RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 PTPN21Q16825 1174 aa24.31■■□□□ 1.48
ATG4D-209ENST00000588857 IFNLR1Q8IU57 520 aaPredicted RBP24.31■■□□□ 1.48
ATG4D-209ENST00000588857 ARRDC4Q8NCT1 418 aa24.31■■□□□ 1.48
ATG4D-209ENST00000588857 TSEN34Q9BSV6 310 aaKnown RBP24.31■■□□□ 1.48
ATG4D-209ENST00000588857 IFT122Q9HBG6 1241 aa24.31■■□□□ 1.48
ATG4D-209ENST00000588857 MOXD2PA6NHM9 499 aa24.3■■□□□ 1.48
ATG4D-209ENST00000588857 MATR3P43243 847 aaKnown RBP eCLIP24.3■■□□□ 1.48
ATG4D-209ENST00000588857 MBTD1Q05BQ5 628 aa24.3■■□□□ 1.48
ATG4D-209ENST00000588857 RDH13Q8NBN7 331 aa24.3■■□□□ 1.48
ATG4D-209ENST00000588857 FZD8Q9H461 694 aa24.3■■□□□ 1.48
ATG4D-209ENST00000588857 PRMT7Q9NVM4 692 aaPredicted RBP24.3■■□□□ 1.48
ATG4D-209ENST00000588857 USP20Q9Y2K6 914 aa24.3■■□□□ 1.48
ATG4D-209ENST00000588857 ACKR2O00590 384 aa24.29■■□□□ 1.48
ATG4D-209ENST00000588857 KIAA0391O15091 583 aaKnown RBP24.29■■□□□ 1.48
ATG4D-209ENST00000588857 PRPF4BQ13523 1007 aaKnown RBP24.29■■□□□ 1.48
ATG4D-209ENST00000588857 HSP90AA2PQ14568 343 aaPredicted RBP24.29■■□□□ 1.48
ATG4D-209ENST00000588857 TAF2Q6P1X5 1199 aa24.29■■□□□ 1.48
ATG4D-209ENST00000588857 DNAJB3Q8WWF6 145 aa24.29■■□□□ 1.48
ATG4D-209ENST00000588857 STYXL1Q9Y6J8 313 aa24.29■■□□□ 1.48
ATG4D-209ENST00000588857 MAPK13O15264 365 aa24.29■■□□□ 1.48
ATG4D-209ENST00000588857 KRT13P13646 458 aa24.29■■□□□ 1.48
ATG4D-209ENST00000588857 PBX1P40424 430 aa24.29■■□□□ 1.48
ATG4D-209ENST00000588857 TMEM62Q0P6H9 643 aa24.29■■□□□ 1.48
ATG4D-209ENST00000588857 TMEM132AQ24JP5 1023 aa24.29■■□□□ 1.48
ATG4D-209ENST00000588857 KIZQ2M2Z5 673 aa24.29■■□□□ 1.48
ATG4D-209ENST00000588857 DCAF17Q5H9S7 520 aaPredicted RBP24.29■■□□□ 1.48
ATG4D-209ENST00000588857 TCERG1LQ5VWI1 586 aa24.29■■□□□ 1.48
ATG4D-209ENST00000588857 SRGAP1Q7Z6B7 1085 aa24.29■■□□□ 1.48
ATG4D-209ENST00000588857 SESTD1Q86VW0 696 aa24.29■■□□□ 1.48
ATG4D-209ENST00000588857 ZNF710Q8N1W2 664 aa24.29■■□□□ 1.48
ATG4D-209ENST00000588857 NME8Q8N427 588 aa24.29■■□□□ 1.48
ATG4D-209ENST00000588857 BORCS6Q96GS4 357 aa24.29■■□□□ 1.48
ATG4D-209ENST00000588857 GLT1D1Q96MS3 346 aa24.29■■□□□ 1.48
ATG4D-209ENST00000588857 MINDY3Q9H8M7 445 aa24.29■■□□□ 1.48
ATG4D-209ENST00000588857 ANKFY1Q9P2R3 1169 aa24.29■■□□□ 1.48
ATG4D-209ENST00000588857 A0A1W2PQC6 194 aa24.28■■□□□ 1.48
ATG4D-209ENST00000588857 GOLGA8IPA6NC78 632 aa24.28■■□□□ 1.48
ATG4D-209ENST00000588857 GOLGA8JA6NMD2 632 aa24.28■■□□□ 1.48
ATG4D-209ENST00000588857 GDF6Q6KF10 455 aaPredicted RBP24.28■■□□□ 1.48
ATG4D-209ENST00000588857 INTS8Q75QN2 995 aaKnown RBP24.28■■□□□ 1.48
ATG4D-209ENST00000588857 CCDC186Q7Z3E2 898 aa24.28■■□□□ 1.48
ATG4D-209ENST00000588857 UBE2Q1Q7Z7E8 422 aa24.28■■□□□ 1.48
ATG4D-209ENST00000588857 SAAL1Q96ER3 474 aa24.28■■□□□ 1.48
ATG4D-209ENST00000588857 ACO2Q99798 780 aaKnown RBP24.28■■□□□ 1.48
ATG4D-209ENST00000588857 TCHPQ9BT92 498 aa24.28■■□□□ 1.48
ATG4D-209ENST00000588857 GCOM2Q9BZD3 368 aaPredicted RBP24.28■■□□□ 1.48
ATG4D-209ENST00000588857 ADAMTS10Q9H324 1103 aa24.28■■□□□ 1.48
ATG4D-209ENST00000588857 KIAA1586Q9HCI6 787 aa24.28■■□□□ 1.48
ATG4D-209ENST00000588857 GINS2Q9Y248 185 aa24.28■■□□□ 1.48
ATG4D-209ENST00000588857 TOM1L1O75674 476 aa24.27■■□□□ 1.48
ATG4D-209ENST00000588857 EDN1P05305 212 aa24.27■■□□□ 1.48
ATG4D-209ENST00000588857 KCNH2Q12809 1159 aa24.27■■□□□ 1.48
ATG4D-209ENST00000588857 ITGA7Q13683 1181 aa24.27■■□□□ 1.48
ATG4D-209ENST00000588857 SNRNP35Q16560 246 aaKnown RBP24.27■■□□□ 1.48
ATG4D-209ENST00000588857 FAM187BQ17R55 369 aa24.27■■□□□ 1.48
ATG4D-209ENST00000588857 GPD1LQ8N335 351 aa24.27■■□□□ 1.48
ATG4D-209ENST00000588857 PRIMPOLQ96LW4 560 aa24.27■■□□□ 1.48
ATG4D-209ENST00000588857 MSTO1Q9BUK6 570 aa24.27■■□□□ 1.48
ATG4D-209ENST00000588857 AGO2Q9UKV8 859 aaKnown RBP24.27■■□□□ 1.48
ATG4D-209ENST00000588857 ITIH6Q6UXX5 1313 aa24.27■■□□□ 1.47
ATG4D-209ENST00000588857 KBTBD13C9JR72 458 aa24.26■■□□□ 1.47
ATG4D-209ENST00000588857 CLDN3O15551 220 aa24.26■■□□□ 1.47
ATG4D-209ENST00000588857 GPR32O75388 356 aa24.26■■□□□ 1.47
ATG4D-209ENST00000588857 AFPP02771 609 aaKnown RBP24.26■■□□□ 1.47
ATG4D-209ENST00000588857 GSDMDP57764 484 aa24.26■■□□□ 1.47
ATG4D-209ENST00000588857 TSHZ1Q6ZSZ6 1077 aa24.26■■□□□ 1.47
ATG4D-209ENST00000588857 RSPH3Q86UC2 560 aa24.26■■□□□ 1.47
ATG4D-209ENST00000588857 ZBTB45Q96K62 511 aaPredicted RBP24.26■■□□□ 1.47
ATG4D-209ENST00000588857 FAM213AQ9BRX8 229 aa24.26■■□□□ 1.47
ATG4D-209ENST00000588857 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.26■■□□□ 1.47
ATG4D-209ENST00000588857 TNRC18O15417 2968 aaPredicted RBP24.25■■□□□ 1.47
ATG4D-209ENST00000588857 A0A0B4J269 797 aa24.25■■□□□ 1.47
ATG4D-209ENST00000588857 TTLL13PA6NNM8 815 aa24.25■■□□□ 1.47
ATG4D-209ENST00000588857 EXTL3O43909 919 aa24.25■■□□□ 1.47
ATG4D-209ENST00000588857 CSDE1O75534 798 aaKnown RBP24.25■■□□□ 1.47
ATG4D-209ENST00000588857 LDHAP00338 332 aaKnown RBP24.25■■□□□ 1.47
ATG4D-209ENST00000588857 IQCF3P0C7M6 154 aa24.25■■□□□ 1.47
ATG4D-209ENST00000588857 BFSP1Q12934 665 aa24.25■■□□□ 1.47
ATG4D-209ENST00000588857 ATF7IP2Q5U623 682 aa24.25■■□□□ 1.47
ATG4D-209ENST00000588857 PPFIBP1Q86W92 1011 aa24.25■■□□□ 1.47
ATG4D-209ENST00000588857 ZSWIM2Q8NEG5 633 aa24.25■■□□□ 1.47
ATG4D-209ENST00000588857 SLC35C1Q96A29 364 aa24.25■■□□□ 1.47
ATG4D-209ENST00000588857 FBXL18Q96ME1 805 aa24.25■■□□□ 1.47
ATG4D-209ENST00000588857 PCMTD1Q96MG8 357 aaPredicted RBP24.25■■□□□ 1.47
ATG4D-209ENST00000588857 ERGIC2Q96RQ1 377 aa24.25■■□□□ 1.47
ATG4D-209ENST00000588857 OGDHLQ9ULD0 1010 aa24.25■■□□□ 1.47
ATG4D-209ENST00000588857 GRIN2DO15399 1336 aa24.25■■□□□ 1.47
ATG4D-209ENST00000588857 B4GALT5O43286 388 aa24.25■■□□□ 1.47
ATG4D-209ENST00000588857 ERLIN2O94905 339 aa24.25■■□□□ 1.47
ATG4D-209ENST00000588857 PTPN11Q06124 597 aaPredicted RBP24.25■■□□□ 1.47
ATG4D-209ENST00000588857 SYCP1Q15431 976 aa24.25■■□□□ 1.47
ATG4D-209ENST00000588857 CBWD2Q8IUF1 395 aa24.25■■□□□ 1.47
ATG4D-209ENST00000588857 CNTNAP2Q9UHC6 1331 aa24.24■■□□□ 1.47
ATG4D-209ENST00000588857 ZNF233A6NK53 670 aa24.24■■□□□ 1.47
ATG4D-209ENST00000588857 RPLP2P05387 115 aaKnown RBP24.24■■□□□ 1.47
ATG4D-209ENST00000588857 TPM1P09493 284 aa24.24■■□□□ 1.47
ATG4D-209ENST00000588857 VAMP7P51809 220 aa24.24■■□□□ 1.47
ATG4D-209ENST00000588857 PTGISQ16647 500 aa24.24■■□□□ 1.47
ATG4D-209ENST00000588857 HS1BP3Q53T59 392 aa24.24■■□□□ 1.47
ATG4D-209ENST00000588857 ZBTB33Q86T24 672 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms