RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 TMEM150BA6NC51 233 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 ADAMTS3O15072 1205 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 SPTLC1O15269 473 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 GAS2O43903 313 aaKnown RBP11.45□□□□□ -0.58
GGA3-219ENST00000584550 SOD2P04179 222 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 SKIP12755 728 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 TGM1P22735 817 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 SFPQP23246 707 aaKnown RBP eCLIP11.45□□□□□ -0.58
GGA3-219ENST00000584550 RCAN1P53805 252 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 AKAP17AQ02040 695 aaKnown RBP11.45□□□□□ -0.58
GGA3-219ENST00000584550 PRKCEQ02156 737 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 FUT2Q10981 343 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 UGCGQ16739 394 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 PRR16Q569H4 304 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 PPM1JQ5JR12 505 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 ELMSAN1Q6PJG2 1045 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 AGMOQ6ZNB7 445 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 CATSPER4Q7RTX7 472 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 RHPN2Q8IUC4 686 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 ZNF710Q8N1W2 664 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 C22orf23Q9BZE7 217 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 NT5C3AQ9H0P0 336 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 PARD6AQ9NPB6 346 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 DPP7Q9UHL4 492 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 FBXO4Q9UKT5 387 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 PCDHB2Q9Y5E7 798 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 PCDHGA2Q9Y5H1 932 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 USP24Q9UPU5 2620 aa11.44□□□□□ -0.58
GGA3-219ENST00000584550 DOCK6Q96HP0 2047 aa11.44□□□□□ -0.58
GGA3-219ENST00000584550 F8W810 466 aa11.44□□□□□ -0.58
GGA3-219ENST00000584550 CPLX1O14810 134 aa11.44□□□□□ -0.58
GGA3-219ENST00000584550 TGM5O43548 720 aa11.44□□□□□ -0.58
GGA3-219ENST00000584550 CHMP2AO43633 222 aa11.44□□□□□ -0.58
GGA3-219ENST00000584550 OR1G1P47890 313 aa11.44□□□□□ -0.58
GGA3-219ENST00000584550 GLUD2P49448 558 aa11.44□□□□□ -0.58
GGA3-219ENST00000584550 CLK2P49760 499 aaKnown RBP11.44□□□□□ -0.58
GGA3-219ENST00000584550 EVCP57679 992 aa11.44□□□□□ -0.58
GGA3-219ENST00000584550 SPEM2Q0P670 501 aa11.44□□□□□ -0.58
GGA3-219ENST00000584550 AP3B2Q13367 1082 aa11.44□□□□□ -0.58
GGA3-219ENST00000584550 MLF2Q15773 248 aaPredicted RBP11.44□□□□□ -0.58
GGA3-219ENST00000584550 MTERF2Q49AM1 385 aa11.44□□□□□ -0.58
GGA3-219ENST00000584550 SLC44A4Q53GD3 710 aa11.44□□□□□ -0.58
GGA3-219ENST00000584550 CYP26C1Q6V0L0 522 aa11.44□□□□□ -0.58
GGA3-219ENST00000584550 PGBD4Q96DM1 585 aa11.44□□□□□ -0.58
GGA3-219ENST00000584550 ZNF274Q96GC6 653 aaPredicted RBP11.44□□□□□ -0.58
GGA3-219ENST00000584550 TRAIPQ9BWF2 469 aa11.44□□□□□ -0.58
GGA3-219ENST00000584550 SLC26A6Q9BXS9 759 aa11.44□□□□□ -0.58
GGA3-219ENST00000584550 UPF2Q9HAU5 1272 aaKnown RBP11.44□□□□□ -0.58
GGA3-219ENST00000584550 DISC1Q9NRI5 854 aa11.44□□□□□ -0.58
GGA3-219ENST00000584550 MARCH5Q9NX47 278 aa11.44□□□□□ -0.58
GGA3-219ENST00000584550 ZSCAN32Q9NX65 697 aa11.44□□□□□ -0.58
GGA3-219ENST00000584550 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.44□□□□□ -0.58
GGA3-219ENST00000584550 WDR64B1ANS9 1081 aa11.43□□□□□ -0.58
GGA3-219ENST00000584550 DTNBO60941 627 aa11.43□□□□□ -0.58
GGA3-219ENST00000584550 ZNF623O75123 536 aa11.43□□□□□ -0.58
GGA3-219ENST00000584550 RPL17P18621 184 aaKnown RBP11.43□□□□□ -0.58
GGA3-219ENST00000584550 FSHRP23945 695 aa11.43□□□□□ -0.58
GGA3-219ENST00000584550 NTHL1P78549 312 aa11.43□□□□□ -0.58
GGA3-219ENST00000584550 COL9A2Q14055 689 aaPredicted RBP11.43□□□□□ -0.58
GGA3-219ENST00000584550 ANKRD1Q15327 319 aa11.43□□□□□ -0.58
GGA3-219ENST00000584550 GRASPQ7Z6J2 395 aaPredicted RBP11.43□□□□□ -0.58
GGA3-219ENST00000584550 ZBTB44Q8NCP5 570 aa11.43□□□□□ -0.58
GGA3-219ENST00000584550 RSPH1Q8WYR4 309 aa11.43□□□□□ -0.58
GGA3-219ENST00000584550 GJA10Q969M2 543 aa11.43□□□□□ -0.58
GGA3-219ENST00000584550 NLRP4Q96MN2 994 aa11.43□□□□□ -0.58
GGA3-219ENST00000584550 TMEM175Q9BSA9 504 aa11.43□□□□□ -0.58
GGA3-219ENST00000584550 HERC2P3Q9BVR0 1158 aa11.43□□□□□ -0.58
GGA3-219ENST00000584550 PRKD2Q9BZL6 878 aa11.43□□□□□ -0.58
GGA3-219ENST00000584550 EPC1Q9H2F5 836 aa11.43□□□□□ -0.58
GGA3-219ENST00000584550 SLKQ9H2G2 1235 aaPredicted RBP11.43□□□□□ -0.58
GGA3-219ENST00000584550 RSAD1Q9HA92 442 aa11.43□□□□□ -0.58
GGA3-219ENST00000584550 SUCLA2Q9P2R7 463 aaPredicted RBP11.43□□□□□ -0.58
GGA3-219ENST00000584550 STK39Q9UEW8 545 aa11.43□□□□□ -0.58
GGA3-219ENST00000584550 SEPT9Q9UHD8 586 aaPredicted RBP11.43□□□□□ -0.58
GGA3-219ENST00000584550 TPCN1Q9ULQ1 816 aa11.43□□□□□ -0.58
GGA3-219ENST00000584550 SSX2IPQ9Y2D8 614 aa11.43□□□□□ -0.58
GGA3-219ENST00000584550 BAHCC1Q9P281 2608 aa11.43□□□□□ -0.58
GGA3-219ENST00000584550 MTCL1Q9Y4B5 1905 aaKnown RBP11.43□□□□□ -0.58
GGA3-219ENST00000584550 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.42□□□□□ -0.58
GGA3-219ENST00000584550 LILRB5O75023 590 aa11.42□□□□□ -0.58
GGA3-219ENST00000584550 CYP3A4P08684 503 aa11.42□□□□□ -0.58
GGA3-219ENST00000584550 DNM2P50570 870 aa11.42□□□□□ -0.58
GGA3-219ENST00000584550 RAB27AP51159 221 aa11.42□□□□□ -0.58
GGA3-219ENST00000584550 SETQ01105 290 aaPredicted RBP11.42□□□□□ -0.58
GGA3-219ENST00000584550 SSRP1Q08945 709 aaKnown RBP11.42□□□□□ -0.58
GGA3-219ENST00000584550 ZBTB41Q5SVQ8 909 aa11.42□□□□□ -0.58
GGA3-219ENST00000584550 PPP1R18Q6NYC8 613 aa11.42□□□□□ -0.58
GGA3-219ENST00000584550 CPLX2Q6PUV4 134 aaKnown RBP11.42□□□□□ -0.58
GGA3-219ENST00000584550 CRYGNQ8WXF5 182 aa11.42□□□□□ -0.58
GGA3-219ENST00000584550 RABGGTAQ92696 567 aa11.42□□□□□ -0.58
GGA3-219ENST00000584550 KXD1Q9BQD3 176 aa11.42□□□□□ -0.58
GGA3-219ENST00000584550 DDX23Q9BUQ8 820 aaKnown RBP11.42□□□□□ -0.58
GGA3-219ENST00000584550 RHOBTB2Q9BYZ6 727 aa11.42□□□□□ -0.58
GGA3-219ENST00000584550 RXFP1Q9HBX9 757 aa11.42□□□□□ -0.58
GGA3-219ENST00000584550 LTB4R2Q9NPC1 389 aa11.42□□□□□ -0.58
GGA3-219ENST00000584550 BARHL2Q9NY43 387 aa11.42□□□□□ -0.58
GGA3-219ENST00000584550 KANSL3Q9P2N6 904 aa11.42□□□□□ -0.58
GGA3-219ENST00000584550 GMEB2Q9UKD1 530 aa11.42□□□□□ -0.58
GGA3-219ENST00000584550 PRPF3O43395 683 aaKnown RBP11.41□□□□□ -0.58
GGA3-219ENST00000584550 IFNAR1P17181 557 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms