RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 PTENP60484 403 aa18.34■□□□□ 0.53
GCDH-203ENST00000585420 PAK1Q13153 545 aa18.34■□□□□ 0.53
GCDH-203ENST00000585420 COBLL1Q53SF7 1204 aa18.34■□□□□ 0.53
GCDH-203ENST00000585420 CT47A1Q5JQC4 288 aaPredicted RBP18.34■□□□□ 0.53
GCDH-203ENST00000585420 STXBP4Q6ZWJ1 553 aa18.34■□□□□ 0.53
GCDH-203ENST00000585420 ZNF720Q7Z2F6 126 aa18.34■□□□□ 0.53
GCDH-203ENST00000585420 LUZP1Q86V48 1076 aa18.34■□□□□ 0.53
GCDH-203ENST00000585420 GUF1Q8N442 669 aaKnown RBP18.34■□□□□ 0.53
GCDH-203ENST00000585420 AOPEPQ8N6M6 819 aa18.34■□□□□ 0.53
GCDH-203ENST00000585420 SCFD1Q8WVM8 642 aa18.34■□□□□ 0.53
GCDH-203ENST00000585420 NELFBQ8WX92 580 aa18.34■□□□□ 0.53
GCDH-203ENST00000585420 BPIFA3Q9BQP9 254 aa18.34■□□□□ 0.53
GCDH-203ENST00000585420 ZBED2Q9BTP6 218 aa18.34■□□□□ 0.53
GCDH-203ENST00000585420 KIFC3Q9BVG8 833 aa18.34■□□□□ 0.53
GCDH-203ENST00000585420 INO80BQ9C086 356 aaPredicted RBP18.34■□□□□ 0.53
GCDH-203ENST00000585420 KMT5AQ9NQR1 393 aa18.34■□□□□ 0.53
GCDH-203ENST00000585420 DENND3A2RUS2 1198 aa18.33■□□□□ 0.52
GCDH-203ENST00000585420 BECN2A8MW95 431 aa18.33■□□□□ 0.52
GCDH-203ENST00000585420 SLC16A4O15374 487 aa18.33■□□□□ 0.52
GCDH-203ENST00000585420 MAPTP10636 758 aaKnown RBP18.33■□□□□ 0.52
GCDH-203ENST00000585420 SFPQP23246 707 aaKnown RBP eCLIP18.33■□□□□ 0.52
GCDH-203ENST00000585420 STX17P56962 302 aa18.33■□□□□ 0.52
GCDH-203ENST00000585420 TFDP1Q14186 410 aa18.33■□□□□ 0.52
GCDH-203ENST00000585420 DSC3Q14574 896 aa18.33■□□□□ 0.52
GCDH-203ENST00000585420 PPP2R5AQ15172 486 aa18.33■□□□□ 0.52
GCDH-203ENST00000585420 ZC2HC1CQ53FD0 456 aaPredicted RBP18.33■□□□□ 0.52
GCDH-203ENST00000585420 SRGAP1Q7Z6B7 1085 aa18.33■□□□□ 0.52
GCDH-203ENST00000585420 NELFCDQ8IXH7 590 aa18.33■□□□□ 0.52
GCDH-203ENST00000585420 SLC17A8Q8NDX2 589 aa18.33■□□□□ 0.52
GCDH-203ENST00000585420 SPIRE2Q8WWL2 714 aa18.33■□□□□ 0.52
GCDH-203ENST00000585420 TIFAQ96CG3 184 aa18.33■□□□□ 0.52
GCDH-203ENST00000585420 DHTKD1Q96HY7 919 aaPredicted RBP18.33■□□□□ 0.52
GCDH-203ENST00000585420 RGS18Q9NS28 235 aa18.33■□□□□ 0.52
GCDH-203ENST00000585420 MSRAQ9UJ68 235 aa18.33■□□□□ 0.52
GCDH-203ENST00000585420 PCDHA11Q9Y5I1 949 aa18.33■□□□□ 0.52
GCDH-203ENST00000585420 LRRIQ4A6NIV6 560 aa18.32■□□□□ 0.52
GCDH-203ENST00000585420 PRPF6O94906 941 aaKnown RBP18.32■□□□□ 0.52
GCDH-203ENST00000585420 NAMPTP43490 491 aa18.32■□□□□ 0.52
GCDH-203ENST00000585420 PHKA2P46019 1235 aa18.32■□□□□ 0.52
GCDH-203ENST00000585420 NCKAP1LP55160 1127 aa18.32■□□□□ 0.52
GCDH-203ENST00000585420 POU5F1BQ06416 359 aa18.32■□□□□ 0.52
GCDH-203ENST00000585420 RAB30Q15771 203 aa18.32■□□□□ 0.52
GCDH-203ENST00000585420 GPR153Q6NV75 609 aa18.32■□□□□ 0.52
GCDH-203ENST00000585420 Q7L0L9 218 aa18.32■□□□□ 0.52
GCDH-203ENST00000585420 EPM2AIP1Q7L775 607 aaPredicted RBP18.32■□□□□ 0.52
GCDH-203ENST00000585420 CATSPER4Q7RTX7 472 aa18.32■□□□□ 0.52
GCDH-203ENST00000585420 CRIPAKQ8N1N5 446 aa18.32■□□□□ 0.52
GCDH-203ENST00000585420 NKX2-4Q9H2Z4 354 aa18.32■□□□□ 0.52
GCDH-203ENST00000585420 KCNG1Q9UIX4 513 aa18.32■□□□□ 0.52
GCDH-203ENST00000585420 RWDD2AQ9UIY3 292 aa18.32■□□□□ 0.52
GCDH-203ENST00000585420 PCDHB13Q9Y5F0 798 aa18.32■□□□□ 0.52
GCDH-203ENST00000585420 GBF1Q92538 1859 aa18.32■□□□□ 0.52
GCDH-203ENST00000585420 LCHNA4D1U4 455 aa18.32■□□□□ 0.52
GCDH-203ENST00000585420 EIF3DO15371 548 aaKnown RBP eCLIP18.32■□□□□ 0.52
GCDH-203ENST00000585420 CA3P07451 260 aa18.32■□□□□ 0.52
GCDH-203ENST00000585420 ZSCAN20P17040 1043 aaPredicted RBP18.32■□□□□ 0.52
GCDH-203ENST00000585420 IBSPP21815 317 aaPredicted RBP18.32■□□□□ 0.52
GCDH-203ENST00000585420 MYL5Q02045 173 aa18.32■□□□□ 0.52
GCDH-203ENST00000585420 HAUS6Q7Z4H7 955 aa18.32■□□□□ 0.52
GCDH-203ENST00000585420 DHX40Q8IX18 779 aaKnown RBP18.32■□□□□ 0.52
GCDH-203ENST00000585420 DEPTORQ8TB45 409 aa18.32■□□□□ 0.52
GCDH-203ENST00000585420 FAM161BQ96MY7 647 aa18.32■□□□□ 0.52
GCDH-203ENST00000585420 RAD9AQ99638 391 aa18.32■□□□□ 0.52
GCDH-203ENST00000585420 NTPCRQ9BSD7 190 aaKnown RBP18.32■□□□□ 0.52
GCDH-203ENST00000585420 NFKBIZQ9BYH8 718 aa18.32■□□□□ 0.52
GCDH-203ENST00000585420 TTYH1Q9H313 450 aaPredicted RBP18.32■□□□□ 0.52
GCDH-203ENST00000585420 COL6A3P12111 3177 aa18.31■□□□□ 0.52
GCDH-203ENST00000585420 C9IYK1 514 aa18.31■□□□□ 0.52
GCDH-203ENST00000585420 GOLGA6L19H0YKK7 550 aa18.31■□□□□ 0.52
GCDH-203ENST00000585420 INO80B-WBP1J3KQ70 363 aa18.31■□□□□ 0.52
GCDH-203ENST00000585420 ARHGEF15O94989 841 aa18.31■□□□□ 0.52
GCDH-203ENST00000585420 MBTD1Q05BQ5 628 aa18.31■□□□□ 0.52
GCDH-203ENST00000585420 ALCAMQ13740 583 aa18.31■□□□□ 0.52
GCDH-203ENST00000585420 IQCB1Q15051 598 aa18.31■□□□□ 0.52
GCDH-203ENST00000585420 SLC24A5Q71RS6 500 aa18.31■□□□□ 0.52
GCDH-203ENST00000585420 IFNLR1Q8IU57 520 aaPredicted RBP18.31■□□□□ 0.52
GCDH-203ENST00000585420 TMEM161BQ8NDZ6 487 aa18.31■□□□□ 0.52
GCDH-203ENST00000585420 P2RX5Q93086 422 aa18.31■□□□□ 0.52
GCDH-203ENST00000585420 PIN4Q9Y237 131 aaKnown RBP18.31■□□□□ 0.52
GCDH-203ENST00000585420 BICDL2A1A5D9 508 aa18.3■□□□□ 0.52
GCDH-203ENST00000585420 TRIM49BA6NDI0 452 aa18.3■□□□□ 0.52
GCDH-203ENST00000585420 SMTNL1A8MU46 457 aa18.3■□□□□ 0.52
GCDH-203ENST00000585420 H0YCG3 227 aa18.3■□□□□ 0.52
GCDH-203ENST00000585420 HOXA11P31270 313 aaPredicted RBP18.3■□□□□ 0.52
GCDH-203ENST00000585420 PMS1P54277 932 aaKnown RBP18.3■□□□□ 0.52
GCDH-203ENST00000585420 HTRA4P83105 476 aaPredicted RBP18.3■□□□□ 0.52
GCDH-203ENST00000585420 KCNA1Q09470 495 aa18.3■□□□□ 0.52
GCDH-203ENST00000585420 KNOP1Q1ED39 458 aaKnown RBP18.3■□□□□ 0.52
GCDH-203ENST00000585420 BMT2Q1RMZ1 405 aa18.3■□□□□ 0.52
GCDH-203ENST00000585420 ZNF507Q8TCN5 953 aa18.3■□□□□ 0.52
GCDH-203ENST00000585420 ST6GALNAC4Q9H4F1 302 aa18.3■□□□□ 0.52
GCDH-203ENST00000585420 UBE4BO95155 1302 aa18.3■□□□□ 0.52
GCDH-203ENST00000585420 ADGRA3Q8IWK6 1321 aa18.3■□□□□ 0.52
GCDH-203ENST00000585420 TTC3P53804 2025 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 SPTBN5Q9NRC6 3674 aaKnown RBP18.29■□□□□ 0.52
GCDH-203ENST00000585420 FSD2A1L4K1 749 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 IKBKBO14920 756 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 PPP1R37O75864 691 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 CCNE1P24864 410 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 FAM189BP81408 668 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms