RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 GTF2F1P35269 517 aaKnown RBP eCLIP30.06■■■□□ 2.4
SMAD4-213ENST00000591914 PRPF4BQ13523 1007 aaKnown RBP30.06■■■□□ 2.4
SMAD4-213ENST00000591914 FAM173BQ6P4H8 233 aa30.06■■■□□ 2.4
SMAD4-213ENST00000591914 ZNF280BQ86YH2 543 aa30.06■■■□□ 2.4
SMAD4-213ENST00000591914 DRC1Q96MC2 740 aa30.06■■■□□ 2.4
SMAD4-213ENST00000591914 NT5C1B-RDH14C9J2C7 533 aa30.05■■■□□ 2.4
SMAD4-213ENST00000591914 B4GALT3O60512 393 aa30.05■■■□□ 2.4
SMAD4-213ENST00000591914 NPTXRO95502 500 aa30.05■■■□□ 2.4
SMAD4-213ENST00000591914 LTBRP36941 435 aa30.05■■■□□ 2.4
SMAD4-213ENST00000591914 UBA7P41226 1012 aa30.05■■■□□ 2.4
SMAD4-213ENST00000591914 SLC12A3P55017 1021 aa30.05■■■□□ 2.4
SMAD4-213ENST00000591914 HACE1Q8IYU2 909 aa30.05■■■□□ 2.4
SMAD4-213ENST00000591914 MICAL1Q8TDZ2 1067 aa30.05■■■□□ 2.4
SMAD4-213ENST00000591914 ZSCAN16Q9H4T2 348 aaPredicted RBP30.05■■■□□ 2.4
SMAD4-213ENST00000591914 PDZD7Q9H5P4 517 aa30.05■■■□□ 2.4
SMAD4-213ENST00000591914 DNAJB4Q9UDY4 337 aa30.05■■■□□ 2.4
SMAD4-213ENST00000591914 TCF20Q9UGU0 1960 aaKnown RBP30.04■■■□□ 2.4
SMAD4-213ENST00000591914 ARL5CA6NH57 179 aa30.04■■■□□ 2.4
SMAD4-213ENST00000591914 EDN1P05305 212 aa30.04■■■□□ 2.4
SMAD4-213ENST00000591914 GALTP07902 379 aa30.04■■■□□ 2.4
SMAD4-213ENST00000591914 PLA2G4BP0C869 781 aa30.04■■■□□ 2.4
SMAD4-213ENST00000591914 NPTX2P47972 431 aa30.04■■■□□ 2.4
SMAD4-213ENST00000591914 PEX3P56589 373 aa30.04■■■□□ 2.4
SMAD4-213ENST00000591914 TMEM173Q86WV6 379 aaPredicted RBP30.04■■■□□ 2.4
SMAD4-213ENST00000591914 GADD45GIP1Q8TAE8 222 aaPredicted RBP30.04■■■□□ 2.4
SMAD4-213ENST00000591914 CALML4Q96GE6 196 aa30.04■■■□□ 2.4
SMAD4-213ENST00000591914 GBP3Q9H0R5 595 aa30.04■■■□□ 2.4
SMAD4-213ENST00000591914 IGFLR1Q9H665 355 aa30.04■■■□□ 2.4
SMAD4-213ENST00000591914 C17orf75Q9HAS0 396 aa30.04■■■□□ 2.4
SMAD4-213ENST00000591914 KCND2Q9NZV8 630 aa30.04■■■□□ 2.4
SMAD4-213ENST00000591914 GIT1Q9Y2X7 761 aa30.04■■■□□ 2.4
SMAD4-213ENST00000591914 H3BQ06 376 aaPredicted RBP30.03■■■□□ 2.4
SMAD4-213ENST00000591914 N4BP3O15049 544 aa30.03■■■□□ 2.4
SMAD4-213ENST00000591914 DDHD2O94830 711 aa30.03■■■□□ 2.4
SMAD4-213ENST00000591914 SSBP05455 408 aaKnown RBP eCLIP30.03■■■□□ 2.4
SMAD4-213ENST00000591914 MLH1P40692 756 aa30.03■■■□□ 2.4
SMAD4-213ENST00000591914 NRIP1P48552 1158 aa30.03■■■□□ 2.4
SMAD4-213ENST00000591914 DMP1Q13316 513 aaPredicted RBP30.03■■■□□ 2.4
SMAD4-213ENST00000591914 ADAM15Q13444 863 aa30.03■■■□□ 2.4
SMAD4-213ENST00000591914 EP400NLQ6ZTU2 488 aa30.03■■■□□ 2.4
SMAD4-213ENST00000591914 EFHBQ8N7U6 833 aa30.03■■■□□ 2.4
SMAD4-213ENST00000591914 TMEM169Q96HH4 297 aa30.03■■■□□ 2.4
SMAD4-213ENST00000591914 UHRF1Q96T88 793 aaPredicted RBP30.03■■■□□ 2.4
SMAD4-213ENST00000591914 GAD1Q99259 594 aa30.03■■■□□ 2.4
SMAD4-213ENST00000591914 TCF25Q9BQ70 676 aa30.03■■■□□ 2.4
SMAD4-213ENST00000591914 APOL6Q9BWW8 343 aa30.03■■■□□ 2.4
SMAD4-213ENST00000591914 NGRNQ9NPE2 291 aaKnown RBP30.03■■■□□ 2.4
SMAD4-213ENST00000591914 ZMYM2Q9UBW7 1377 aa30.03■■■□□ 2.4
SMAD4-213ENST00000591914 LINC01565O15544 149 aa30.02■■■□□ 2.4
SMAD4-213ENST00000591914 POMCP01189 267 aa30.02■■■□□ 2.4
SMAD4-213ENST00000591914 LIG1P18858 919 aa30.02■■■□□ 2.4
SMAD4-213ENST00000591914 SLC11A1P49279 550 aa30.02■■■□□ 2.4
SMAD4-213ENST00000591914 RBM23Q86U06 439 aaKnown RBP30.02■■■□□ 2.4
SMAD4-213ENST00000591914 LRRC15Q8TF66 581 aa30.02■■■□□ 2.4
SMAD4-213ENST00000591914 IGSF21Q96ID5 467 aa30.02■■■□□ 2.4
SMAD4-213ENST00000591914 ZFP42Q96MM3 310 aa30.02■■■□□ 2.4
SMAD4-213ENST00000591914 TLE6Q9H808 572 aa30.02■■■□□ 2.4
SMAD4-213ENST00000591914 ENTPD7Q9NQZ7 604 aa30.02■■■□□ 2.4
SMAD4-213ENST00000591914 ARHGAP28Q9P2N2 729 aa30.02■■■□□ 2.4
SMAD4-213ENST00000591914 FBXO2Q9UK22 296 aaPredicted RBP30.02■■■□□ 2.4
SMAD4-213ENST00000591914 USP20Q9Y2K6 914 aa30.02■■■□□ 2.4
SMAD4-213ENST00000591914 CCDC169A6NNP5 214 aa30.01■■■□□ 2.39
SMAD4-213ENST00000591914 K7ERI5 159 aa30.01■■■□□ 2.39
SMAD4-213ENST00000591914 DLX2Q07687 328 aaPredicted RBP30.01■■■□□ 2.39
SMAD4-213ENST00000591914 PLPP4Q5VZY2 271 aa30.01■■■□□ 2.39
SMAD4-213ENST00000591914 BCL7CQ8WUZ0 217 aaPredicted RBP30.01■■■□□ 2.39
SMAD4-213ENST00000591914 TMEM175Q9BSA9 504 aa30.01■■■□□ 2.39
SMAD4-213ENST00000591914 DAXXQ9UER7 740 aaPredicted RBP30.01■■■□□ 2.39
SMAD4-213ENST00000591914 SRPRBQ9Y5M8 271 aaKnown RBP30.01■■■□□ 2.39
SMAD4-213ENST00000591914 MORC2Q9Y6X9 1032 aaPredicted RBP30.01■■■□□ 2.39
SMAD4-213ENST00000591914 PHLPP2Q6ZVD8 1323 aa30■■■□□ 2.39
SMAD4-213ENST00000591914 TBX10O75333 385 aa30■■■□□ 2.39
SMAD4-213ENST00000591914 PLCG1P19174 1290 aa30■■■□□ 2.39
SMAD4-213ENST00000591914 AKAP5P24588 427 aa30■■■□□ 2.39
SMAD4-213ENST00000591914 MARCKSP29966 332 aaPredicted RBP30■■■□□ 2.39
SMAD4-213ENST00000591914 RAD51AP2Q09MP3 1159 aa30■■■□□ 2.39
SMAD4-213ENST00000591914 TMEM132AQ24JP5 1023 aa30■■■□□ 2.39
SMAD4-213ENST00000591914 PUS10Q3MIT2 529 aaKnown RBP30■■■□□ 2.39
SMAD4-213ENST00000591914 ARSHQ5FYA8 562 aa30■■■□□ 2.39
SMAD4-213ENST00000591914 NT5DC1Q5TFE4 455 aa30■■■□□ 2.39
SMAD4-213ENST00000591914 FAM193BQ96PV7 902 aaPredicted RBP30■■■□□ 2.39
SMAD4-213ENST00000591914 USP28Q96RU2 1077 aa30■■■□□ 2.39
SMAD4-213ENST00000591914 CDCA3Q99618 268 aaPredicted RBP30■■■□□ 2.39
SMAD4-213ENST00000591914 NTPCRQ9BSD7 190 aaKnown RBP30■■■□□ 2.39
SMAD4-213ENST00000591914 CCSER1Q9C0I3 900 aa30■■■□□ 2.39
SMAD4-213ENST00000591914 TMEM134Q9H6X4 195 aa30■■■□□ 2.39
SMAD4-213ENST00000591914 BLOC1S4Q9NUP1 217 aa30■■■□□ 2.39
SMAD4-213ENST00000591914 MIOSQ9NXC5 875 aa30■■■□□ 2.39
SMAD4-213ENST00000591914 RBM19Q9Y4C8 960 aaKnown RBP30■■■□□ 2.39
SMAD4-213ENST00000591914 SCNN1GP51170 649 aa29.99■■■□□ 2.39
SMAD4-213ENST00000591914 DSC1Q08554 894 aa29.99■■■□□ 2.39
SMAD4-213ENST00000591914 KARSQ15046 597 aaKnown RBP29.99■■■□□ 2.39
SMAD4-213ENST00000591914 DUSP6Q16828 381 aa29.99■■■□□ 2.39
SMAD4-213ENST00000591914 EEF1DP3Q658K8 133 aa29.99■■■□□ 2.39
SMAD4-213ENST00000591914 PTCRAQ6ISU1 281 aaPredicted RBP29.99■■■□□ 2.39
SMAD4-213ENST00000591914 TMC7Q7Z402 723 aa29.99■■■□□ 2.39
SMAD4-213ENST00000591914 DDX53Q86TM3 631 aaKnown RBP29.99■■■□□ 2.39
SMAD4-213ENST00000591914 GSTCDQ8NEC7 633 aa29.99■■■□□ 2.39
SMAD4-213ENST00000591914 NECAB3Q96P71 396 aaPredicted RBP29.99■■■□□ 2.39
SMAD4-213ENST00000591914 ADPGKQ9BRR6 497 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms