RNA–Protein interactions for RNA: ENST00000590099.5

BECN1-213, Transcript of beclin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BECN1, Length 2,087 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-213ENST00000590099 SPIRE2Q8WWL2 714 aa17.42■□□□□ 0.38
BECN1-213ENST00000590099 AS3MTQ9HBK9 375 aa17.42■□□□□ 0.38
BECN1-213ENST00000590099 DICER1Q9UPY3 1922 aaKnown RBP17.41■□□□□ 0.38
BECN1-213ENST00000590099 DENND3A2RUS2 1198 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 FTLP02792 175 aaPredicted RBP17.41■□□□□ 0.38
BECN1-213ENST00000590099 SLC39A4Q6P5W5 647 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 LRRC31Q6UY01 552 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 OTUD6AQ7L8S5 288 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 RHOT2Q8IXI1 618 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 SEMA4DQ92854 862 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 ARL8AQ96BM9 186 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 SAAL1Q96ER3 474 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 C12orf42Q96LP6 360 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 KREMEN1Q96MU8 473 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 WRNIP1Q96S55 665 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 KMT5AQ9NQR1 393 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 PDLIM7Q9NR12 457 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 GABBR1Q9UBS5 961 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 DIS3Q9Y2L1 958 aaKnown RBP17.41■□□□□ 0.38
BECN1-213ENST00000590099 COQ4Q9Y3A0 265 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 PFASO15067 1338 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 FAM170AA1A519 330 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 SHOX2O60902 331 aaPredicted RBP17.41■□□□□ 0.38
BECN1-213ENST00000590099 SGPL1O95470 568 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 CHRNB2P17787 502 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 HIRAP54198 1017 aaPredicted RBP17.41■□□□□ 0.38
BECN1-213ENST00000590099 HMGCS2P54868 508 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 SOX10P56693 466 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 MAP2K1Q02750 393 aaPredicted RBP17.41■□□□□ 0.38
BECN1-213ENST00000590099 CUL1Q13616 776 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 TTMPQ5BVD1 217 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 PRAMEF18Q5VWM3 479 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 RPUSD2Q8IZ73 545 aaKnown RBP17.41■□□□□ 0.38
BECN1-213ENST00000590099 GPC2Q8N158 579 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 PROCA1Q8NCQ7 364 aaPredicted RBP17.41■□□□□ 0.38
BECN1-213ENST00000590099 NSUN6Q8TEA1 469 aaKnown RBP17.41■□□□□ 0.38
BECN1-213ENST00000590099 KIFAP3Q92845 792 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 CEP170P1Q96L14 293 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 FBXL18Q96ME1 805 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 RUFY1Q96T51 708 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 C17orf75Q9HAS0 396 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 PICK1Q9NRD5 415 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 NOCTQ9UK39 431 aaKnown RBP17.41■□□□□ 0.38
BECN1-213ENST00000590099 FZD1Q9UP38 647 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 TELO2Q9Y4R8 837 aa17.41■□□□□ 0.38
BECN1-213ENST00000590099 COL11A1P12107 1806 aaPredicted RBP17.4■□□□□ 0.38
BECN1-213ENST00000590099 ZNF233A6NK53 670 aa17.4■□□□□ 0.38
BECN1-213ENST00000590099 POU5F1Q01860 360 aaKnown RBP17.4■□□□□ 0.38
BECN1-213ENST00000590099 TMEM132BQ14DG7 1078 aa17.4■□□□□ 0.38
BECN1-213ENST00000590099 CFAP58Q5T655 872 aa17.4■□□□□ 0.38
BECN1-213ENST00000590099 KRT39Q6A163 491 aa17.4■□□□□ 0.38
BECN1-213ENST00000590099 EPS8L1Q8TE68 723 aa17.4■□□□□ 0.38
BECN1-213ENST00000590099 MFSD14AQ96MC6 490 aa17.4■□□□□ 0.38
BECN1-213ENST00000590099 PCDHB18PQ96TA0 734 aa17.4■□□□□ 0.38
BECN1-213ENST00000590099 CARD9Q9H257 536 aa17.4■□□□□ 0.38
BECN1-213ENST00000590099 SLITRK6Q9H5Y7 841 aa17.4■□□□□ 0.38
BECN1-213ENST00000590099 AMACRQ9UHK6 382 aa17.4■□□□□ 0.38
BECN1-213ENST00000590099 ATP2A1O14983 1001 aa17.4■□□□□ 0.38
BECN1-213ENST00000590099 RTN2O75298 545 aa17.4■□□□□ 0.38
BECN1-213ENST00000590099 FGGP02679 453 aa17.4■□□□□ 0.38
BECN1-213ENST00000590099 HSPA9P38646 679 aaKnown RBP17.4■□□□□ 0.38
BECN1-213ENST00000590099 SWSAP1Q6NVH7 229 aa17.4■□□□□ 0.38
BECN1-213ENST00000590099 NOP9Q86U38 636 aaKnown RBP17.4■□□□□ 0.38
BECN1-213ENST00000590099 SHC3Q92529 594 aa17.4■□□□□ 0.38
BECN1-213ENST00000590099 ATP6V0A1Q93050 837 aa17.4■□□□□ 0.38
BECN1-213ENST00000590099 CCDC127Q96BQ5 260 aa17.4■□□□□ 0.38
BECN1-213ENST00000590099 POP1Q99575 1024 aaKnown RBP17.4■□□□□ 0.38
BECN1-213ENST00000590099 NR2E1Q9Y466 385 aa17.4■□□□□ 0.38
BECN1-213ENST00000590099 ALG6Q9Y672 507 aa17.4■□□□□ 0.38
BECN1-213ENST00000590099 WDR81Q562E7 1941 aa17.39■□□□□ 0.38
BECN1-213ENST00000590099 SSC5DA1L4H1 1573 aa17.39■□□□□ 0.37
BECN1-213ENST00000590099 ADGRA3Q8IWK6 1321 aa17.39■□□□□ 0.37
BECN1-213ENST00000590099 KRT14P02533 472 aa17.39■□□□□ 0.37
BECN1-213ENST00000590099 GZMAP12544 262 aa17.39■□□□□ 0.37
BECN1-213ENST00000590099 USP8P40818 1118 aa17.39■□□□□ 0.37
BECN1-213ENST00000590099 GPC3P51654 580 aa17.39■□□□□ 0.37
BECN1-213ENST00000590099 GPC5P78333 572 aa17.39■□□□□ 0.37
BECN1-213ENST00000590099 DDX42Q86XP3 938 aaKnown RBP eCLIP17.39■□□□□ 0.37
BECN1-213ENST00000590099 CD302Q8IX05 232 aa17.39■□□□□ 0.37
BECN1-213ENST00000590099 PPM1KQ8N3J5 372 aa17.39■□□□□ 0.37
BECN1-213ENST00000590099 TMC2Q8TDI7 906 aa17.39■□□□□ 0.37
BECN1-213ENST00000590099 SEC14L1Q92503 715 aa17.39■□□□□ 0.37
BECN1-213ENST00000590099 TMEM8AQ9HCN3 771 aa17.39■□□□□ 0.37
BECN1-213ENST00000590099 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.39■□□□□ 0.372e-6■■■■■ 182.2
BECN1-213ENST00000590099 CYP39A1Q9NYL5 469 aa17.39■□□□□ 0.37
BECN1-213ENST00000590099 GGA3Q9NZ52 723 aa17.39■□□□□ 0.37
BECN1-213ENST00000590099 NFASCO94856 1347 aa17.38■□□□□ 0.37
BECN1-213ENST00000590099 C19orf81C9J6K1 198 aa17.38■□□□□ 0.37
BECN1-213ENST00000590099 CYP26A1O43174 497 aa17.38■□□□□ 0.37
BECN1-213ENST00000590099 PSAPP07602 524 aa17.38■□□□□ 0.37
BECN1-213ENST00000590099 MFAP3P55082 362 aa17.38■□□□□ 0.37
BECN1-213ENST00000590099 PRPF4BQ13523 1007 aaKnown RBP17.38■□□□□ 0.37
BECN1-213ENST00000590099 HLTFQ14527 1009 aaKnown RBP eCLIP17.38■□□□□ 0.37
BECN1-213ENST00000590099 MAATS1Q7Z4T9 603 aa17.38■□□□□ 0.37
BECN1-213ENST00000590099 CCDC26Q8TAB7 109 aa17.38■□□□□ 0.37
BECN1-213ENST00000590099 HELQQ8TDG4 1101 aa17.38■□□□□ 0.37
BECN1-213ENST00000590099 ALG3Q92685 438 aa17.38■□□□□ 0.37
BECN1-213ENST00000590099 RNPC3Q96LT9 517 aaKnown RBP17.38■□□□□ 0.37
BECN1-213ENST00000590099 ACP6Q9NPH0 428 aa17.38■□□□□ 0.37
BECN1-213ENST00000590099 XPNPEP1Q9NQW7 623 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms