RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 MRPL4Q9BYD3 311 aaKnown RBP10.93□□□□□ -0.66
TPM4-216ENST00000592822 PBX4Q9BYU1 374 aa10.93□□□□□ -0.66
TPM4-216ENST00000592822 PDZD7Q9H5P4 517 aa10.93□□□□□ -0.66
TPM4-216ENST00000592822 ELAC1Q9H777 363 aaKnown RBP10.93□□□□□ -0.66
TPM4-216ENST00000592822 MRPL44Q9H9J2 332 aaKnown RBP10.93□□□□□ -0.66
TPM4-216ENST00000592822 PTPRHQ9HD43 1115 aa10.93□□□□□ -0.66
TPM4-216ENST00000592822 LMBRD1Q9NUN5 540 aa10.93□□□□□ -0.66
TPM4-216ENST00000592822 RNF19AQ9NV58 838 aa10.93□□□□□ -0.66
TPM4-216ENST00000592822 TMEM161AQ9NX61 479 aa10.93□□□□□ -0.66
TPM4-216ENST00000592822 TBX20Q9UMR3 447 aa10.93□□□□□ -0.66
TPM4-216ENST00000592822 YBX2Q9Y2T7 364 aaKnown RBP10.93□□□□□ -0.66
TPM4-216ENST00000592822 PCDHB7Q9Y5E2 793 aa10.93□□□□□ -0.66
TPM4-216ENST00000592822 PCDHB2Q9Y5E7 798 aa10.93□□□□□ -0.66
TPM4-216ENST00000592822 PCDHA11Q9Y5I1 949 aa10.93□□□□□ -0.66
TPM4-216ENST00000592822 FNDC1Q4ZHG4 1894 aaPredicted RBP10.93□□□□□ -0.66
TPM4-216ENST00000592822 LCHNA4D1U4 455 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 ABLIM1O14639 778 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 N4BP3O15049 544 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 TLL1O43897 1013 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 DGKIO75912 1065 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 NPTXRO95502 500 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 EOMESO95936 686 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 MYL1P05976 194 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 STAG3L1P0CL83 205 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 MYBP10242 640 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 FGFR1P11362 822 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 RAB27AP51159 221 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 KCNA1Q09470 495 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 TMEM132AQ24JP5 1023 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 ATF7IP2Q5U623 682 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 KANK3Q6NY19 840 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 SLC27A1Q6PCB7 646 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 RNF169Q8NCN4 708 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 SMG8Q8ND04 991 aaKnown RBP10.92□□□□□ -0.66
TPM4-216ENST00000592822 SLC17A8Q8NDX2 589 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 LPPQ93052 612 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 ZNF689Q96CS4 500 aaPredicted RBP10.92□□□□□ -0.66
TPM4-216ENST00000592822 RAD9AQ99638 391 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 IKZF4Q9H2S9 585 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 RC3H2Q9HBD1 1191 aaKnown RBP10.92□□□□□ -0.66
TPM4-216ENST00000592822 LRFN2Q9ULH4 789 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 TNFSF13BQ9Y275 285 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 IPPQ9Y573 584 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 CHD7Q9P2D1 2997 aa10.92□□□□□ -0.66
TPM4-216ENST00000592822 MEIS3P2A8K0S8 358 aa10.91□□□□□ -0.66
TPM4-216ENST00000592822 ARHGEF15O94989 841 aa10.91□□□□□ -0.66
TPM4-216ENST00000592822 GCNT3O95395 438 aa10.91□□□□□ -0.66
TPM4-216ENST00000592822 PIGRP01833 764 aa10.91□□□□□ -0.66
TPM4-216ENST00000592822 RPN1P04843 607 aaKnown RBP10.91□□□□□ -0.66
TPM4-216ENST00000592822 SKIP12755 728 aa10.91□□□□□ -0.66
TPM4-216ENST00000592822 PROZP22891 400 aa10.91□□□□□ -0.66
TPM4-216ENST00000592822 DNAJB2P25686 324 aa10.91□□□□□ -0.66
TPM4-216ENST00000592822 ABCD1P33897 745 aa10.91□□□□□ -0.66
TPM4-216ENST00000592822 PNOCQ13519 176 aa10.91□□□□□ -0.66
TPM4-216ENST00000592822 POSTNQ15063 836 aa10.91□□□□□ -0.66
TPM4-216ENST00000592822 RAB30Q15771 203 aa10.91□□□□□ -0.66
TPM4-216ENST00000592822 KMT5BQ4FZB7 885 aa10.91□□□□□ -0.66
TPM4-216ENST00000592822 CLLU1OSQ5K130 101 aa10.91□□□□□ -0.66
TPM4-216ENST00000592822 FAM26FQ5R3K3 315 aa10.91□□□□□ -0.66
TPM4-216ENST00000592822 ZPBP2Q6X784 338 aa10.91□□□□□ -0.66
TPM4-216ENST00000592822 AGMOQ6ZNB7 445 aa10.91□□□□□ -0.66
TPM4-216ENST00000592822 EPM2AIP1Q7L775 607 aaPredicted RBP10.91□□□□□ -0.66
TPM4-216ENST00000592822 MAP4K3Q8IVH8 894 aa10.91□□□□□ -0.66
TPM4-216ENST00000592822 SP7Q8TDD2 431 aaPredicted RBP10.91□□□□□ -0.66
TPM4-216ENST00000592822 HVCN1Q96D96 273 aa10.91□□□□□ -0.66
TPM4-216ENST00000592822 LRCH3Q96II8 777 aa10.91□□□□□ -0.66
TPM4-216ENST00000592822 ZBTB45Q96K62 511 aaPredicted RBP10.91□□□□□ -0.66
TPM4-216ENST00000592822 CDT1Q9H211 546 aa10.91□□□□□ -0.66
TPM4-216ENST00000592822 RNF39Q9H2S5 420 aa10.91□□□□□ -0.66
TPM4-216ENST00000592822 NXF3Q9H4D5 531 aaKnown RBP10.91□□□□□ -0.66
TPM4-216ENST00000592822 RNF216Q9NWF9 866 aaPredicted RBP10.91□□□□□ -0.66
TPM4-216ENST00000592822 HES2Q9Y543 173 aa10.91□□□□□ -0.66
TPM4-216ENST00000592822 INSL6Q9Y581 213 aa10.91□□□□□ -0.66
TPM4-216ENST00000592822 TISP43B9A030 160 aa10.9□□□□□ -0.66
TPM4-216ENST00000592822 ANKRD63C9JTQ0 380 aa10.9□□□□□ -0.66
TPM4-216ENST00000592822 KINO60870 393 aaKnown RBP10.9□□□□□ -0.66
TPM4-216ENST00000592822 TOM1L1O75674 476 aa10.9□□□□□ -0.66
TPM4-216ENST00000592822 PRPF6O94906 941 aaKnown RBP10.9□□□□□ -0.66
TPM4-216ENST00000592822 CA3P07451 260 aa10.9□□□□□ -0.66
TPM4-216ENST00000592822 HOXD13P35453 343 aa10.9□□□□□ -0.66
TPM4-216ENST00000592822 STK4Q13043 487 aa10.9□□□□□ -0.66
TPM4-216ENST00000592822 ALCAMQ13740 583 aa10.9□□□□□ -0.66
TPM4-216ENST00000592822 DCAF4L1Q3SXM0 396 aa10.9□□□□□ -0.66
TPM4-216ENST00000592822 ZNF568Q3ZCX4 644 aa10.9□□□□□ -0.66
TPM4-216ENST00000592822 L1TD1Q5T7N2 865 aaKnown RBP10.9□□□□□ -0.66
TPM4-216ENST00000592822 SLC39A4Q6P5W5 647 aa10.9□□□□□ -0.66
TPM4-216ENST00000592822 MPZL3Q6UWV2 235 aa10.9□□□□□ -0.66
TPM4-216ENST00000592822 ZBTB33Q86T24 672 aa10.9□□□□□ -0.66
TPM4-216ENST00000592822 ELOA2Q8IYF1 753 aaPredicted RBP10.9□□□□□ -0.66
TPM4-216ENST00000592822 PGBD4Q96DM1 585 aa10.9□□□□□ -0.66
TPM4-216ENST00000592822 CASD1Q96PB1 797 aa10.9□□□□□ -0.66
TPM4-216ENST00000592822 ACCSQ96QU6 501 aa10.9□□□□□ -0.66
TPM4-216ENST00000592822 YME1L1Q96TA2 773 aa10.9□□□□□ -0.66
TPM4-216ENST00000592822 TRIM6Q9C030 488 aaPredicted RBP10.9□□□□□ -0.66
TPM4-216ENST00000592822 HAPLN2Q9GZV7 340 aa10.9□□□□□ -0.66
TPM4-216ENST00000592822 NKX2-4Q9H2Z4 354 aa10.9□□□□□ -0.66
TPM4-216ENST00000592822 EXOC1Q9NV70 894 aa10.9□□□□□ -0.66
TPM4-216ENST00000592822 MSRAQ9UJ68 235 aa10.9□□□□□ -0.66
TPM4-216ENST00000592822 PCDHB13Q9Y5F0 798 aa10.9□□□□□ -0.66
TPM4-216ENST00000592822 KIAA1671Q9BY89 1806 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms