RNA–Protein interactions for RNA: ENST00000585907.1

PRKAR1A-209, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-209	ENST00000585907	SPATA32	Q96LK8	384 aa		5.69	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	KIF2C	Q99661	725 aa		5.69	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	FEZ1	Q99689	392 aa		5.69	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	NAPB	Q9H115	298 aa		5.69	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	BCL11A	Q9H165	835 aa		5.69	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	RPAP3	Q9H6T3	665 aa	Predicted RBP	5.69	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	TXNRD2	Q9NNW7	524 aa		5.69	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	GABRQ	Q9UN88	632 aa		5.69	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	MYH4	Q9Y623	1939 aa		5.69	□□□□□ -1.5
PRKAR1A-209	ENST00000585907		A0A0D9SFI3	127 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	SLC15A5	A6NIM6	579 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	MINDY4B	A8MYZ0	360 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	RGS13	O14921	159 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	ATP2A1	O14983	1001 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	STRN	O43815	780 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	ADCY3	O60266	1144 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	PLA2G6	O60733	806 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	EFEMP2	O95967	443 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	FGA	P02671	866 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	PF4	P02776	101 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	APP	P05067	770 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	GJB1	P08034	283 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	HSPD1	P10809	573 aa	Known RBP	5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	TCF3	P15923	654 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	ARL4A	P40617	200 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	RTP1	P59025	263 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	ERVFRD-1	P60508	538 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	UBXN2A	P68543	259 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	PSMD2	Q13200	908 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	KIAA1755	Q5JYT7	1200 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	MAP3K21	Q5TCX8	1036 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	ZNF444	Q8N0Y2	327 aa	Predicted RBP	5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	ABRA	Q8N0Z2	381 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	GMCL1P1	Q8NEA9	526 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	RAET1E	Q8TD07	263 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	MZB1	Q8WU39	189 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	FAM227B	Q96M60	508 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	TCP11L1	Q9NUJ3	509 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	RNF19A	Q9NV58	838 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	MTMR4	Q9NYA4	1195 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	CCDC171	Q6TFL3	1326 aa		5.68	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	TNRC18	O15417	2968 aa	Predicted RBP	5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	COL11A1	P12107	1806 aa	Predicted RBP	5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	HTT	P42858	3142 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907		F5H6K3	240 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	TTLL1	O95922	423 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	HMGCR	P04035	888 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	ENDOU	P21128	410 aa	Known RBP	5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	COPB2	P35606	906 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	GJA8	P48165	433 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	SOX10	P56693	466 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	KLRC3	Q07444	240 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	PWP1	Q13610	501 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	GRB14	Q14449	540 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	ZYX	Q15942	572 aa	Known RBP	5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	TTC22	Q5TAA0	569 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	VPS53	Q5VIR6	699 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	GALNT18	Q6P9A2	607 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	CCDC129	Q6ZRS4	1044 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	GPR142	Q7Z601	462 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	PLEKHH3	Q7Z736	793 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	UBE2Q1	Q7Z7E8	422 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	ZNF589	Q86UQ0	364 aa	Predicted RBP	5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	RELL1	Q8IUW5	271 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	REPS2	Q8NFH8	660 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	FEZF2	Q8TBJ5	459 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	SH3TC2	Q8TF17	1288 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	TTC14	Q96N46	770 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	DSCC1	Q9BVC3	393 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	PORCN	Q9H237	461 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	MROH8	Q9H579	483 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	LUC7L	Q9NQ29	371 aa	Known RBP	5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	BTBD7	Q9P203	1132 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	TNFRSF10D	Q9UBN6	386 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	TAF6L	Q9Y6J9	622 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	RAD50	Q92878	1312 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	DOCK3	Q8IZD9	2030 aa		5.67	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	TMEM82	A0PJX8	343 aa		5.66	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	ZC3H12D	A2A288	527 aa	Known RBP	5.66	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	VWA5A	O00534	786 aa		5.66	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	SGPL1	O95470	568 aa		5.66	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	SLC25A27	O95847	323 aa		5.66	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	NDUFB10	O96000	172 aa		5.66	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	SYP	P08247	313 aa		5.66	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	ADRB1	P08588	477 aa		5.66	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	TSPY3	P0CV98	308 aa		5.66	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	TSPY8	P0CW00	308 aa		5.66	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	CCL5	P13501	91 aa		5.66	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	GSPT1	P15170	499 aa	Known RBP	5.66	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	SDHB	P21912	280 aa		5.66	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	RGS2	P41220	211 aa		5.66	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	CDR1	P51861	262 aa		5.66	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	OAZ1	P54368	228 aa		5.66	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	DAB2	P98082	770 aa		5.66	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	TFAP4	Q01664	338 aa		5.66	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	LAPTM5	Q13571	262 aa		5.66	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	MPP2	Q14168	576 aa		5.66	□□□□□ -1.5
PRKAR1A-209	ENST00000585907	SF3A1	Q15459	793 aa	Known RBP	5.66	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms