RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.94□□□□□ -0.82
CIRBP-218ENST00000588344 CARNS1A5YM72 827 aa9.94□□□□□ -0.82
CIRBP-218ENST00000588344 KIAA0391O15091 583 aaKnown RBP9.94□□□□□ -0.82
CIRBP-218ENST00000588344 PPP1R37O75864 691 aa9.94□□□□□ -0.82
CIRBP-218ENST00000588344 MCF2P10911 925 aa9.94□□□□□ -0.82
CIRBP-218ENST00000588344 NMT1P30419 496 aaKnown RBP9.94□□□□□ -0.82
CIRBP-218ENST00000588344 LIG4P49917 911 aa9.94□□□□□ -0.82
CIRBP-218ENST00000588344 POU5F1Q01860 360 aaKnown RBP9.94□□□□□ -0.82
CIRBP-218ENST00000588344 SKOR2Q2VWA4 1001 aaPredicted RBP9.94□□□□□ -0.82
CIRBP-218ENST00000588344 LRIT3Q3SXY7 679 aa9.94□□□□□ -0.82
CIRBP-218ENST00000588344 C9orf50Q5SZB4 431 aa9.94□□□□□ -0.82
CIRBP-218ENST00000588344 NT5DC1Q5TFE4 455 aa9.94□□□□□ -0.82
CIRBP-218ENST00000588344 MPZL3Q6UWV2 235 aa9.94□□□□□ -0.82
CIRBP-218ENST00000588344 ECHDC2Q86YB7 292 aa9.94□□□□□ -0.82
CIRBP-218ENST00000588344 MYOCDQ8IZQ8 938 aa9.94□□□□□ -0.82
CIRBP-218ENST00000588344 SYCP3Q8IZU3 236 aa9.94□□□□□ -0.82
CIRBP-218ENST00000588344 TRIML1Q8N9V2 468 aa9.94□□□□□ -0.82
CIRBP-218ENST00000588344 ZBED2Q9BTP6 218 aa9.94□□□□□ -0.82
CIRBP-218ENST00000588344 PTPRHQ9HD43 1115 aa9.94□□□□□ -0.82
CIRBP-218ENST00000588344 FAM105AQ9NUU6 356 aa9.94□□□□□ -0.82
CIRBP-218ENST00000588344 PCDHB2Q9Y5E7 798 aa9.94□□□□□ -0.82
CIRBP-218ENST00000588344 PCDHA5Q9Y5H7 936 aa9.94□□□□□ -0.82
CIRBP-218ENST00000588344 KAT6AQ92794 2004 aa9.94□□□□□ -0.82
CIRBP-218ENST00000588344 HNRNPDLO14979 420 aaKnown RBP9.93□□□□□ -0.82
CIRBP-218ENST00000588344 MGEA5O60502 916 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 GJB5O95377 273 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 LDHAP00338 332 aaKnown RBP9.93□□□□□ -0.82
CIRBP-218ENST00000588344 PROZP22891 400 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 CASP1P29466 404 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 SMAD3P84022 425 aaKnown RBP9.93□□□□□ -0.82
CIRBP-218ENST00000588344 MCL1Q07820 350 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 PNOCQ13519 176 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 STIM1Q13586 685 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 RAB30Q15771 203 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 BMT2Q1RMZ1 405 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 ZC2HC1CQ53FD0 456 aaPredicted RBP9.93□□□□□ -0.82
CIRBP-218ENST00000588344 COBLL1Q53SF7 1204 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 ZNF658Q5TYW1 1059 aaPredicted RBP9.93□□□□□ -0.82
CIRBP-218ENST00000588344 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.93□□□□□ -0.822e-8■□□□□ 8.6
CIRBP-218ENST00000588344 EPM2AIP1Q7L775 607 aaPredicted RBP9.93□□□□□ -0.82
CIRBP-218ENST00000588344 HS2ST1Q7LGA3 356 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 TAS1R3Q7RTX0 852 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 HERC6Q8IVU3 1022 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 ABI1Q8IZP0 508 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 CRIPAKQ8N1N5 446 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 TMEM174Q8WUU8 243 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 SYAP1Q96A49 352 aaPredicted RBP9.93□□□□□ -0.82
CIRBP-218ENST00000588344 CPB2Q96IY4 423 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 TSPAN18Q96SJ8 248 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 TARS2Q9BW92 718 aaKnown RBP9.93□□□□□ -0.82
CIRBP-218ENST00000588344 GBP3Q9H0R5 595 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 CLSTN2Q9H4D0 955 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 PDZD7Q9H5P4 517 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 SLC39A2Q9NP94 309 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 TBC1D7Q9P0N9 293 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 CXXC1Q9P0U4 656 aaPredicted RBP9.93□□□□□ -0.82
CIRBP-218ENST00000588344 KIAA1468Q9P260 1216 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 KANSL3Q9P2N6 904 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 MSRAQ9UJ68 235 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 COLQQ9Y215 455 aaPredicted RBP9.93□□□□□ -0.82
CIRBP-218ENST00000588344 GIT1Q9Y2X7 761 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 PCDHA11Q9Y5I1 949 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.93□□□□□ -0.82
CIRBP-218ENST00000588344 STYXL1Q9Y6J8 313 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 MYH15Q9Y2K3 1946 aa9.93□□□□□ -0.82
CIRBP-218ENST00000588344 ZMYM2Q9UBW7 1377 aa9.92□□□□□ -0.82
CIRBP-218ENST00000588344 A0A0B4J269 797 aa9.92□□□□□ -0.82
CIRBP-218ENST00000588344 B4GALT5O43286 388 aa9.92□□□□□ -0.82
CIRBP-218ENST00000588344 TLL1O43897 1013 aa9.92□□□□□ -0.82
CIRBP-218ENST00000588344 DGKIO75912 1065 aa9.92□□□□□ -0.82
CIRBP-218ENST00000588344 LETM1O95202 739 aaPredicted RBP9.92□□□□□ -0.82
CIRBP-218ENST00000588344 PRR29P0C7W0 189 aa9.92□□□□□ -0.82
CIRBP-218ENST00000588344 MYBP10242 640 aa9.92□□□□□ -0.82
CIRBP-218ENST00000588344 ITGA4P13612 1032 aa9.92□□□□□ -0.82
CIRBP-218ENST00000588344 GARTP22102 1010 aa9.92□□□□□ -0.82
CIRBP-218ENST00000588344 MATR3P43243 847 aaKnown RBP eCLIP9.92□□□□□ -0.82
CIRBP-218ENST00000588344 STK4Q13043 487 aa9.92□□□□□ -0.82
CIRBP-218ENST00000588344 MYBPC2Q14324 1141 aa9.92□□□□□ -0.82
CIRBP-218ENST00000588344 NOLC1Q14978 699 aaKnown RBP eCLIP9.92□□□□□ -0.82
CIRBP-218ENST00000588344 KNOP1Q1ED39 458 aaKnown RBP9.92□□□□□ -0.82
CIRBP-218ENST00000588344 TCTN1Q2MV58 587 aa9.92□□□□□ -0.82
CIRBP-218ENST00000588344 ZNF568Q3ZCX4 644 aa9.92□□□□□ -0.82
CIRBP-218ENST00000588344 UBXN11Q5T124 520 aa9.92□□□□□ -0.82
CIRBP-218ENST00000588344 GLB1LQ6UWU2 654 aa9.92□□□□□ -0.82
CIRBP-218ENST00000588344 ZNF598Q86UK7 904 aaKnown RBP9.92□□□□□ -0.82
CIRBP-218ENST00000588344 GUF1Q8N442 669 aaKnown RBP9.92□□□□□ -0.82
CIRBP-218ENST00000588344 SCFD1Q8WVM8 642 aa9.92□□□□□ -0.82
CIRBP-218ENST00000588344 LINC01599Q8WXQ3 324 aa9.92□□□□□ -0.82
CIRBP-218ENST00000588344 CCDC94Q9BW85 323 aaPredicted RBP9.92□□□□□ -0.82
CIRBP-218ENST00000588344 NUP62CLQ9H1M0 184 aa9.92□□□□□ -0.82
CIRBP-218ENST00000588344 PLEKHA5Q9HAU0 1116 aa9.92□□□□□ -0.82
CIRBP-218ENST00000588344 KIAA1586Q9HCI6 787 aa9.92□□□□□ -0.82
CIRBP-218ENST00000588344 TOPORSQ9NS56 1045 aaPredicted RBP9.92□□□□□ -0.82
CIRBP-218ENST00000588344 IPPQ9Y573 584 aa9.92□□□□□ -0.82
CIRBP-218ENST00000588344 PDXKO00764 312 aa9.91□□□□□ -0.82
CIRBP-218ENST00000588344 OGTO15294 1046 aa9.91□□□□□ -0.82
CIRBP-218ENST00000588344 PRPF6O94906 941 aaKnown RBP9.91□□□□□ -0.82
CIRBP-218ENST00000588344 UPP2O95045 317 aa9.91□□□□□ -0.82
CIRBP-218ENST00000588344 NPTXRO95502 500 aa9.91□□□□□ -0.82
CIRBP-218ENST00000588344 GRM5P41594 1212 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms