RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 C2orf71A6NGG8 1288 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 MEIS3P2A8K0S8 358 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 IPO5O00410 1097 aaKnown RBP8.7□□□□□ -1.02
VMP1-204ENST00000587259 ARHGAP33O14559 1287 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 GPR182O15218 404 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 MAFGO15525 162 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 CLASP2O75122 1294 aaKnown RBP8.7□□□□□ -1.02
VMP1-204ENST00000587259 ZNF202O95125 648 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 MYBP10242 640 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 EPCAMP16422 314 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 LAG3P18627 525 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 LONP1P36776 959 aaKnown RBP8.7□□□□□ -1.02
VMP1-204ENST00000587259 SREBF1P36956 1147 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 PRPHP41219 470 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 CLK2P49760 499 aaKnown RBP8.7□□□□□ -1.02
VMP1-204ENST00000587259 TOB1P50616 345 aaPredicted RBP8.7□□□□□ -1.02
VMP1-204ENST00000587259 NDUFA8P51970 172 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 CRYBB1P53674 252 aaPredicted RBP8.7□□□□□ -1.02
VMP1-204ENST00000587259 FAM189BP81408 668 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 UBE3AQ05086 875 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 TYRO3Q06418 890 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 DRP2Q13474 957 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 NONOQ15233 471 aaKnown RBP eCLIP8.7□□□□□ -1.02
VMP1-204ENST00000587259 NPY5RQ15761 445 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 EFCAB12Q6NXP0 572 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 MIS18BP1Q6P0N0 1132 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 PIK3AP1Q6ZUJ8 805 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 ECHDC2Q86YB7 292 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 CEP57L1Q8IYX8 460 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 BCL7CQ8WUZ0 217 aaPredicted RBP8.7□□□□□ -1.02
VMP1-204ENST00000587259 LPPQ93052 612 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 TRIM44Q96DX7 344 aaPredicted RBP8.7□□□□□ -1.02
VMP1-204ENST00000587259 RIPOR3Q96MK2 946 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 ZNF558Q96NG5 402 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 CDCA3Q99618 268 aaPredicted RBP8.7□□□□□ -1.02
VMP1-204ENST00000587259 RAB34Q9BZG1 259 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 ADAMTS10Q9H324 1103 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 C1orf112Q9NSG2 853 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 GABBR1Q9UBS5 961 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 LIMD1Q9UGP4 676 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 FBXO2Q9UK22 296 aaPredicted RBP8.7□□□□□ -1.02
VMP1-204ENST00000587259 HPSEQ9Y251 543 aa8.7□□□□□ -1.02
VMP1-204ENST00000587259 PTPRZ1P23471 2315 aaPredicted RBP8.69□□□□□ -1.02
VMP1-204ENST00000587259 DMDP11532 3685 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 VPS13AQ96RL7 3174 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 A0A1B0GVL5 298 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 M0R2N6 131 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 CHMP2AO43633 222 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 ZNF862O60290 1169 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 B4GALT3O60512 393 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 GCFC2P16383 781 aaKnown RBP8.69□□□□□ -1.02
VMP1-204ENST00000587259 MARCKSP29966 332 aaPredicted RBP8.69□□□□□ -1.02
VMP1-204ENST00000587259 TPM4P67936 248 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 PLCB3Q01970 1234 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 AP3B2Q13367 1082 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 TPRNQ4KMQ1 711 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 PRR16Q569H4 304 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 ZNF484Q5JVG2 852 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 TMEM184AQ6ZMB5 413 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 FRMD5Q7Z6J6 570 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 NEK8Q86SG6 692 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 SLC39A11Q8N1S5 342 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 ST13P5Q8NFI4 369 aaPredicted RBP8.69□□□□□ -1.02
VMP1-204ENST00000587259 OXER1Q8TDS5 423 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 AK8Q96MA6 479 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 ZNF577Q9BSK1 485 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 TMEM117Q9H0C3 514 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 RBSNQ9H1K0 784 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 GOLPH3LQ9H4A5 285 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 SPG21Q9NZD8 308 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 DACH1Q9UI36 760 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 KCNH3Q9ULD8 1083 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 PCDHB6Q9Y5E3 794 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 SPTBN4Q9H254 2564 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 MYO10Q9HD67 2058 aa8.69□□□□□ -1.02
VMP1-204ENST00000587259 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.68□□□□□ -1.02
VMP1-204ENST00000587259 GOLGA6L19H0YKK7 550 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 PI15O43692 258 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 EDIL3O43854 480 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 ZC3H11AO75152 810 aaKnown RBP eCLIP8.68□□□□□ -1.02
VMP1-204ENST00000587259 CXCL14O95715 111 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 FOSP01100 380 aaPredicted RBP8.68□□□□□ -1.02
VMP1-204ENST00000587259 RPLP2P05387 115 aaKnown RBP8.68□□□□□ -1.02
VMP1-204ENST00000587259 SSBP05455 408 aaKnown RBP eCLIP8.68□□□□□ -1.02
VMP1-204ENST00000587259 MYL1P05976 194 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 SLC26A2P50443 739 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 GPC3P51654 580 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 BCAR1P56945 870 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 MTMR3Q13615 1198 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 CAMK4Q16566 473 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 HS1BP3Q53T59 392 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 DMRTA1Q5VZB9 504 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 SHC4Q6S5L8 630 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 TMC5Q6UXY8 1006 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 ABI1Q8IZP0 508 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 VPS52Q8N1B4 723 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 LRRC43Q8N309 656 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 LINC01465Q8N7H1 131 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 MRPL43Q8N983 215 aaKnown RBP8.68□□□□□ -1.02
VMP1-204ENST00000587259 TRIML1Q8N9V2 468 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms