■■□□□ 1.62
SSBP4-203ENST00000593641 NECAB1Q8N987 351 aa25.17■■□□□ 1.62
SSBP4-203ENST00000593641 FEZF2Q8TBJ5 459 aa25.17■■□□□ 1.62
SSBP4-203ENST00000593641 ASAP3Q8TDY4 903 aa25.17■■□□□ 1.62
SSBP4-203ENST00000593641 GTF3C6Q969F1 213 aa25.17■■□□□ 1.62
SSBP4-203ENST00000593641 ZFP42Q96MM3 310 aa25.17■■□□□ 1.62
SSBP4-203ENST00000593641 RNF39Q9H2S5 420 aa25.17■■□□□ 1.62
SSBP4-203ENST00000593641 GIT1Q9Y2X7 761 aa25.17■■□□□ 1.62
SSBP4-203ENST00000593641 ZFHX2Q9C0A1 2572 aaPredicted RBP25.17■■□□□ 1.62
SSBP4-203ENST00000593641 PTPRZ1P23471 2315 aaPredicted RBP25.17■■□□□ 1.62
SSBP4-203ENST00000593641 H0Y858 1186 aa25.16■■□□□ 1.62
SSBP4-203ENST00000593641 GALR2O43603 387 aaPredicted RBP25.16■■□□□ 1.62
SSBP4-203ENST00000593641 GLUD1P00367 558 aa25.16■■□□□ 1.62
SSBP4-203ENST00000593641 ARL2P36404 184 aa25.16■■□□□ 1.62
SSBP4-203ENST00000593641 TXKP42681 527 aa25.16■■□□□ 1.62
SSBP4-203ENST00000593641 RARRES1P49788 294 aa25.16■■□□□ 1.62
SSBP4-203ENST00000593641 DSC1Q08554 894 aa25.16■■□□□ 1.62
SSBP4-203ENST00000593641 NFKBIZQ9BYH8 718 aa25.16■■□□□ 1.62
SSBP4-203ENST00000593641 MYO15AQ9UKN7 3530 aa25.15■■□□□ 1.62
SSBP4-203ENST00000593641 TEX28O15482 410 aa25.15■■□□□ 1.62
SSBP4-203ENST00000593641 ST18O60284 1047 aa25.15■■□□□ 1.62
SSBP4-203ENST00000593641 GFRA3O60609 400 aa25.15■■□□□ 1.62
SSBP4-203ENST00000593641 NEFLP07196 543 aa25.15■■□□□ 1.62
SSBP4-203ENST00000593641 ARF4P18085 180 aaPredicted RBP25.15■■□□□ 1.62
SSBP4-203ENST00000593641 ME3Q16798 604 aa25.15■■□□□ 1.62
SSBP4-203ENST00000593641 DIS3L2Q8IYB7 885 aaKnown RBP25.15■■□□□ 1.62
SSBP4-203ENST00000593641 TMEM105Q8N8V8 129 aa25.15■■□□□ 1.62
SSBP4-203ENST00000593641 CMASQ8NFW8 434 aaPredicted RBP25.15■■□□□ 1.62
SSBP4-203ENST00000593641 COLEC11Q9BWP8 271 aa25.15■■□□□ 1.62
SSBP4-203ENST00000593641 NXF3Q9H4D5 531 aaKnown RBP25.15■■□□□ 1.62
SSBP4-203ENST00000593641 BTBD18B2RXH4 712 aa25.14■■□□□ 1.62
SSBP4-203ENST00000593641 GLRA2P23416 452 aa25.14■■□□□ 1.62
SSBP4-203ENST00000593641 AMHR2Q16671 573 aa25.14■■□□□ 1.62
SSBP4-203ENST00000593641 ASTLQ6HA08 431 aaPredicted RBP25.14■■□□□ 1.62
SSBP4-203ENST00000593641 SLC27A1Q6PCB7 646 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms