RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 HOXA11P31270 313 aaPredicted RBP17.1■□□□□ 0.33
IFT20-216ENST00000588477 NPEPPSP55786 919 aa17.1■□□□□ 0.33
IFT20-216ENST00000588477 PSMC5P62195 406 aa17.1■□□□□ 0.33
IFT20-216ENST00000588477 DCLRE1AQ6PJP8 1040 aa17.1■□□□□ 0.33
IFT20-216ENST00000588477 GET4Q7L5D6 327 aaPredicted RBP17.1■□□□□ 0.33
IFT20-216ENST00000588477 SRGAP1Q7Z6B7 1085 aa17.1■□□□□ 0.33
IFT20-216ENST00000588477 GLYCTKQ8IVS8 523 aa17.1■□□□□ 0.33
IFT20-216ENST00000588477 RNF168Q8IYW5 571 aaPredicted RBP17.1■□□□□ 0.33
IFT20-216ENST00000588477 SMG8Q8ND04 991 aaKnown RBP17.1■□□□□ 0.33
IFT20-216ENST00000588477 SLC26A6Q9BXS9 759 aa17.1■□□□□ 0.33
IFT20-216ENST00000588477 NT5C3AQ9H0P0 336 aa17.1■□□□□ 0.33
IFT20-216ENST00000588477 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.1■□□□□ 0.33
IFT20-216ENST00000588477 OTOGLQ3ZCN5 2332 aa17.1■□□□□ 0.33
IFT20-216ENST00000588477 POTEMA6NI47 508 aa17.09■□□□□ 0.33
IFT20-216ENST00000588477 F8W810 466 aa17.09■□□□□ 0.33
IFT20-216ENST00000588477 GAS2O43903 313 aaKnown RBP17.09■□□□□ 0.33
IFT20-216ENST00000588477 LRRN2O75325 713 aa17.09■□□□□ 0.33
IFT20-216ENST00000588477 EFEMP2O95967 443 aa17.09■□□□□ 0.33
IFT20-216ENST00000588477 GLULP15104 373 aa17.09■□□□□ 0.33
IFT20-216ENST00000588477 NLRP5P59047 1200 aa17.09■□□□□ 0.33
IFT20-216ENST00000588477 DSG1Q02413 1049 aa17.09■□□□□ 0.33
IFT20-216ENST00000588477 NTRK3Q16288 839 aa17.09■□□□□ 0.33
IFT20-216ENST00000588477 POTEGQ6S5H5 508 aa17.09■□□□□ 0.33
IFT20-216ENST00000588477 ZNF579Q8NAF0 562 aaKnown RBP17.09■□□□□ 0.33
IFT20-216ENST00000588477 HDAC7Q8WUI4 952 aa17.09■□□□□ 0.33
IFT20-216ENST00000588477 PRPF31Q8WWY3 499 aaKnown RBP17.09■□□□□ 0.33
IFT20-216ENST00000588477 SLC7A3Q8WY07 619 aa17.09■□□□□ 0.33
IFT20-216ENST00000588477 RNF26Q9BY78 433 aaPredicted RBP17.09■□□□□ 0.33
IFT20-216ENST00000588477 FOXQ1Q9C009 403 aa17.09■□□□□ 0.33
IFT20-216ENST00000588477 PLEKHA4Q9H4M7 779 aa17.09■□□□□ 0.33
IFT20-216ENST00000588477 UBN1Q9NPG3 1134 aa17.09■□□□□ 0.33
IFT20-216ENST00000588477 MIOSQ9NXC5 875 aa17.09■□□□□ 0.33
IFT20-216ENST00000588477 DLL3Q9NYJ7 618 aa17.09■□□□□ 0.33
IFT20-216ENST00000588477 NUMBLQ9Y6R0 609 aa17.09■□□□□ 0.33
IFT20-216ENST00000588477 NID2Q14112 1375 aa17.08■□□□□ 0.32
IFT20-216ENST00000588477 ARL5CA6NH57 179 aa17.08■□□□□ 0.32
IFT20-216ENST00000588477 TGM5O43548 720 aa17.08■□□□□ 0.32
IFT20-216ENST00000588477 IRX6P78412 446 aaPredicted RBP17.08■□□□□ 0.32
IFT20-216ENST00000588477 HTR4Q13639 388 aa17.08■□□□□ 0.32
IFT20-216ENST00000588477 CNNM3Q8NE01 707 aa17.08■□□□□ 0.32
IFT20-216ENST00000588477 PJA1Q8NG27 643 aa17.08■□□□□ 0.32
IFT20-216ENST00000588477 TMEM143Q96AN5 459 aa17.08■□□□□ 0.32
IFT20-216ENST00000588477 B3GALT6Q96L58 329 aa17.08■□□□□ 0.32
IFT20-216ENST00000588477 GAD1Q99259 594 aa17.08■□□□□ 0.32
IFT20-216ENST00000588477 PRKD2Q9BZL6 878 aa17.08■□□□□ 0.32
IFT20-216ENST00000588477 RNF39Q9H2S5 420 aa17.08■□□□□ 0.32
IFT20-216ENST00000588477 SLC2A4RGQ9NR83 387 aa17.08■□□□□ 0.32
IFT20-216ENST00000588477 BMP2KQ9NSY1 1161 aaPredicted RBP17.08■□□□□ 0.32
IFT20-216ENST00000588477 IPPQ9Y573 584 aa17.08■□□□□ 0.32
IFT20-216ENST00000588477 CYP3A7-CYP3A51PA0A087WV96 503 aa17.07■□□□□ 0.32
IFT20-216ENST00000588477 ANHXE9PGG2 379 aa17.07■□□□□ 0.32
IFT20-216ENST00000588477 EML1O00423 815 aa17.07■□□□□ 0.32
IFT20-216ENST00000588477 PAPLNO95428 1278 aa17.07■□□□□ 0.32
IFT20-216ENST00000588477 CYP3A7P24462 503 aa17.07■□□□□ 0.32
IFT20-216ENST00000588477 MLH1P40692 756 aa17.07■□□□□ 0.32
IFT20-216ENST00000588477 SCNN1GP51170 649 aa17.07■□□□□ 0.32
IFT20-216ENST00000588477 STARD6P59095 220 aa17.07■□□□□ 0.32
IFT20-216ENST00000588477 DSC1Q08554 894 aa17.07■□□□□ 0.32
IFT20-216ENST00000588477 LAMTOR4Q0VGL1 99 aa17.07■□□□□ 0.32
IFT20-216ENST00000588477 RSPO4Q2I0M5 234 aaPredicted RBP17.07■□□□□ 0.32
IFT20-216ENST00000588477 SUMF1Q8NBK3 374 aa17.07■□□□□ 0.32
IFT20-216ENST00000588477 ETNPPLQ8TBG4 499 aa17.07■□□□□ 0.32
IFT20-216ENST00000588477 PSPC1Q8WXF1 523 aaKnown RBP17.07■□□□□ 0.32
IFT20-216ENST00000588477 CEP170P1Q96L14 293 aa17.07■□□□□ 0.32
IFT20-216ENST00000588477 ZFP42Q96MM3 310 aa17.07■□□□□ 0.32
IFT20-216ENST00000588477 RPP25Q9BUL9 199 aaKnown RBP17.07■□□□□ 0.32
IFT20-216ENST00000588477 EIF2AQ9BY44 585 aaKnown RBP17.07■□□□□ 0.32
IFT20-216ENST00000588477 C22orf23Q9BZE7 217 aa17.07■□□□□ 0.32
IFT20-216ENST00000588477 SH3GLB2Q9NR46 395 aa17.07■□□□□ 0.32
IFT20-216ENST00000588477 CHST7Q9NS84 486 aa17.07■□□□□ 0.32
IFT20-216ENST00000588477 ZDHHC7Q9NXF8 308 aa17.07■□□□□ 0.32
IFT20-216ENST00000588477 HES2Q9Y543 173 aa17.07■□□□□ 0.32
IFT20-216ENST00000588477 NOTCH4Q99466 2003 aa17.07■□□□□ 0.32
IFT20-216ENST00000588477 CEP250Q9BV73 2442 aa17.07■□□□□ 0.32
IFT20-216ENST00000588477 VWA8A3KMH1 1905 aa17.06■□□□□ 0.32
IFT20-216ENST00000588477 KINO60870 393 aaKnown RBP17.06■□□□□ 0.32
IFT20-216ENST00000588477 NR1I2O75469 434 aa17.06■□□□□ 0.32
IFT20-216ENST00000588477 ERLIN2O94905 339 aa17.06■□□□□ 0.32
IFT20-216ENST00000588477 IFNAR1P17181 557 aa17.06■□□□□ 0.32
IFT20-216ENST00000588477 QARSP47897 775 aaKnown RBP17.06■□□□□ 0.32
IFT20-216ENST00000588477 GPC5P78333 572 aa17.06■□□□□ 0.32
IFT20-216ENST00000588477 LILRA6Q6PI73 481 aa17.06■□□□□ 0.32
IFT20-216ENST00000588477 EXOC8Q8IYI6 725 aa17.06■□□□□ 0.32
IFT20-216ENST00000588477 MAML2Q8IZL2 1156 aaPredicted RBP17.06■□□□□ 0.32
IFT20-216ENST00000588477 RNF149Q8NC42 400 aa17.06■□□□□ 0.32
IFT20-216ENST00000588477 FGF14Q92915 247 aa17.06■□□□□ 0.32
IFT20-216ENST00000588477 SHDQ96IW2 340 aa17.06■□□□□ 0.32
IFT20-216ENST00000588477 CPB2Q96IY4 423 aa17.06■□□□□ 0.32
IFT20-216ENST00000588477 COLEC11Q9BWP8 271 aa17.06■□□□□ 0.32
IFT20-216ENST00000588477 APOL6Q9BWW8 343 aa17.06■□□□□ 0.32
IFT20-216ENST00000588477 GPR62Q9BZJ7 368 aa17.06■□□□□ 0.32
IFT20-216ENST00000588477 SLKQ9H2G2 1235 aaPredicted RBP17.06■□□□□ 0.32
IFT20-216ENST00000588477 DHX33Q9H6R0 707 aaKnown RBP17.06■□□□□ 0.32
IFT20-216ENST00000588477 PCDHA4Q9UN74 947 aa17.06■□□□□ 0.32
IFT20-216ENST00000588477 TRIP11Q15643 1979 aa17.06■□□□□ 0.32
IFT20-216ENST00000588477 C1RP00736 705 aa17.05■□□□□ 0.32
IFT20-216ENST00000588477 RPL17P18621 184 aaKnown RBP17.05■□□□□ 0.32
IFT20-216ENST00000588477 CCT2P78371 535 aaKnown RBP17.05■□□□□ 0.32
IFT20-216ENST00000588477 SNW1Q13573 536 aaKnown RBP17.05■□□□□ 0.32
IFT20-216ENST00000588477 USP41Q3LFD5 358 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms