RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 MSX2P35548 267 aaPredicted RBP4.6□□□□□ -1.67
VMP1-212ENST00000591782 CASRP41180 1078 aa4.6□□□□□ -1.67
VMP1-212ENST00000591782 MCAMP43121 646 aa4.6□□□□□ -1.67
VMP1-212ENST00000591782 NEK2P51955 445 aa4.6□□□□□ -1.67
VMP1-212ENST00000591782 NPEPPSP55786 919 aa4.6□□□□□ -1.67
VMP1-212ENST00000591782 KRT85P78386 507 aa4.6□□□□□ -1.67
VMP1-212ENST00000591782 DUSP2Q05923 314 aa4.6□□□□□ -1.67
VMP1-212ENST00000591782 PPP3CAQ08209 521 aa4.6□□□□□ -1.67
VMP1-212ENST00000591782 FOXL1Q12952 345 aa4.6□□□□□ -1.67
VMP1-212ENST00000591782 C19orf54Q5BKX5 351 aa4.6□□□□□ -1.67
VMP1-212ENST00000591782 ZBTB46Q86UZ6 589 aa4.6□□□□□ -1.67
VMP1-212ENST00000591782 LILRA3Q8N6C8 439 aaPredicted RBP4.6□□□□□ -1.67
VMP1-212ENST00000591782 DNERQ8NFT8 737 aa4.6□□□□□ -1.67
VMP1-212ENST00000591782 CEP89Q96ST8 783 aa4.6□□□□□ -1.67
VMP1-212ENST00000591782 TCF25Q9BQ70 676 aa4.6□□□□□ -1.67
VMP1-212ENST00000591782 NELFAQ9H3P2 528 aa4.6□□□□□ -1.67
VMP1-212ENST00000591782 CD248Q9HCU0 757 aa4.6□□□□□ -1.67
VMP1-212ENST00000591782 DNM3Q9UQ16 869 aa4.6□□□□□ -1.67
VMP1-212ENST00000591782 SLC30A1Q9Y6M5 507 aa4.6□□□□□ -1.67
VMP1-212ENST00000591782 CLSPNQ9HAW4 1339 aa4.6□□□□□ -1.67
VMP1-212ENST00000591782 PHF2O75151 1096 aa4.59□□□□□ -1.67
VMP1-212ENST00000591782 ITGA10O75578 1167 aa4.59□□□□□ -1.67
VMP1-212ENST00000591782 STC2O76061 302 aa4.59□□□□□ -1.67
VMP1-212ENST00000591782 GYPEP15421 78 aa4.59□□□□□ -1.67
VMP1-212ENST00000591782 NOMO1Q15155 1222 aa4.59□□□□□ -1.67
VMP1-212ENST00000591782 TTF1Q15361 905 aaPredicted RBP4.59□□□□□ -1.67
VMP1-212ENST00000591782 MST1LQ2TV78 715 aa4.59□□□□□ -1.67
VMP1-212ENST00000591782 PLEKHG6Q3KR16 790 aa4.59□□□□□ -1.67
VMP1-212ENST00000591782 ZNF585AQ6P3V2 769 aa4.59□□□□□ -1.67
VMP1-212ENST00000591782 FAM111BQ6SJ93 734 aa4.59□□□□□ -1.67
VMP1-212ENST00000591782 Q6ZVL8 140 aa4.59□□□□□ -1.67
VMP1-212ENST00000591782 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.59□□□□□ -1.67
VMP1-212ENST00000591782 OR5M3Q8NGP4 307 aa4.59□□□□□ -1.67
VMP1-212ENST00000591782 ZNF480Q8WV37 535 aa4.59□□□□□ -1.67
VMP1-212ENST00000591782 ARL8AQ96BM9 186 aa4.59□□□□□ -1.67
VMP1-212ENST00000591782 CHMP4CQ96CF2 233 aa4.59□□□□□ -1.67
VMP1-212ENST00000591782 WWC2-AS2Q96NR7 200 aa4.59□□□□□ -1.67
VMP1-212ENST00000591782 SAMD11Q96NU1 681 aa4.59□□□□□ -1.67
VMP1-212ENST00000591782 ADI1Q9BV57 179 aa4.59□□□□□ -1.67
VMP1-212ENST00000591782 ENKD1Q9H0I2 346 aa4.59□□□□□ -1.67
VMP1-212ENST00000591782 RBM12Q9NTZ6 932 aaKnown RBP4.59□□□□□ -1.67
VMP1-212ENST00000591782 GPRC5DQ9NZD1 345 aa4.59□□□□□ -1.67
VMP1-212ENST00000591782 CNOT11Q9UKZ1 510 aaKnown RBP4.59□□□□□ -1.67
VMP1-212ENST00000591782 PPM1GO15355 546 aaPredicted RBP4.58□□□□□ -1.68
VMP1-212ENST00000591782 ADCY6O43306 1168 aa4.58□□□□□ -1.68
VMP1-212ENST00000591782 ZNF623O75123 536 aa4.58□□□□□ -1.68
VMP1-212ENST00000591782 SNUPNO95149 360 aaKnown RBP4.58□□□□□ -1.68
VMP1-212ENST00000591782 GSPT1P15170 499 aaKnown RBP4.58□□□□□ -1.68
VMP1-212ENST00000591782 COMTP21964 271 aa4.58□□□□□ -1.68
VMP1-212ENST00000591782 RECQLP46063 649 aaPredicted RBP4.58□□□□□ -1.68
VMP1-212ENST00000591782 MCL1Q07820 350 aa4.58□□□□□ -1.68
VMP1-212ENST00000591782 FAM214AQ32MH5 1076 aa4.58□□□□□ -1.68
VMP1-212ENST00000591782 ODR4Q5SWX8 454 aa4.58□□□□□ -1.68
VMP1-212ENST00000591782 EFCAB2Q5VUJ9 269 aa4.58□□□□□ -1.68
VMP1-212ENST00000591782 POLNQ7Z5Q5 900 aa4.58□□□□□ -1.68
VMP1-212ENST00000591782 CHST13Q8NET6 341 aa4.58□□□□□ -1.68
VMP1-212ENST00000591782 OR2I1PQ8NGU4 316 aa4.58□□□□□ -1.68
VMP1-212ENST00000591782 NRG4Q8WWG1 115 aa4.58□□□□□ -1.68
VMP1-212ENST00000591782 HOOK2Q96ED9 719 aa4.58□□□□□ -1.68
VMP1-212ENST00000591782 ZNF512Q96ME7 567 aaPredicted RBP4.58□□□□□ -1.68
VMP1-212ENST00000591782 C8orf49Q96NF6 230 aa4.58□□□□□ -1.68
VMP1-212ENST00000591782 AASDHPPTQ9NRN7 309 aa4.58□□□□□ -1.68
VMP1-212ENST00000591782 SMPD4Q9NXE4 827 aa4.58□□□□□ -1.68
VMP1-212ENST00000591782 TRPS1Q9UHF7 1281 aa4.58□□□□□ -1.68
VMP1-212ENST00000591782 JAG2Q9Y219 1238 aa4.58□□□□□ -1.68
VMP1-212ENST00000591782 LUC7L2Q9Y383 392 aaKnown RBP4.58□□□□□ -1.68
VMP1-212ENST00000591782 SH3BP1Q9Y3L3 701 aa4.58□□□□□ -1.68
VMP1-212ENST00000591782 ZMYM3Q14202 1370 aa4.57□□□□□ -1.68
VMP1-212ENST00000591782 KRTAP9-7A8MTY7 169 aa4.57□□□□□ -1.68
VMP1-212ENST00000591782 ZRANB2O95218 330 aaKnown RBP eCLIP4.57□□□□□ -1.68
VMP1-212ENST00000591782 ECHS1P30084 290 aa4.57□□□□□ -1.68
VMP1-212ENST00000591782 CRHR1P34998 444 aa4.57□□□□□ -1.68
VMP1-212ENST00000591782 MGAT2Q10469 447 aa4.57□□□□□ -1.68
VMP1-212ENST00000591782 SEPT2Q15019 361 aa4.57□□□□□ -1.68
VMP1-212ENST00000591782 PRAMEF14Q5SWL7 426 aa4.57□□□□□ -1.68
VMP1-212ENST00000591782 FKBP15Q5T1M5 1219 aa4.57□□□□□ -1.68
VMP1-212ENST00000591782 FAM180AQ6UWF9 173 aa4.57□□□□□ -1.68
VMP1-212ENST00000591782 Q6ZSN1 163 aa4.57□□□□□ -1.68
VMP1-212ENST00000591782 RAVER1Q8IY67 606 aaKnown RBP4.57□□□□□ -1.68
VMP1-212ENST00000591782 THEMISQ8N1K5 641 aaPredicted RBP4.57□□□□□ -1.68
VMP1-212ENST00000591782 D2HGDHQ8N465 521 aa4.57□□□□□ -1.68
VMP1-212ENST00000591782 TTC9BQ8N6N2 239 aa4.57□□□□□ -1.68
VMP1-212ENST00000591782 REPS2Q8NFH8 660 aa4.57□□□□□ -1.68
VMP1-212ENST00000591782 MDM1Q8TC05 714 aa4.57□□□□□ -1.68
VMP1-212ENST00000591782 DPF2Q92785 391 aa4.57□□□□□ -1.68
VMP1-212ENST00000591782 HOXB13Q92826 284 aaPredicted RBP4.57□□□□□ -1.68
VMP1-212ENST00000591782 IL17RAQ96F46 866 aa4.57□□□□□ -1.68
VMP1-212ENST00000591782 DEF6Q9H4E7 631 aa4.57□□□□□ -1.68
VMP1-212ENST00000591782 SERPINB13Q9UIV8 391 aa4.57□□□□□ -1.68
VMP1-212ENST00000591782 INTUQ9ULD6 942 aa4.57□□□□□ -1.68
VMP1-212ENST00000591782 THRAP3Q9Y2W1 955 aaKnown RBP4.57□□□□□ -1.68
VMP1-212ENST00000591782 HOXA3O43365 443 aaPredicted RBP4.56□□□□□ -1.68
VMP1-212ENST00000591782 GASTP01350 101 aa4.56□□□□□ -1.68
VMP1-212ENST00000591782 ACO1P21399 889 aaKnown RBP4.56□□□□□ -1.68
VMP1-212ENST00000591782 SREBF1P36956 1147 aa4.56□□□□□ -1.68
VMP1-212ENST00000591782 MAGEA10P43363 369 aaPredicted RBP4.56□□□□□ -1.68
VMP1-212ENST00000591782 SLC6A9P48067 706 aa4.56□□□□□ -1.68
VMP1-212ENST00000591782 GZMKP49863 264 aa4.56□□□□□ -1.68
VMP1-212ENST00000591782 SLC16A1P53985 500 aa4.56□□□□□ -1.68
VMP1-212ENST00000591782 PER3P56645 1201 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms