RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 LARGE1O95461 756 aa17.72■□□□□ 0.43
ERCC1-206ENST00000588300 SSBP05455 408 aaKnown RBP eCLIP17.72■□□□□ 0.43
ERCC1-206ENST00000588300 KLRC2P26717 231 aa17.72■□□□□ 0.43
ERCC1-206ENST00000588300 POU5F1BQ06416 359 aa17.72■□□□□ 0.43
ERCC1-206ENST00000588300 KANK3Q6NY19 840 aa17.72■□□□□ 0.43
ERCC1-206ENST00000588300 IFNLR1Q8IU57 520 aaPredicted RBP17.72■□□□□ 0.43
ERCC1-206ENST00000588300 PLCD3Q8N3E9 789 aa17.72■□□□□ 0.43
ERCC1-206ENST00000588300 NSUN7Q8NE18 718 aaKnown RBP17.72■□□□□ 0.43
ERCC1-206ENST00000588300 KLHL5Q96PQ7 755 aa17.72■□□□□ 0.43
ERCC1-206ENST00000588300 HSD17B14Q9BPX1 270 aa17.72■□□□□ 0.43
ERCC1-206ENST00000588300 TTC12Q9H892 705 aaPredicted RBP17.72■□□□□ 0.43
ERCC1-206ENST00000588300 MRPL17Q9NRX2 175 aaKnown RBP17.72■□□□□ 0.43
ERCC1-206ENST00000588300 USTQ9Y2C2 406 aa17.72■□□□□ 0.43
ERCC1-206ENST00000588300 BTBD18B2RXH4 712 aa17.71■□□□□ 0.43
ERCC1-206ENST00000588300 INPPL1O15357 1258 aa17.71■□□□□ 0.43
ERCC1-206ENST00000588300 NEMFO60524 1076 aa17.71■□□□□ 0.43
ERCC1-206ENST00000588300 SOD2P04179 222 aa17.71■□□□□ 0.43
ERCC1-206ENST00000588300 URODP06132 367 aa17.71■□□□□ 0.43
ERCC1-206ENST00000588300 CNPP09543 421 aaKnown RBP17.71■□□□□ 0.43
ERCC1-206ENST00000588300 AVPR2P30518 371 aa17.71■□□□□ 0.43
ERCC1-206ENST00000588300 CLCN4P51793 760 aa17.71■□□□□ 0.43
ERCC1-206ENST00000588300 VCPP55072 806 aaKnown RBP17.71■□□□□ 0.43
ERCC1-206ENST00000588300 TRIM29Q14134 588 aa17.71■□□□□ 0.43
ERCC1-206ENST00000588300 TMC5Q6UXY8 1006 aa17.71■□□□□ 0.43
ERCC1-206ENST00000588300 DIS3L2Q8IYB7 885 aaKnown RBP17.71■□□□□ 0.43
ERCC1-206ENST00000588300 ZDHHC14Q8IZN3 488 aa17.71■□□□□ 0.43
ERCC1-206ENST00000588300 CPB2Q96IY4 423 aa17.71■□□□□ 0.43
ERCC1-206ENST00000588300 EIF2AQ9BY44 585 aaKnown RBP17.71■□□□□ 0.43
ERCC1-206ENST00000588300 CSRNP2Q9H175 543 aa17.71■□□□□ 0.43
ERCC1-206ENST00000588300 SSX2IPQ9Y2D8 614 aa17.71■□□□□ 0.43
ERCC1-206ENST00000588300 PRG3Q9Y2Y8 225 aaPredicted RBP17.71■□□□□ 0.43
ERCC1-206ENST00000588300 MYO10Q9HD67 2058 aa17.71■□□□□ 0.43
ERCC1-206ENST00000588300 ARL5CA6NH57 179 aa17.7■□□□□ 0.42
ERCC1-206ENST00000588300 LILRB3O75022 631 aa17.7■□□□□ 0.42
ERCC1-206ENST00000588300 BRD1O95696 1058 aa17.7■□□□□ 0.42
ERCC1-206ENST00000588300 ARL2P36404 184 aa17.7■□□□□ 0.42
ERCC1-206ENST00000588300 MLH1P40692 756 aa17.7■□□□□ 0.42
ERCC1-206ENST00000588300 TXKP42681 527 aa17.7■□□□□ 0.42
ERCC1-206ENST00000588300 OR1G1P47890 313 aa17.7■□□□□ 0.42
ERCC1-206ENST00000588300 RARRES1P49788 294 aa17.7■□□□□ 0.42
ERCC1-206ENST00000588300 MBTD1Q05BQ5 628 aa17.7■□□□□ 0.42
ERCC1-206ENST00000588300 TCF15Q12870 199 aa17.7■□□□□ 0.42
ERCC1-206ENST00000588300 CAPSQ13938 189 aa17.7■□□□□ 0.42
ERCC1-206ENST00000588300 GPR149Q86SP6 731 aa17.7■□□□□ 0.42
ERCC1-206ENST00000588300 COLGALT2Q8IYK4 626 aa17.7■□□□□ 0.42
ERCC1-206ENST00000588300 HACE1Q8IYU2 909 aa17.7■□□□□ 0.42
ERCC1-206ENST00000588300 ASAP3Q8TDY4 903 aa17.7■□□□□ 0.42
ERCC1-206ENST00000588300 GAD1Q99259 594 aa17.7■□□□□ 0.42
ERCC1-206ENST00000588300 HERC2P3Q9BVR0 1158 aa17.7■□□□□ 0.42
ERCC1-206ENST00000588300 NFKBIZQ9BYH8 718 aa17.7■□□□□ 0.42
ERCC1-206ENST00000588300 TRIM6Q9C030 488 aaPredicted RBP17.7■□□□□ 0.42
ERCC1-206ENST00000588300 MARCH5Q9NX47 278 aa17.7■□□□□ 0.42
ERCC1-206ENST00000588300 C2orf16Q68DN1 1984 aa17.7■□□□□ 0.42
ERCC1-206ENST00000588300 NR1I2O75469 434 aa17.69■□□□□ 0.42
ERCC1-206ENST00000588300 PDGFBP01127 241 aaPredicted RBP17.69■□□□□ 0.42
ERCC1-206ENST00000588300 SCNN1GP51170 649 aa17.69■□□□□ 0.42
ERCC1-206ENST00000588300 FOSBP53539 338 aa17.69■□□□□ 0.42
ERCC1-206ENST00000588300 AMHR2Q16671 573 aa17.69■□□□□ 0.42
ERCC1-206ENST00000588300 CCDC149Q6ZUS6 474 aa17.69■□□□□ 0.42
ERCC1-206ENST00000588300 ACSF2Q96CM8 615 aaPredicted RBP17.69■□□□□ 0.42
ERCC1-206ENST00000588300 APOL6Q9BWW8 343 aa17.69■□□□□ 0.42
ERCC1-206ENST00000588300 RNF39Q9H2S5 420 aa17.69■□□□□ 0.42
ERCC1-206ENST00000588300 LIMD1Q9UGP4 676 aa17.69■□□□□ 0.42
ERCC1-206ENST00000588300 GIT1Q9Y2X7 761 aa17.69■□□□□ 0.42
ERCC1-206ENST00000588300 HES2Q9Y543 173 aa17.69■□□□□ 0.42
ERCC1-206ENST00000588300 WNT7AO00755 349 aa17.68■□□□□ 0.42
ERCC1-206ENST00000588300 C2CD2LO14523 706 aa17.68■□□□□ 0.42
ERCC1-206ENST00000588300 JAK2O60674 1132 aa17.68■□□□□ 0.42
ERCC1-206ENST00000588300 EIF5BO60841 1220 aaKnown RBP17.68■□□□□ 0.42
ERCC1-206ENST00000588300 ASGR2P07307 311 aa17.68■□□□□ 0.42
ERCC1-206ENST00000588300 ADH1AP07327 375 aa17.68■□□□□ 0.42
ERCC1-206ENST00000588300 ARF4P18085 180 aaPredicted RBP17.68■□□□□ 0.42
ERCC1-206ENST00000588300 GLRA2P23416 452 aa17.68■□□□□ 0.42
ERCC1-206ENST00000588300 GLUD2P49448 558 aa17.68■□□□□ 0.42
ERCC1-206ENST00000588300 PLXNA3P51805 1871 aa17.68■□□□□ 0.42
ERCC1-206ENST00000588300 NEK4P51957 841 aa17.68■□□□□ 0.42
ERCC1-206ENST00000588300 DSC1Q08554 894 aa17.68■□□□□ 0.42
ERCC1-206ENST00000588300 ELMSAN1Q6PJG2 1045 aa17.68■□□□□ 0.42
ERCC1-206ENST00000588300 OTOP3Q7RTS5 596 aa17.68■□□□□ 0.42
ERCC1-206ENST00000588300 PIGOQ8TEQ8 1089 aa17.68■□□□□ 0.42
ERCC1-206ENST00000588300 ZFP42Q96MM3 310 aa17.68■□□□□ 0.42
ERCC1-206ENST00000588300 MTMR9Q96QG7 549 aa17.68■□□□□ 0.42
ERCC1-206ENST00000588300 RPS6KC1Q96S38 1066 aa17.68■□□□□ 0.42
ERCC1-206ENST00000588300 PHOX2BQ99453 314 aa17.68■□□□□ 0.42
ERCC1-206ENST00000588300 IRF2BPLQ9H1B7 796 aa17.68■□□□□ 0.42
ERCC1-206ENST00000588300 POLR3FQ9H1D9 316 aaPredicted RBP17.68■□□□□ 0.42
ERCC1-206ENST00000588300 POTEMA6NI47 508 aa17.67■□□□□ 0.42
ERCC1-206ENST00000588300 USO1O60763 962 aaKnown RBP17.67■□□□□ 0.42
ERCC1-206ENST00000588300 XRCC6P12956 609 aaKnown RBP eCLIP17.67■□□□□ 0.42
ERCC1-206ENST00000588300 NUBP1P53384 320 aa17.67■□□□□ 0.42
ERCC1-206ENST00000588300 SLC27A1Q6PCB7 646 aa17.67■□□□□ 0.42
ERCC1-206ENST00000588300 C15orf39Q6ZRI6 1047 aa17.67■□□□□ 0.42
ERCC1-206ENST00000588300 RNF168Q8IYW5 571 aaPredicted RBP17.67■□□□□ 0.42
ERCC1-206ENST00000588300 NXF3Q9H4D5 531 aaKnown RBP17.67■□□□□ 0.42
ERCC1-206ENST00000588300 MAN1C1Q9NR34 630 aa17.67■□□□□ 0.42
ERCC1-206ENST00000588300 MIOSQ9NXC5 875 aa17.67■□□□□ 0.42
ERCC1-206ENST00000588300 PPP4R2Q9NY27 417 aa17.67■□□□□ 0.42
ERCC1-206ENST00000588300 DPP7Q9UHL4 492 aa17.67■□□□□ 0.42
ERCC1-206ENST00000588300 ZMYM2Q9UBW7 1377 aa17.66■□□□□ 0.42
ERCC1-206ENST00000588300 B4GALT5O43286 388 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms