RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 GLIS3Q8NEA6 775 aa24.64■■□□□ 1.54
R3HDM4-205ENST00000589445 ADPGKQ9BRR6 497 aa24.64■■□□□ 1.54
R3HDM4-205ENST00000589445 ZBED2Q9BTP6 218 aa24.64■■□□□ 1.54
R3HDM4-205ENST00000589445 TARS2Q9BW92 718 aaKnown RBP24.64■■□□□ 1.54
R3HDM4-205ENST00000589445 SMC2O95347 1197 aa24.63■■□□□ 1.53
R3HDM4-205ENST00000589445 SCP2P22307 547 aa24.63■■□□□ 1.53
R3HDM4-205ENST00000589445 MCM4P33991 863 aa24.63■■□□□ 1.53
R3HDM4-205ENST00000589445 RAB27AP51159 221 aa24.63■■□□□ 1.53
R3HDM4-205ENST00000589445 ALCAMQ13740 583 aa24.63■■□□□ 1.53
R3HDM4-205ENST00000589445 NT5DC1Q5TFE4 455 aa24.63■■□□□ 1.53
R3HDM4-205ENST00000589445 FAM109BQ6ICB4 259 aaPredicted RBP24.63■■□□□ 1.53
R3HDM4-205ENST00000589445 SLC27A1Q6PCB7 646 aa24.63■■□□□ 1.53
R3HDM4-205ENST00000589445 ZNF720Q7Z2F6 126 aa24.63■■□□□ 1.53
R3HDM4-205ENST00000589445 SMARCE1Q969G3 411 aa24.63■■□□□ 1.53
R3HDM4-205ENST00000589445 HVCN1Q96D96 273 aa24.63■■□□□ 1.53
R3HDM4-205ENST00000589445 APOL6Q9BWW8 343 aa24.63■■□□□ 1.53
R3HDM4-205ENST00000589445 COL25A1Q9BXS0 654 aaPredicted RBP24.63■■□□□ 1.53
R3HDM4-205ENST00000589445 EIF2AQ9BY44 585 aaKnown RBP24.63■■□□□ 1.53
R3HDM4-205ENST00000589445 SLC39A2Q9NP94 309 aa24.63■■□□□ 1.53
R3HDM4-205ENST00000589445 FAM105AQ9NUU6 356 aa24.63■■□□□ 1.53
R3HDM4-205ENST00000589445 FNDC1Q4ZHG4 1894 aaPredicted RBP24.62■■□□□ 1.53
R3HDM4-205ENST00000589445 C9IYK1 514 aa24.62■■□□□ 1.53
R3HDM4-205ENST00000589445 GTF2BQ00403 316 aa24.62■■□□□ 1.53
R3HDM4-205ENST00000589445 CAMK4Q16566 473 aa24.62■■□□□ 1.53
R3HDM4-205ENST00000589445 L1TD1Q5T7N2 865 aaKnown RBP24.62■■□□□ 1.53
R3HDM4-205ENST00000589445 EEF1DP3Q658K8 133 aa24.62■■□□□ 1.53
R3HDM4-205ENST00000589445 NPAS4Q8IUM7 802 aa24.62■■□□□ 1.53
R3HDM4-205ENST00000589445 MAP4K3Q8IVH8 894 aa24.62■■□□□ 1.53
R3HDM4-205ENST00000589445 HERC6Q8IVU3 1022 aa24.62■■□□□ 1.53
R3HDM4-205ENST00000589445 ST6GALNAC4Q9H4F1 302 aa24.62■■□□□ 1.53
R3HDM4-205ENST00000589445 KIAA1671Q9BY89 1806 aa24.61■■□□□ 1.53
R3HDM4-205ENST00000589445 GRXCR1A8MXD5 290 aa24.61■■□□□ 1.53
R3HDM4-205ENST00000589445 PPP1R37O75864 691 aa24.61■■□□□ 1.53
R3HDM4-205ENST00000589445 PRPF6O94906 941 aaKnown RBP24.61■■□□□ 1.53
R3HDM4-205ENST00000589445 STAG3L1P0CL83 205 aa24.61■■□□□ 1.53
R3HDM4-205ENST00000589445 UBXN11Q5T124 520 aa24.61■■□□□ 1.53
R3HDM4-205ENST00000589445 FAM43BQ6ZT52 329 aaPredicted RBP24.61■■□□□ 1.53
R3HDM4-205ENST00000589445 Q7L0L9 218 aa24.61■■□□□ 1.53
R3HDM4-205ENST00000589445 APBB1IPQ7Z5R6 666 aaPredicted RBP24.61■■□□□ 1.53
R3HDM4-205ENST00000589445 ZBTB33Q86T24 672 aa24.61■■□□□ 1.53
R3HDM4-205ENST00000589445 ECHDC2Q86YB7 292 aa24.61■■□□□ 1.53
R3HDM4-205ENST00000589445 SYCP3Q8IZU3 236 aa24.61■■□□□ 1.53
R3HDM4-205ENST00000589445 GPT2Q8TD30 523 aa24.61■■□□□ 1.53
R3HDM4-205ENST00000589445 ACCSQ96QU6 501 aa24.61■■□□□ 1.53
R3HDM4-205ENST00000589445 ACO2Q99798 780 aaKnown RBP24.61■■□□□ 1.53
R3HDM4-205ENST00000589445 TCHPQ9BT92 498 aa24.61■■□□□ 1.53
R3HDM4-205ENST00000589445 RMND1Q9NWS8 449 aa24.61■■□□□ 1.53
R3HDM4-205ENST00000589445 EXOC7Q9UPT5 735 aa24.61■■□□□ 1.53
R3HDM4-205ENST00000589445 PCDHB7Q9Y5E2 793 aa24.61■■□□□ 1.53
R3HDM4-205ENST00000589445 PCDHB2Q9Y5E7 798 aa24.61■■□□□ 1.53
R3HDM4-205ENST00000589445 PCDHB13Q9Y5F0 798 aa24.61■■□□□ 1.53
R3HDM4-205ENST00000589445 LAMA2P24043 3122 aaKnown RBP24.6■■□□□ 1.53
R3HDM4-205ENST00000589445 RALGAPA2Q2PPJ7 1873 aa24.6■■□□□ 1.53
R3HDM4-205ENST00000589445 A0A1B0GUA9 196 aa24.6■■□□□ 1.53
R3HDM4-205ENST00000589445 MBD3O95983 291 aa24.6■■□□□ 1.53
R3HDM4-205ENST00000589445 SKIP12755 728 aa24.6■■□□□ 1.53
R3HDM4-205ENST00000589445 RABGGTBP53611 331 aa24.6■■□□□ 1.53
R3HDM4-205ENST00000589445 EHHADHQ08426 723 aa24.6■■□□□ 1.53
R3HDM4-205ENST00000589445 DCAF4L1Q3SXM0 396 aa24.6■■□□□ 1.53
R3HDM4-205ENST00000589445 LPPQ93052 612 aa24.6■■□□□ 1.53
R3HDM4-205ENST00000589445 YME1L1Q96TA2 773 aa24.6■■□□□ 1.53
R3HDM4-205ENST00000589445 NUP62CLQ9H1M0 184 aa24.6■■□□□ 1.53
R3HDM4-205ENST00000589445 CLSTN2Q9H4D0 955 aa24.6■■□□□ 1.53
R3HDM4-205ENST00000589445 NXF3Q9H4D5 531 aaKnown RBP24.6■■□□□ 1.53
R3HDM4-205ENST00000589445 RNF216Q9NWF9 866 aaPredicted RBP24.6■■□□□ 1.53
R3HDM4-205ENST00000589445 TNFSF13BQ9Y275 285 aa24.6■■□□□ 1.53
R3HDM4-205ENST00000589445 NLRC5Q86WI3 1866 aa24.6■■□□□ 1.53
R3HDM4-205ENST00000589445 UBE4BO95155 1302 aa24.6■■□□□ 1.53
R3HDM4-205ENST00000589445 COL4A6Q14031 1691 aa24.59■■□□□ 1.53
R3HDM4-205ENST00000589445 A0A0U1RQF3 1178 aa24.59■■□□□ 1.53
R3HDM4-205ENST00000589445 EIF3DO15371 548 aaKnown RBP eCLIP24.59■■□□□ 1.53
R3HDM4-205ENST00000589445 FGFR1P11362 822 aa24.59■■□□□ 1.53
R3HDM4-205ENST00000589445 KCNA1Q09470 495 aa24.59■■□□□ 1.53
R3HDM4-205ENST00000589445 NOLC1Q14978 699 aaKnown RBP eCLIP24.59■■□□□ 1.53
R3HDM4-205ENST00000589445 MPZL3Q6UWV2 235 aa24.59■■□□□ 1.53
R3HDM4-205ENST00000589445 ZPBP2Q6X784 338 aa24.59■■□□□ 1.53
R3HDM4-205ENST00000589445 NELFCDQ8IXH7 590 aa24.59■■□□□ 1.53
R3HDM4-205ENST00000589445 HACE1Q8IYU2 909 aa24.59■■□□□ 1.53
R3HDM4-205ENST00000589445 KIAA0895Q8NCT3 520 aa24.59■■□□□ 1.53
R3HDM4-205ENST00000589445 PHOSPHO2Q8TCD6 241 aa24.59■■□□□ 1.53
R3HDM4-205ENST00000589445 CDT1Q9H211 546 aa24.59■■□□□ 1.53
R3HDM4-205ENST00000589445 IKZF4Q9H2S9 585 aa24.59■■□□□ 1.53
R3HDM4-205ENST00000589445 TMEM161AQ9NX61 479 aa24.59■■□□□ 1.53
R3HDM4-205ENST00000589445 HES2Q9Y543 173 aa24.59■■□□□ 1.53
R3HDM4-205ENST00000589445 IPPQ9Y573 584 aa24.59■■□□□ 1.53
R3HDM4-205ENST00000589445 CITO14578 2027 aa24.59■■□□□ 1.53
R3HDM4-205ENST00000589445 TDRD15B5MCY1 1934 aaKnown RBP24.59■■□□□ 1.53
R3HDM4-205ENST00000589445 ZMYM2Q9UBW7 1377 aa24.58■■□□□ 1.53
R3HDM4-205ENST00000589445 TLL1O43897 1013 aa24.58■■□□□ 1.53
R3HDM4-205ENST00000589445 TOM1L1O75674 476 aa24.58■■□□□ 1.53
R3HDM4-205ENST00000589445 RHOBTB3O94955 611 aa24.58■■□□□ 1.53
R3HDM4-205ENST00000589445 GJB5O95377 273 aa24.58■■□□□ 1.53
R3HDM4-205ENST00000589445 ATF7P17544 494 aaPredicted RBP24.58■■□□□ 1.53
R3HDM4-205ENST00000589445 GATMP50440 423 aa24.58■■□□□ 1.53
R3HDM4-205ENST00000589445 KCNB1Q14721 858 aa24.58■■□□□ 1.53
R3HDM4-205ENST00000589445 PAN2Q504Q3 1202 aaKnown RBP24.58■■□□□ 1.53
R3HDM4-205ENST00000589445 ABI1Q8IZP0 508 aa24.58■■□□□ 1.53
R3HDM4-205ENST00000589445 TOP1MTQ969P6 601 aa24.58■■□□□ 1.53
R3HDM4-205ENST00000589445 GDAQ9Y2T3 454 aa24.58■■□□□ 1.53
R3HDM4-205ENST00000589445 PCDHA5Q9Y5H7 936 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms