RNA–Protein interactions for RNA: ENST00000590930.5

CHUK-204, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 1 (best)

Gene CHUK, Length 4,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-204ENST00000590930 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.44□□□□□ -1.7
CHUK-204ENST00000590930 ALOX15BO15296 676 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 CCDC159P0C7I6 412 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 TROVE2P10155 538 aaKnown RBP eCLIP4.44□□□□□ -1.7
CHUK-204ENST00000590930 SKIP12755 728 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 IDEP14735 1019 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 HNRNPFP52597 415 aaKnown RBP4.44□□□□□ -1.7
CHUK-204ENST00000590930 HDLBPQ00341 1268 aaKnown RBP4.44□□□□□ -1.7
CHUK-204ENST00000590930 CNTN2Q02246 1040 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 GRSF1Q12849 480 aaKnown RBP eCLIP4.44□□□□□ -1.7
CHUK-204ENST00000590930 UBE4AQ14139 1066 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 NDUFAF5Q5TEU4 345 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 CWC27Q6UX04 472 aaKnown RBP4.44□□□□□ -1.7
CHUK-204ENST00000590930 DDX17Q92841 729 aaKnown RBP4.44□□□□□ -1.7
CHUK-204ENST00000590930 ARHGEF1Q92888 912 aaKnown RBP4.44□□□□□ -1.7
CHUK-204ENST00000590930 RPRD1AQ96P16 312 aaPredicted RBP4.44□□□□□ -1.7
CHUK-204ENST00000590930 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.44□□□□□ -1.7
CHUK-204ENST00000590930 HAO1Q9UJM8 370 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 DMTF1Q9Y222 760 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 THSD7AQ9UPZ6 1657 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 WEE2P0C1S8 567 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 M6PRP20645 277 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 MAGEA6P43360 314 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 ALDH3B2P48448 385 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 PTK6Q13882 451 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 CBX2Q14781 532 aaPredicted RBP4.44□□□□□ -1.7
CHUK-204ENST00000590930 FYB2Q5VWT5 728 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 CYP2U1Q7Z449 544 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 CATIPQ7Z7H3 387 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 LRRC34Q8IZ02 419 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 ARHGAP24Q8N264 748 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 PIGOQ8TEQ8 1089 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 TUBGCP4Q9UGJ1 667 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 ATP6V0A2Q9Y487 856 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 RALGAPA2Q2PPJ7 1873 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 PGRMC1O00264 195 aaKnown RBP4.44□□□□□ -1.7
CHUK-204ENST00000590930 EEF2KO00418 725 aaKnown RBP4.44□□□□□ -1.7
CHUK-204ENST00000590930 CCNT2O60583 730 aaKnown RBP4.44□□□□□ -1.7
CHUK-204ENST00000590930 TJP3O95049 919 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 IGKV5-2P06315 115 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 DESP17661 470 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 RPL17P18621 184 aaKnown RBP4.44□□□□□ -1.7
CHUK-204ENST00000590930 HDAC4P56524 1084 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 AMPD3Q01432 767 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 RFTN1Q14699 578 aaPredicted RBP4.44□□□□□ -1.7
CHUK-204ENST00000590930 CNGA3Q16281 694 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 TRMT5Q32P41 509 aaKnown RBP4.44□□□□□ -1.7
CHUK-204ENST00000590930 HDGFL1Q5TGJ6 251 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 DCLRE1AQ6PJP8 1040 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 LRRC55Q6ZSA7 311 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 EPM2AIP1Q7L775 607 aaPredicted RBP4.44□□□□□ -1.7
CHUK-204ENST00000590930 ZNF554Q86TJ5 538 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 CNBD1Q8NA66 436 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 CFAP57Q96MR6 1250 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 EPAS1Q99814 870 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 DEFB129Q9H1M3 183 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 TMEM60Q9H2L4 133 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 MRPL46Q9H2W6 279 aaKnown RBP4.44□□□□□ -1.7
CHUK-204ENST00000590930 TYW1Q9NV66 732 aaKnown RBP4.44□□□□□ -1.7
CHUK-204ENST00000590930 LMCD1Q9NZU5 365 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 ANGPTL2Q9UKU9 493 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 TMEM98Q9Y2Y6 226 aa4.44□□□□□ -1.7
CHUK-204ENST00000590930 CYP3A7-CYP3A51PA0A087WV96 503 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 DDX3YO15523 660 aaKnown RBP4.43□□□□□ -1.7
CHUK-204ENST00000590930 RPN1P04843 607 aaKnown RBP4.43□□□□□ -1.7
CHUK-204ENST00000590930 CD44P16070 742 aaKnown RBP4.43□□□□□ -1.7
CHUK-204ENST00000590930 CYP3A7P24462 503 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 LIG3P49916 1009 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 APLP1P51693 650 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 NAB1Q13506 487 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 STAT4Q14765 748 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 HERC3Q15034 1050 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 CAMK4Q16566 473 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 CCDC153Q494R4 210 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 KRT39Q6A163 491 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 ILDR2Q71H61 639 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 GSPT2Q8IYD1 628 aaKnown RBP4.43□□□□□ -1.7
CHUK-204ENST00000590930 CCDC89Q8N998 374 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 HM13Q8TCT9 377 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 FBF1Q8TES7 1133 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 P2RX5Q93086 422 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 ARL8AQ96BM9 186 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 SUCLG2Q96I99 432 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 DCAF5Q96JK2 942 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 FAM227BQ96M60 508 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 RMDN3Q96TC7 470 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 CCT7Q99832 543 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 EIF2AQ9BY44 585 aaKnown RBP4.43□□□□□ -1.7
CHUK-204ENST00000590930 ZNF219Q9P2Y4 722 aaPredicted RBP4.43□□□□□ -1.7
CHUK-204ENST00000590930 HESX1Q9UBX0 185 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 RASAL2Q9UJF2 1139 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 TAF1P21675 1872 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 EML1O00423 815 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 ZNF263O14978 683 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 EIF3DO15371 548 aaKnown RBP eCLIP4.43□□□□□ -1.7
CHUK-204ENST00000590930 PTCD1O75127 700 aaKnown RBP4.43□□□□□ -1.7
CHUK-204ENST00000590930 FKBP9O95302 570 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 CCNFP41002 786 aa4.43□□□□□ -1.7
CHUK-204ENST00000590930 SSRP1Q08945 709 aaKnown RBP4.43□□□□□ -1.7
CHUK-204ENST00000590930 LRRC23Q53EV4 343 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms