RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 MBNL2Q5VZF2 373 aaKnown RBP6.5□□□□□ -1.37
SMAD4-216ENST00000593223 BTNL9Q6UXG8 535 aa6.5□□□□□ -1.37
SMAD4-216ENST00000593223 CMTM4Q8IZR5 234 aa6.5□□□□□ -1.37
SMAD4-216ENST00000593223 FUKQ8N0W3 1084 aa6.5□□□□□ -1.37
SMAD4-216ENST00000593223 MSL3Q8N5Y2 521 aaKnown RBP6.5□□□□□ -1.37
SMAD4-216ENST00000593223 GLB1L3Q8NCI6 653 aaPredicted RBP6.5□□□□□ -1.37
SMAD4-216ENST00000593223 OR5M3Q8NGP4 307 aa6.5□□□□□ -1.37
SMAD4-216ENST00000593223 FUBP3Q96I24 572 aaKnown RBP eCLIP6.5□□□□□ -1.37
SMAD4-216ENST00000593223 SAMD11Q96NU1 681 aa6.5□□□□□ -1.37
SMAD4-216ENST00000593223 SLC2A13Q96QE2 648 aa6.5□□□□□ -1.37
SMAD4-216ENST00000593223 TCF25Q9BQ70 676 aa6.5□□□□□ -1.37
SMAD4-216ENST00000593223 SSBP3Q9BWW4 388 aaPredicted RBP6.5□□□□□ -1.37
SMAD4-216ENST00000593223 ASPSCR1Q9BZE9 553 aa6.5□□□□□ -1.37
SMAD4-216ENST00000593223 EPC1Q9H2F5 836 aa6.5□□□□□ -1.37
SMAD4-216ENST00000593223 DEF6Q9H4E7 631 aa6.5□□□□□ -1.37
SMAD4-216ENST00000593223 AGO3Q9H9G7 860 aaKnown RBP6.5□□□□□ -1.37
SMAD4-216ENST00000593223 TLR9Q9NR96 1032 aa6.5□□□□□ -1.37
SMAD4-216ENST00000593223 PLA2G3Q9NZ20 509 aa6.5□□□□□ -1.37
SMAD4-216ENST00000593223 CNOT11Q9UKZ1 510 aaKnown RBP6.5□□□□□ -1.37
SMAD4-216ENST00000593223 KLHL33A6NCF5 533 aa6.49□□□□□ -1.37
SMAD4-216ENST00000593223 TRIM75PA6NK02 468 aa6.49□□□□□ -1.37
SMAD4-216ENST00000593223 MTSS1O43312 755 aa6.49□□□□□ -1.37
SMAD4-216ENST00000593223 ZNF623O75123 536 aa6.49□□□□□ -1.37
SMAD4-216ENST00000593223 RAD17O75943 681 aa6.49□□□□□ -1.37
SMAD4-216ENST00000593223 MSX2P35548 267 aaPredicted RBP6.49□□□□□ -1.37
SMAD4-216ENST00000593223 ICAM4Q14773 271 aa6.49□□□□□ -1.37
SMAD4-216ENST00000593223 ADRM1Q16186 407 aa6.49□□□□□ -1.37
SMAD4-216ENST00000593223 ANO4Q32M45 955 aa6.49□□□□□ -1.37
SMAD4-216ENST00000593223 INAVAQ3KP66 663 aa6.49□□□□□ -1.37
SMAD4-216ENST00000593223 HS1BP3Q53T59 392 aa6.49□□□□□ -1.37
SMAD4-216ENST00000593223 ABHD15Q6UXT9 468 aa6.49□□□□□ -1.37
SMAD4-216ENST00000593223 PPM1NQ8N819 430 aa6.49□□□□□ -1.37
SMAD4-216ENST00000593223 SNX33Q8WV41 574 aa6.49□□□□□ -1.37
SMAD4-216ENST00000593223 POLR3GLQ9BT43 218 aa6.49□□□□□ -1.37
SMAD4-216ENST00000593223 ADI1Q9BV57 179 aa6.49□□□□□ -1.37
SMAD4-216ENST00000593223 SMPD4Q9NXE4 827 aa6.49□□□□□ -1.37
SMAD4-216ENST00000593223 DDX56Q9NY93 547 aaKnown RBP6.49□□□□□ -1.37
SMAD4-216ENST00000593223 ST6GALNAC2Q9UJ37 374 aa6.49□□□□□ -1.37
SMAD4-216ENST00000593223 PCDHGA2Q9Y5H1 932 aa6.49□□□□□ -1.37
SMAD4-216ENST00000593223 PATE3B3GLJ2 98 aa6.48□□□□□ -1.37
SMAD4-216ENST00000593223 AKR1B10O60218 316 aa6.48□□□□□ -1.37
SMAD4-216ENST00000593223 TMEM127O75204 238 aa6.48□□□□□ -1.37
SMAD4-216ENST00000593223 RBP3P10745 1247 aa6.48□□□□□ -1.37
SMAD4-216ENST00000593223 AGXTP21549 392 aa6.48□□□□□ -1.37
SMAD4-216ENST00000593223 CTSSP25774 331 aa6.48□□□□□ -1.37
SMAD4-216ENST00000593223 WNT3AP56704 352 aa6.48□□□□□ -1.37
SMAD4-216ENST00000593223 ADAM8P78325 824 aa6.48□□□□□ -1.37
SMAD4-216ENST00000593223 EXOSC10Q01780 885 aaKnown RBP6.48□□□□□ -1.37
SMAD4-216ENST00000593223 HHEXQ03014 270 aa6.48□□□□□ -1.37
SMAD4-216ENST00000593223 FAM111BQ6SJ93 734 aa6.48□□□□□ -1.37
SMAD4-216ENST00000593223 POLNQ7Z5Q5 900 aa6.48□□□□□ -1.37
SMAD4-216ENST00000593223 ADGRE4PQ86SQ3 457 aa6.48□□□□□ -1.37
SMAD4-216ENST00000593223 D2HGDHQ8N465 521 aa6.48□□□□□ -1.37
SMAD4-216ENST00000593223 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.48□□□□□ -1.37
SMAD4-216ENST00000593223 RIN2Q8WYP3 895 aaPredicted RBP6.48□□□□□ -1.37
SMAD4-216ENST00000593223 GREM2Q9H772 168 aa6.48□□□□□ -1.37
SMAD4-216ENST00000593223 TYW1Q9NV66 732 aaKnown RBP6.48□□□□□ -1.37
SMAD4-216ENST00000593223 DNM3Q9UQ16 869 aa6.48□□□□□ -1.37
SMAD4-216ENST00000593223 TCAF1Q9Y4C2 921 aa6.48□□□□□ -1.37
SMAD4-216ENST00000593223 SPEF1Q9Y4P9 236 aa6.48□□□□□ -1.37
SMAD4-216ENST00000593223 RPTORQ8N122 1335 aa6.48□□□□□ -1.37
SMAD4-216ENST00000593223 PHF2O75151 1096 aa6.47□□□□□ -1.37
SMAD4-216ENST00000593223 GYPEP15421 78 aa6.47□□□□□ -1.37
SMAD4-216ENST00000593223 COMTP21964 271 aa6.47□□□□□ -1.37
SMAD4-216ENST00000593223 ADSLP30566 484 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-216ENST00000593223 CASRP41180 1078 aa6.47□□□□□ -1.37
SMAD4-216ENST00000593223 FOXL1Q12952 345 aa6.47□□□□□ -1.37
SMAD4-216ENST00000593223 MALLQ13021 153 aa6.47□□□□□ -1.37
SMAD4-216ENST00000593223 DUSP8Q13202 625 aa6.47□□□□□ -1.37
SMAD4-216ENST00000593223 NOMO1Q15155 1222 aa6.47□□□□□ -1.37
SMAD4-216ENST00000593223 PCBP2Q15366 365 aaKnown RBP eCLIP6.47□□□□□ -1.37
SMAD4-216ENST00000593223 C19orf54Q5BKX5 351 aa6.47□□□□□ -1.37
SMAD4-216ENST00000593223 LCE5AQ5TCM9 118 aa6.47□□□□□ -1.37
SMAD4-216ENST00000593223 ZNF585AQ6P3V2 769 aa6.47□□□□□ -1.37
SMAD4-216ENST00000593223 ANKRD13AQ8IZ07 590 aa6.47□□□□□ -1.37
SMAD4-216ENST00000593223 GPR156Q8NFN8 814 aa6.47□□□□□ -1.37
SMAD4-216ENST00000593223 Q8TCH9 128 aa6.47□□□□□ -1.37
SMAD4-216ENST00000593223 SSH1Q8WYL5 1049 aa6.47□□□□□ -1.37
SMAD4-216ENST00000593223 C8orf49Q96NF6 230 aa6.47□□□□□ -1.37
SMAD4-216ENST00000593223 DMRT3Q9NQL9 472 aa6.47□□□□□ -1.37
SMAD4-216ENST00000593223 SLC30A1Q9Y6M5 507 aa6.47□□□□□ -1.37
SMAD4-216ENST00000593223 TNKSO95271 1327 aa6.47□□□□□ -1.37
SMAD4-216ENST00000593223 ABCC10Q5T3U5 1492 aa6.47□□□□□ -1.37
SMAD4-216ENST00000593223 PDGFRBP09619 1106 aa6.46□□□□□ -1.38
SMAD4-216ENST00000593223 GSPT1P15170 499 aaKnown RBP6.46□□□□□ -1.38
SMAD4-216ENST00000593223 PER3P56645 1201 aa6.46□□□□□ -1.38
SMAD4-216ENST00000593223 EFCAB2Q5VUJ9 269 aa6.46□□□□□ -1.38
SMAD4-216ENST00000593223 ZBTB46Q86UZ6 589 aa6.46□□□□□ -1.38
SMAD4-216ENST00000593223 SGMS1Q86VZ5 419 aa6.46□□□□□ -1.38
SMAD4-216ENST00000593223 DNERQ8NFT8 737 aa6.46□□□□□ -1.38
SMAD4-216ENST00000593223 ZNF480Q8WV37 535 aa6.46□□□□□ -1.38
SMAD4-216ENST00000593223 JADE3Q92613 823 aa6.46□□□□□ -1.38
SMAD4-216ENST00000593223 UHRF1Q96T88 793 aaPredicted RBP6.46□□□□□ -1.38
SMAD4-216ENST00000593223 CDC5LQ99459 802 aaKnown RBP6.46□□□□□ -1.38
SMAD4-216ENST00000593223 ZNF277Q9NRM2 450 aaPredicted RBP6.46□□□□□ -1.38
SMAD4-216ENST00000593223 RBM12Q9NTZ6 932 aaKnown RBP6.46□□□□□ -1.38
SMAD4-216ENST00000593223 SNUPNO95149 360 aaKnown RBP6.45□□□□□ -1.38
SMAD4-216ENST00000593223 ECHS1P30084 290 aa6.45□□□□□ -1.38
SMAD4-216ENST00000593223 FKBP15Q5T1M5 1219 aa6.45□□□□□ -1.38
SMAD4-216ENST00000593223 TTC9BQ8N6N2 239 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms