RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 POU5F1BQ06416 359 aa18.25■□□□□ 0.51
GCDH-213ENST00000590627 LAMTOR4Q0VGL1 99 aa18.25■□□□□ 0.51
GCDH-213ENST00000590627 DMP1Q13316 513 aaPredicted RBP18.25■□□□□ 0.51
GCDH-213ENST00000590627 STX1AQ16623 288 aa18.25■□□□□ 0.51
GCDH-213ENST00000590627 TIGD5Q53EQ6 642 aa18.25■□□□□ 0.51
GCDH-213ENST00000590627 EPM2AIP1Q7L775 607 aaPredicted RBP18.25■□□□□ 0.51
GCDH-213ENST00000590627 ZNF720Q7Z2F6 126 aa18.25■□□□□ 0.51
GCDH-213ENST00000590627 FAM178BQ8IXR5 827 aa18.25■□□□□ 0.51
GCDH-213ENST00000590627 NME8Q8N427 588 aa18.25■□□□□ 0.51
GCDH-213ENST00000590627 KIAA0895Q8NCT3 520 aa18.25■□□□□ 0.51
GCDH-213ENST00000590627 HPS3Q969F9 1004 aa18.25■□□□□ 0.51
GCDH-213ENST00000590627 MAP7D2Q96T17 732 aa18.25■□□□□ 0.51
GCDH-213ENST00000590627 STRA6Q9BX79 667 aa18.25■□□□□ 0.51
GCDH-213ENST00000590627 EPHX3Q9H6B9 360 aa18.25■□□□□ 0.51
GCDH-213ENST00000590627 H0YCG3 227 aa18.24■□□□□ 0.51
GCDH-213ENST00000590627 RBAK-RBAKDNI3L0D1 243 aa18.24■□□□□ 0.51
GCDH-213ENST00000590627 SMTNP53814 917 aa18.24■□□□□ 0.51
GCDH-213ENST00000590627 NCKAP1LP55160 1127 aa18.24■□□□□ 0.51
GCDH-213ENST00000590627 PEX3P56589 373 aa18.24■□□□□ 0.51
GCDH-213ENST00000590627 ALCAMQ13740 583 aa18.24■□□□□ 0.51
GCDH-213ENST00000590627 CT47A1Q5JQC4 288 aaPredicted RBP18.24■□□□□ 0.51
GCDH-213ENST00000590627 ISM2Q6H9L7 571 aa18.24■□□□□ 0.51
GCDH-213ENST00000590627 LRSAM1Q6UWE0 723 aa18.24■□□□□ 0.51
GCDH-213ENST00000590627 RUFY4Q6ZNE9 571 aa18.24■□□□□ 0.51
GCDH-213ENST00000590627 TMEM192Q8IY95 271 aa18.24■□□□□ 0.51
GCDH-213ENST00000590627 MRPL44Q9H9J2 332 aaKnown RBP18.24■□□□□ 0.51
GCDH-213ENST00000590627 SLC39A2Q9NP94 309 aa18.24■□□□□ 0.51
GCDH-213ENST00000590627 ARHGAP28Q9P2N2 729 aa18.24■□□□□ 0.51
GCDH-213ENST00000590627 GDAQ9Y2T3 454 aa18.24■□□□□ 0.51
GCDH-213ENST00000590627 EIF3DO15371 548 aaKnown RBP eCLIP18.23■□□□□ 0.51
GCDH-213ENST00000590627 PPP1R37O75864 691 aa18.23■□□□□ 0.51
GCDH-213ENST00000590627 CHRNA1P02708 482 aa18.23■□□□□ 0.51
GCDH-213ENST00000590627 KCNA5P22460 613 aa18.23■□□□□ 0.51
GCDH-213ENST00000590627 ABCD1P33897 745 aa18.23■□□□□ 0.51
GCDH-213ENST00000590627 PPP1R2P41236 205 aa18.23■□□□□ 0.51
GCDH-213ENST00000590627 GPM6BQ13491 265 aa18.23■□□□□ 0.51
GCDH-213ENST00000590627 CAPSQ13938 189 aa18.23■□□□□ 0.51
GCDH-213ENST00000590627 TFDP1Q14186 410 aa18.23■□□□□ 0.51
GCDH-213ENST00000590627 BMT2Q1RMZ1 405 aa18.23■□□□□ 0.51
GCDH-213ENST00000590627 PUS10Q3MIT2 529 aaKnown RBP18.23■□□□□ 0.51
GCDH-213ENST00000590627 DPCR1Q3MIW9 517 aa18.23■□□□□ 0.51
GCDH-213ENST00000590627 RSPH3Q86UC2 560 aa18.23■□□□□ 0.51
GCDH-213ENST00000590627 IFNLR1Q8IU57 520 aaPredicted RBP18.23■□□□□ 0.51
GCDH-213ENST00000590627 GUF1Q8N442 669 aaKnown RBP18.23■□□□□ 0.51
GCDH-213ENST00000590627 TMEM161BQ8NDZ6 487 aa18.23■□□□□ 0.51
GCDH-213ENST00000590627 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.23■□□□□ 0.51
GCDH-213ENST00000590627 LRFN3Q9BTN0 628 aa18.23■□□□□ 0.51
GCDH-213ENST00000590627 NFKBIZQ9BYH8 718 aa18.23■□□□□ 0.51
GCDH-213ENST00000590627 KMT5AQ9NQR1 393 aa18.23■□□□□ 0.51
GCDH-213ENST00000590627 TBC1D7Q9P0N9 293 aa18.23■□□□□ 0.51
GCDH-213ENST00000590627 ARIH1Q9Y4X5 557 aaPredicted RBP18.23■□□□□ 0.51
GCDH-213ENST00000590627 CCDC169A6NNP5 214 aa18.22■□□□□ 0.51
GCDH-213ENST00000590627 PPP1R3GB7ZBB8 358 aa18.22■□□□□ 0.51
GCDH-213ENST00000590627 CAVIN2O95810 425 aa18.22■□□□□ 0.51
GCDH-213ENST00000590627 NMT1P30419 496 aaKnown RBP18.22■□□□□ 0.51
GCDH-213ENST00000590627 PLA2G5P39877 138 aa18.22■□□□□ 0.51
GCDH-213ENST00000590627 GTF2BQ00403 316 aa18.22■□□□□ 0.51
GCDH-213ENST00000590627 MGAT3Q09327 533 aa18.22■□□□□ 0.51
GCDH-213ENST00000590627 TMEM31Q5JXX7 168 aa18.22■□□□□ 0.51
GCDH-213ENST00000590627 CDCA2Q69YH5 1023 aaPredicted RBP18.22■□□□□ 0.51
GCDH-213ENST00000590627 STXBP4Q6ZWJ1 553 aa18.22■□□□□ 0.51
GCDH-213ENST00000590627 ZNF410Q86VK4 478 aa18.22■□□□□ 0.51
GCDH-213ENST00000590627 RHPN2Q8IUC4 686 aa18.22■□□□□ 0.51
GCDH-213ENST00000590627 ADSSL1Q8N142 457 aa18.22■□□□□ 0.51
GCDH-213ENST00000590627 ZNF507Q8TCN5 953 aa18.22■□□□□ 0.51
GCDH-213ENST00000590627 SCFD1Q8WVM8 642 aa18.22■□□□□ 0.51
GCDH-213ENST00000590627 DNAJB3Q8WWF6 145 aa18.22■□□□□ 0.51
GCDH-213ENST00000590627 HVCN1Q96D96 273 aa18.22■□□□□ 0.51
GCDH-213ENST00000590627 FGFBP2Q9BYJ0 223 aa18.22■□□□□ 0.51
GCDH-213ENST00000590627 DACH1Q9UI36 760 aa18.22■□□□□ 0.51
GCDH-213ENST00000590627 AKT3Q9Y243 479 aa18.22■□□□□ 0.51
GCDH-213ENST00000590627 RWDD3Q9Y3V2 267 aa18.22■□□□□ 0.51
GCDH-213ENST00000590627 PCDHB13Q9Y5F0 798 aa18.22■□□□□ 0.51
GCDH-213ENST00000590627 UBE4BO95155 1302 aa18.22■□□□□ 0.51
GCDH-213ENST00000590627 PI4K2BG5E9Z4 385 aa18.21■□□□□ 0.51
GCDH-213ENST00000590627 SLC16A4O15374 487 aa18.21■□□□□ 0.51
GCDH-213ENST00000590627 GPR37L1O60883 481 aa18.21■□□□□ 0.51
GCDH-213ENST00000590627 GPR32O75388 356 aa18.21■□□□□ 0.51
GCDH-213ENST00000590627 KIF20AO95235 890 aa18.21■□□□□ 0.51
GCDH-213ENST00000590627 RB1P06400 928 aa18.21■□□□□ 0.51
GCDH-213ENST00000590627 MYBP10242 640 aa18.21■□□□□ 0.51
GCDH-213ENST00000590627 GHRP10912 638 aa18.21■□□□□ 0.51
GCDH-213ENST00000590627 CD44P16070 742 aaKnown RBP18.21■□□□□ 0.51
GCDH-213ENST00000590627 PRCPP42785 496 aa18.21■□□□□ 0.51
GCDH-213ENST00000590627 GPC3P51654 580 aa18.21■□□□□ 0.51
GCDH-213ENST00000590627 CASP5P51878 434 aa18.21■□□□□ 0.51
GCDH-213ENST00000590627 EFNA5P52803 228 aa18.21■□□□□ 0.51
GCDH-213ENST00000590627 HAUS6Q7Z4H7 955 aa18.21■□□□□ 0.51
GCDH-213ENST00000590627 KSR1Q8IVT5 923 aa18.21■□□□□ 0.51
GCDH-213ENST00000590627 SMYD4Q8IYR2 804 aaPredicted RBP18.21■□□□□ 0.51
GCDH-213ENST00000590627 FIBCD1Q8N539 461 aa18.21■□□□□ 0.51
GCDH-213ENST00000590627 RNF149Q8NC42 400 aa18.21■□□□□ 0.51
GCDH-213ENST00000590627 GLIS3Q8NEA6 775 aa18.21■□□□□ 0.51
GCDH-213ENST00000590627 DEPTORQ8TB45 409 aa18.21■□□□□ 0.51
GCDH-213ENST00000590627 PABPC5Q96DU9 382 aaKnown RBP18.21■□□□□ 0.51
GCDH-213ENST00000590627 DHTKD1Q96HY7 919 aaPredicted RBP18.21■□□□□ 0.51
GCDH-213ENST00000590627 FAM49AQ9H0Q0 323 aaPredicted RBP18.21■□□□□ 0.51
GCDH-213ENST00000590627 C2orf40Q9H1Z8 148 aa18.21■□□□□ 0.51
GCDH-213ENST00000590627 ADAMTS10Q9H324 1103 aa18.21■□□□□ 0.51
GCDH-213ENST00000590627 TMEM134Q9H6X4 195 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms