RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 CCDC60Q8IWA6 550 aaPredicted RBP6.93□□□□□ -1.3
VPS25-204ENST00000589577 NPAS3Q8IXF0 933 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 TNPO1Q92973 898 aaKnown RBP6.93□□□□□ -1.3
VPS25-204ENST00000589577 B3GALT6Q96L58 329 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 TRAIPQ9BWF2 469 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 PLEKHA4Q9H4M7 779 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 JADE2Q9NQC1 790 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 ZSWIM5Q9P217 1185 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 ANKFY1Q9P2R3 1169 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 DACH1Q9UI36 760 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 KLK13Q9UKR3 277 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 MRPS17Q9Y2R5 130 aaKnown RBP6.93□□□□□ -1.3
VPS25-204ENST00000589577 NEUROG3Q9Y4Z2 214 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 ATMQ13315 3056 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 TTC41PQ6P2S7 1318 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 VWA8A3KMH1 1905 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 KIF26AQ9ULI4 1882 aaPredicted RBP6.92□□□□□ -1.3
VPS25-204ENST00000589577 ASXL3Q9C0F0 2248 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 PLXNB3Q9ULL4 1909 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 SHROOM3Q8TF72 1996 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 CARNS1A5YM72 827 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 NRP1O14786 923 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 C1QL1O75973 258 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 CHRNB1P11230 501 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 FCARP24071 287 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 GLUD2P49448 558 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 DSG1Q02413 1049 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 NUCB1Q02818 461 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 RNASELQ05823 741 aaKnown RBP6.92□□□□□ -1.3
VPS25-204ENST00000589577 TROAPQ12815 778 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 ZNF484Q5JVG2 852 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 RNF43Q68DV7 783 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 ELMSAN1Q6PJG2 1045 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 GLB1LQ6UWU2 654 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 ABHD15Q6UXT9 468 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 Q6ZS52 159 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 KBTBD6Q86V97 674 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 GLYCTKQ8IVS8 523 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 METTL13Q8N6R0 699 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 SMARCC2Q8TAQ2 1214 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 RSPH1Q8WYR4 309 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 MBOAT7Q96N66 472 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 LNPKQ9C0E8 428 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 RNF41Q9H4P4 317 aaPredicted RBP6.92□□□□□ -1.3
VPS25-204ENST00000589577 LMAN1LQ9HAT1 526 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 HELLSQ9NRZ9 838 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 KCNH7Q9NS40 1196 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 STK39Q9UEW8 545 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 DPP7Q9UHL4 492 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 MSRB2Q9Y3D2 182 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 NFASCO94856 1347 aa6.92□□□□□ -1.3
VPS25-204ENST00000589577 PTPN13Q12923 2485 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 USP9XQ93008 2570 aaPredicted RBP6.91□□□□□ -1.3
VPS25-204ENST00000589577 C4orf47A7E2U8 309 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 MAFGO15525 162 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 GAS2O43903 313 aaKnown RBP6.91□□□□□ -1.3
VPS25-204ENST00000589577 ECI2O75521 394 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 C1RP00736 705 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 IGHDP01880 384 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 PRB1P04280 392 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 RPL17P18621 184 aaKnown RBP6.91□□□□□ -1.3
VPS25-204ENST00000589577 MPLP40238 635 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 GPC3P51654 580 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 TRAF1Q13077 416 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 GRM4Q14833 912 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 CCDC178Q5BJE1 867 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 AGMOQ6ZNB7 445 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 CEP68Q76N32 757 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 WDR5BQ86VZ2 330 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 SPEM1Q8N4L4 309 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 LRRC71Q8N4P6 559 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 GLIS3Q8NEA6 775 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 PIBF1Q8WXW3 757 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 ING5Q8WYH8 240 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 DNASE1L2Q92874 299 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 LOXL4Q96JB6 756 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 TMEM175Q9BSA9 504 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 EDEM2Q9BV94 578 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 SENP2Q9HC62 589 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 CHST7Q9NS84 486 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 IGSF5Q9NSI5 407 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 RBM12Q9NTZ6 932 aaKnown RBP6.91□□□□□ -1.3
VPS25-204ENST00000589577 HCFC1R1Q9NWW0 138 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 DACT1Q9NYF0 836 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 FBXW11Q9UKB1 542 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 AKT3Q9Y243 479 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 NCANO14594 1321 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 SALL3Q9BXA9 1300 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 PIEZO2Q9H5I5 2752 aa6.91□□□□□ -1.3
VPS25-204ENST00000589577 SPTA1P02549 2419 aa6.9□□□□□ -1.3
VPS25-204ENST00000589577 TNRC6BQ9UPQ9 1833 aaKnown RBP6.9□□□□□ -1.3
VPS25-204ENST00000589577 LNP1A1A4G5 178 aa6.9□□□□□ -1.3
VPS25-204ENST00000589577 MAN2B1O00754 1011 aa6.9□□□□□ -1.3
VPS25-204ENST00000589577 CCL16O15467 120 aa6.9□□□□□ -1.3
VPS25-204ENST00000589577 EIF5BO60841 1220 aaKnown RBP6.9□□□□□ -1.3
VPS25-204ENST00000589577 ZNF623O75123 536 aa6.9□□□□□ -1.3
VPS25-204ENST00000589577 CEACAM1P13688 526 aa6.9□□□□□ -1.3
VPS25-204ENST00000589577 MX1P20591 662 aa6.9□□□□□ -1.3
VPS25-204ENST00000589577 CSRP1P21291 193 aaKnown RBP6.9□□□□□ -1.3
VPS25-204ENST00000589577 HOXA6P31267 233 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms