RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 SGMS1Q86VZ5 419 aa9.6□□□□□ -0.87
SDF2-204ENST00000587338 REXO1Q8N1G1 1221 aaKnown RBP9.6□□□□□ -0.87
SDF2-204ENST00000587338 FGF14Q92915 247 aa9.6□□□□□ -0.87
SDF2-204ENST00000587338 CHAMP1Q96JM3 812 aa9.6□□□□□ -0.87
SDF2-204ENST00000587338 RTKNQ9BST9 563 aa9.6□□□□□ -0.87
SDF2-204ENST00000587338 RPP25Q9BUL9 199 aaKnown RBP9.6□□□□□ -0.87
SDF2-204ENST00000587338 PRKD2Q9BZL6 878 aa9.6□□□□□ -0.87
SDF2-204ENST00000587338 NT5C3AQ9H0P0 336 aa9.6□□□□□ -0.87
SDF2-204ENST00000587338 EPC1Q9H2F5 836 aa9.6□□□□□ -0.87
SDF2-204ENST00000587338 AGPAT5Q9NUQ2 364 aa9.6□□□□□ -0.87
SDF2-204ENST00000587338 MARCH5Q9NX47 278 aa9.6□□□□□ -0.87
SDF2-204ENST00000587338 ZDHHC7Q9NXF8 308 aa9.6□□□□□ -0.87
SDF2-204ENST00000587338 KANSL3Q9P2N6 904 aa9.6□□□□□ -0.87
SDF2-204ENST00000587338 SUCLA2Q9P2R7 463 aaPredicted RBP9.6□□□□□ -0.87
SDF2-204ENST00000587338 MTF2Q9Y483 593 aaPredicted RBP9.6□□□□□ -0.87
SDF2-204ENST00000587338 RBM19Q9Y4C8 960 aaKnown RBP9.6□□□□□ -0.87
SDF2-204ENST00000587338 CNOT1A5YKK6 2376 aaKnown RBP9.6□□□□□ -0.87
SDF2-204ENST00000587338 COL4A3Q01955 1670 aa9.6□□□□□ -0.87
SDF2-204ENST00000587338 MIA3Q5JRA6 1907 aa9.6□□□□□ -0.87
SDF2-204ENST00000587338 FAM170BA6NMN3 283 aa9.59□□□□□ -0.87
SDF2-204ENST00000587338 F8W810 466 aa9.59□□□□□ -0.87
SDF2-204ENST00000587338 SLC27A2O14975 620 aa9.59□□□□□ -0.87
SDF2-204ENST00000587338 ADAMTS3O15072 1205 aa9.59□□□□□ -0.87
SDF2-204ENST00000587338 ZBTB43O43298 467 aa9.59□□□□□ -0.87
SDF2-204ENST00000587338 TGM5O43548 720 aa9.59□□□□□ -0.87
SDF2-204ENST00000587338 GAS2O43903 313 aaKnown RBP9.59□□□□□ -0.87
SDF2-204ENST00000587338 ADRB1P08588 477 aa9.59□□□□□ -0.87
SDF2-204ENST00000587338 CD72P21854 359 aa9.59□□□□□ -0.87
SDF2-204ENST00000587338 FSHRP23945 695 aa9.59□□□□□ -0.87
SDF2-204ENST00000587338 JAK3P52333 1124 aa9.59□□□□□ -0.87
SDF2-204ENST00000587338 PARM1Q6UWI2 310 aa9.59□□□□□ -0.87
SDF2-204ENST00000587338 KSR1Q8IVT5 923 aa9.59□□□□□ -0.87
SDF2-204ENST00000587338 LENG9Q96B70 501 aa9.59□□□□□ -0.87
SDF2-204ENST00000587338 B3GALT6Q96L58 329 aa9.59□□□□□ -0.87
SDF2-204ENST00000587338 ESYT1Q9BSJ8 1104 aa9.59□□□□□ -0.87
SDF2-204ENST00000587338 TEKT3Q9BXF9 490 aa9.59□□□□□ -0.87
SDF2-204ENST00000587338 UNC45AQ9H3U1 944 aa9.59□□□□□ -0.87
SDF2-204ENST00000587338 PLEKHA4Q9H4M7 779 aa9.59□□□□□ -0.87
SDF2-204ENST00000587338 RXFP1Q9HBX9 757 aa9.59□□□□□ -0.87
SDF2-204ENST00000587338 ZSCAN32Q9NX65 697 aa9.59□□□□□ -0.87
SDF2-204ENST00000587338 GMEB2Q9UKD1 530 aa9.59□□□□□ -0.87
SDF2-204ENST00000587338 ZFYVE26Q68DK2 2539 aa9.59□□□□□ -0.87
SDF2-204ENST00000587338 ZZEF1O43149 2961 aa9.59□□□□□ -0.87
SDF2-204ENST00000587338 IGKV6-21A0A0C4DH24 114 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 GOLGA8AA7E2F4 631 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 GOLGA8BA8MQT2 603 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 MSH4O15457 936 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 REC8O95072 547 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 RPL17P18621 184 aaKnown RBP9.58□□□□□ -0.88
SDF2-204ENST00000587338 KCNA4P22459 653 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 SFNP31947 248 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 CIITAP33076 1130 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 NTHL1P78549 312 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 DSG1Q02413 1049 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 PRKCQQ04759 706 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 SLC44A4Q53GD3 710 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 XKR3Q5GH77 459 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 PPM1JQ5JR12 505 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 LRCH2Q5VUJ6 765 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 CREB3L3Q68CJ9 461 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 TSSK4Q6SA08 328 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 GRASPQ7Z6J2 395 aaPredicted RBP9.58□□□□□ -0.88
SDF2-204ENST00000587338 MRPL10Q7Z7H8 261 aaKnown RBP9.58□□□□□ -0.88
SDF2-204ENST00000587338 COLGALT2Q8IYK4 626 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 RNF168Q8IYW5 571 aaPredicted RBP9.58□□□□□ -0.88
SDF2-204ENST00000587338 ZBTB44Q8NCP5 570 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 HDAC7Q8WUI4 952 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 GJA10Q969M2 543 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 BORCS6Q96GS4 357 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 TCEANC2Q96MN5 208 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 NIFKQ9BYG3 293 aaKnown RBP9.58□□□□□ -0.88
SDF2-204ENST00000587338 C6orf50Q9HD87 102 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 PARD6AQ9NPB6 346 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 LTB4R2Q9NPC1 389 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 ANO2Q9NQ90 1003 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 CDH7Q9ULB5 785 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 BRPF3Q9ULD4 1205 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 NAP1L2Q9ULW6 460 aaPredicted RBP9.58□□□□□ -0.88
SDF2-204ENST00000587338 ZFP37Q9Y6Q3 630 aaPredicted RBP9.58□□□□□ -0.88
SDF2-204ENST00000587338 WDR81Q562E7 1941 aa9.58□□□□□ -0.88
SDF2-204ENST00000587338 PATJQ8NI35 1801 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 MYH15Q9Y2K3 1946 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 ESYT2A0FGR8 921 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 ARL5CA6NH57 179 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 DDX11L8A8MPP1 907 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 LILRB5O75023 590 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 ABCB7O75027 752 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 ZMYND10O75800 440 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 PAPLNO95428 1278 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 ITGA4P13612 1032 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 MLH1P40692 756 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 MAGEA9P43362 315 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 SCNN1GP51170 649 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 LPAL2Q16609 132 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 PFKFB3Q16875 520 aaPredicted RBP9.57□□□□□ -0.88
SDF2-204ENST00000587338 ZBTB41Q5SVQ8 909 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 UBXN11Q5T124 520 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 PLA2G4FQ68DD2 849 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 TPRG1Q6ZUI0 275 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 MTSS1LQ765P7 747 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms