RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 MAPK7Q13164 816 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 ARL6IP4Q66PJ3 421 aaKnown RBP16.25■□□□□ 0.19
CIRBP-228ENST00000590347 C4orf50Q6ZRC1 276 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 ANKRD23Q86SG2 305 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 SATL1Q86VE3 508 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 SLC35G2Q8TBE7 412 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 JDP2Q8WYK2 163 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 ARHGEF26Q96DR7 871 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 PLA2G12BQ9BX93 195 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 RIC1Q4ADV7 1423 aa16.24■□□□□ 0.19
CIRBP-228ENST00000590347 BHMG1C9JSJ3 638 aaPredicted RBP16.24■□□□□ 0.19
CIRBP-228ENST00000590347 O00370 1275 aa16.24■□□□□ 0.19
CIRBP-228ENST00000590347 MARK3P27448 753 aa16.24■□□□□ 0.19
CIRBP-228ENST00000590347 WDR4P57081 412 aaKnown RBP16.24■□□□□ 0.19
CIRBP-228ENST00000590347 MTFR1Q15390 333 aa16.24■□□□□ 0.19
CIRBP-228ENST00000590347 SV2BQ7L1I2 683 aa16.24■□□□□ 0.19
CIRBP-228ENST00000590347 IRF2BP2Q7Z5L9 587 aa16.24■□□□□ 0.19
CIRBP-228ENST00000590347 AMIGO3Q86WK7 504 aa16.24■□□□□ 0.19
CIRBP-228ENST00000590347 GATA6Q92908 595 aa16.24■□□□□ 0.19
CIRBP-228ENST00000590347 C9orf72Q96LT7 481 aa16.24■□□□□ 0.19
CIRBP-228ENST00000590347 HSFX1Q9UBD0 423 aa16.24■□□□□ 0.19
CIRBP-228ENST00000590347 MTRF1LQ9UGC7 380 aaKnown RBP16.24■□□□□ 0.19
CIRBP-228ENST00000590347 NHSL1Q5SYE7 1610 aa16.24■□□□□ 0.19
CIRBP-228ENST00000590347 BAG3O95817 575 aa16.24■□□□□ 0.19
CIRBP-228ENST00000590347 EIF4BP23588 611 aaKnown RBP16.24■□□□□ 0.19
CIRBP-228ENST00000590347 GYG1P46976 350 aa16.24■□□□□ 0.19
CIRBP-228ENST00000590347 BTKQ06187 659 aa16.24■□□□□ 0.19
CIRBP-228ENST00000590347 TTLL12Q14166 644 aaPredicted RBP16.24■□□□□ 0.19
CIRBP-228ENST00000590347 CYP4F22Q6NT55 531 aa16.24■□□□□ 0.19
CIRBP-228ENST00000590347 ARMCX6Q7L4S7 300 aa16.24■□□□□ 0.19
CIRBP-228ENST00000590347 SPATA24Q86W54 205 aa16.24■□□□□ 0.19
CIRBP-228ENST00000590347 VGLL2Q8N8G2 317 aa16.24■□□□□ 0.19
CIRBP-228ENST00000590347 EIF1ADQ8N9N8 165 aaKnown RBP16.24■□□□□ 0.19
CIRBP-228ENST00000590347 CEP70Q8NHQ1 597 aa16.24■□□□□ 0.19
CIRBP-228ENST00000590347 CLMNQ96JQ2 1002 aa16.24■□□□□ 0.19
CIRBP-228ENST00000590347 CLPTM1LQ96KA5 538 aa16.24■□□□□ 0.19
CIRBP-228ENST00000590347 MMTAG2Q9BU76 263 aaKnown RBP16.24■□□□□ 0.19
CIRBP-228ENST00000590347 TAS2R14Q9NYV8 317 aa16.24■□□□□ 0.19
CIRBP-228ENST00000590347 RTL9Q8NET4 1388 aa16.24■□□□□ 0.19
CIRBP-228ENST00000590347 LAMB4A4D0S4 1761 aa16.24■□□□□ 0.19
CIRBP-228ENST00000590347 MAP3K7O43318 606 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 CYP2D6P10635 497 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 PPFIBP2Q8ND30 876 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 SEC14L1Q92503 715 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 DDX12PQ92771 950 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 STMN2Q93045 179 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 ERVV-1B6SEH8 477 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 DDX3XO00571 662 aaKnown RBP eCLIP16.23■□□□□ 0.191e-13■■■□□ 16.1
CIRBP-228ENST00000590347 EXOC3O60645 756 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 RNASEH1O60930 286 aaKnown RBP16.23■□□□□ 0.19
CIRBP-228ENST00000590347 PSMC4P43686 418 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 TJP1Q07157 1748 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 KCNH2Q12809 1159 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 LIN52Q52LA3 116 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 CCDC137Q6PK04 289 aaKnown RBP16.23■□□□□ 0.19
CIRBP-228ENST00000590347 UBR2Q8IWV8 1755 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 PDCD7Q8N8D1 485 aaKnown RBP16.23■□□□□ 0.19
CIRBP-228ENST00000590347 ENDOVQ8N8Q3 282 aaKnown RBP16.23■□□□□ 0.19
CIRBP-228ENST00000590347 TIPINQ9BVW5 301 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 IKZF4Q9H2S9 585 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 ATP8A2Q9NTI2 1148 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 ZFP69BQ9UJL9 534 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 A0A0G2JND7 137 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 CHRNB2P17787 502 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 PLOD1Q02809 727 aaPredicted RBP16.23■□□□□ 0.19
CIRBP-228ENST00000590347 CBX3Q13185 183 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 PARP6Q2NL67 630 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 SDCCAG8Q86SQ7 713 aaPredicted RBP16.23■□□□□ 0.19
CIRBP-228ENST00000590347 SHKBP1Q8TBC3 707 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 MCUR1Q96AQ8 359 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 SMC6Q96SB8 1091 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 TSG101Q99816 390 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 PCDHA6Q9UN73 950 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 PCDHA8Q9Y5H6 950 aa16.23■□□□□ 0.19
CIRBP-228ENST00000590347 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.23■□□□□ 0.19
CIRBP-228ENST00000590347 ABLIM1O14639 778 aa16.22■□□□□ 0.19
CIRBP-228ENST00000590347 ZBED4O75132 1171 aa16.22■□□□□ 0.19
CIRBP-228ENST00000590347 MTM1Q13496 603 aa16.22■□□□□ 0.19
CIRBP-228ENST00000590347 RRP1BQ14684 758 aaKnown RBP16.22■□□□□ 0.19
CIRBP-228ENST00000590347 RNF43Q68DV7 783 aa16.22■□□□□ 0.19
CIRBP-228ENST00000590347 VPS52Q8N1B4 723 aa16.22■□□□□ 0.19
CIRBP-228ENST00000590347 PRELID2Q8N945 189 aa16.22■□□□□ 0.19
CIRBP-228ENST00000590347 C1orf54Q8WWF1 131 aa16.22■□□□□ 0.19
CIRBP-228ENST00000590347 DTNBP1Q96EV8 351 aa16.22■□□□□ 0.19
CIRBP-228ENST00000590347 C7orf25Q9BPX7 421 aa16.22■□□□□ 0.19
CIRBP-228ENST00000590347 UBA5Q9GZZ9 404 aa16.22■□□□□ 0.19
CIRBP-228ENST00000590347 FBXO6Q9NRD1 293 aaPredicted RBP16.22■□□□□ 0.19
CIRBP-228ENST00000590347 ARL8BQ9NVJ2 186 aa16.22■□□□□ 0.19
CIRBP-228ENST00000590347 TXNDC9O14530 226 aa16.22■□□□□ 0.19
CIRBP-228ENST00000590347 CAPN15O75808 1086 aa16.22■□□□□ 0.19
CIRBP-228ENST00000590347 GSTA2P09210 222 aa16.22■□□□□ 0.19
CIRBP-228ENST00000590347 PYGMP11217 842 aa16.22■□□□□ 0.19
CIRBP-228ENST00000590347 GRIA2P42262 883 aa16.22■□□□□ 0.19
CIRBP-228ENST00000590347 PUM3Q15397 648 aaKnown RBP16.22■□□□□ 0.19
CIRBP-228ENST00000590347 ALX1Q15699 326 aa16.22■□□□□ 0.19
CIRBP-228ENST00000590347 PHLDB2Q86SQ0 1253 aa16.22■□□□□ 0.19
CIRBP-228ENST00000590347 RASGEF1CQ8N431 466 aa16.22■□□□□ 0.19
CIRBP-228ENST00000590347 SH3TC2Q8TF17 1288 aa16.22■□□□□ 0.19
CIRBP-228ENST00000590347 BTBD6Q96KE9 485 aa16.22■□□□□ 0.19
CIRBP-228ENST00000590347 CCSER1Q9C0I3 900 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms