RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 UNC45AQ9H3U1 944 aa12.51□□□□□ -0.41
CCDC47-206ENST00000584112 ENTPD7Q9NQZ7 604 aa12.51□□□□□ -0.41
CCDC47-206ENST00000584112 LRFN2Q9ULH4 789 aa12.51□□□□□ -0.41
CCDC47-206ENST00000584112 MTF2Q9Y483 593 aaPredicted RBP12.51□□□□□ -0.41
CCDC47-206ENST00000584112 CCDC194A0A1B0GVG4 234 aa12.5□□□□□ -0.41
CCDC47-206ENST00000584112 DENND3A2RUS2 1198 aa12.5□□□□□ -0.41
CCDC47-206ENST00000584112 PSMD10O75832 226 aa12.5□□□□□ -0.41
CCDC47-206ENST00000584112 SARSP49591 514 aaKnown RBP12.5□□□□□ -0.41
CCDC47-206ENST00000584112 PRKCEQ02156 737 aa12.5□□□□□ -0.41
CCDC47-206ENST00000584112 C19orf57Q0VDD7 668 aa12.5□□□□□ -0.41
CCDC47-206ENST00000584112 SF3A2Q15428 464 aaKnown RBP12.5□□□□□ -0.41
CCDC47-206ENST00000584112 NPY5RQ15761 445 aa12.5□□□□□ -0.41
CCDC47-206ENST00000584112 KIZQ2M2Z5 673 aa12.5□□□□□ -0.41
CCDC47-206ENST00000584112 TMEM266Q2M3C6 531 aa12.5□□□□□ -0.41
CCDC47-206ENST00000584112 AASDHQ4L235 1098 aaPredicted RBP12.5□□□□□ -0.41
CCDC47-206ENST00000584112 DCLRE1AQ6PJP8 1040 aa12.5□□□□□ -0.41
CCDC47-206ENST00000584112 MIER3Q7Z3K6 550 aa12.5□□□□□ -0.41
CCDC47-206ENST00000584112 RTN4RL1Q86UN2 441 aaPredicted RBP12.5□□□□□ -0.41
CCDC47-206ENST00000584112 MBOAT7Q96N66 472 aa12.5□□□□□ -0.41
CCDC47-206ENST00000584112 AIFM3Q96NN9 605 aa12.5□□□□□ -0.41
CCDC47-206ENST00000584112 TCF25Q9BQ70 676 aa12.5□□□□□ -0.41
CCDC47-206ENST00000584112 PHF20Q9BVI0 1012 aa12.5□□□□□ -0.41
CCDC47-206ENST00000584112 C1orf112Q9NSG2 853 aa12.5□□□□□ -0.41
CCDC47-206ENST00000584112 DDX25Q9UHL0 483 aaKnown RBP12.5□□□□□ -0.41
CCDC47-206ENST00000584112 AKT3Q9Y243 479 aa12.5□□□□□ -0.41
CCDC47-206ENST00000584112 NOC2LQ9Y3T9 749 aaKnown RBP12.5□□□□□ -0.41
CCDC47-206ENST00000584112 ZNF862O60290 1169 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 KRT38O76015 456 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 TDP2O95551 362 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 VTNP04004 478 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 GCFC2P16383 781 aaKnown RBP12.49□□□□□ -0.41
CCDC47-206ENST00000584112 AK2P54819 239 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 ZNF252P-AS1Q0IIN9 211 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 INF2Q27J81 1249 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 SPOUT1Q5T280 376 aaKnown RBP12.49□□□□□ -0.41
CCDC47-206ENST00000584112 PDE12Q6L8Q7 609 aaKnown RBP12.49□□□□□ -0.41
CCDC47-206ENST00000584112 EFCAB12Q6NXP0 572 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 OTOP3Q7RTS5 596 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 SLC44A3Q8N4M1 653 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 TMEM40Q8WWA1 233 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 PIK3R5Q8WYR1 880 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 OSMRQ99650 979 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 NAP1L4Q99733 375 aaKnown RBP12.49□□□□□ -0.41
CCDC47-206ENST00000584112 LSM14BQ9BX40 385 aaKnown RBP12.49□□□□□ -0.41
CCDC47-206ENST00000584112 BCO2Q9BYV7 579 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 TMX1Q9H3N1 280 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 CDHR5Q9HBB8 845 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 RGS18Q9NS28 235 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 IGSF9Q9P2J2 1179 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 TPCN1Q9ULQ1 816 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 ST3GAL5Q9UNP4 418 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 KCNJ14Q9UNX9 436 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 PCDHB7Q9Y5E2 793 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 PCDHB12Q9Y5F1 795 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 MYO9AB2RTY4 2548 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 DOPEY1Q5JWR5 2465 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 DOCK8Q8NF50 2099 aa12.49□□□□□ -0.41
CCDC47-206ENST00000584112 N4BP1O75113 896 aaKnown RBP12.48□□□□□ -0.41
CCDC47-206ENST00000584112 GPR32O75388 356 aa12.48□□□□□ -0.41
CCDC47-206ENST00000584112 C1QL1O75973 258 aa12.48□□□□□ -0.41
CCDC47-206ENST00000584112 CENPBP07199 599 aaPredicted RBP12.48□□□□□ -0.41
CCDC47-206ENST00000584112 SRFP11831 508 aa12.48□□□□□ -0.41
CCDC47-206ENST00000584112 IBSPP21815 317 aaPredicted RBP12.48□□□□□ -0.41
CCDC47-206ENST00000584112 CLCN3P51790 818 aa12.48□□□□□ -0.41
CCDC47-206ENST00000584112 LIMK1P53667 647 aa12.48□□□□□ -0.41
CCDC47-206ENST00000584112 UGCGQ16739 394 aa12.48□□□□□ -0.41
CCDC47-206ENST00000584112 LETM2Q2VYF4 491 aa12.48□□□□□ -0.41
CCDC47-206ENST00000584112 XKR3Q5GH77 459 aa12.48□□□□□ -0.41
CCDC47-206ENST00000584112 TMC5Q6UXY8 1006 aa12.48□□□□□ -0.41
CCDC47-206ENST00000584112 SLC24A5Q71RS6 500 aa12.48□□□□□ -0.41
CCDC47-206ENST00000584112 NEK8Q86SG6 692 aa12.48□□□□□ -0.41
CCDC47-206ENST00000584112 FAM228AQ86W67 206 aa12.48□□□□□ -0.41
CCDC47-206ENST00000584112 THNSL1Q8IYQ7 743 aa12.48□□□□□ -0.41
CCDC47-206ENST00000584112 LINC01465Q8N7H1 131 aa12.48□□□□□ -0.41
CCDC47-206ENST00000584112 ST13P5Q8NFI4 369 aaPredicted RBP12.48□□□□□ -0.41
CCDC47-206ENST00000584112 ETNPPLQ8TBG4 499 aa12.48□□□□□ -0.41
CCDC47-206ENST00000584112 PPP1R16BQ96T49 567 aa12.48□□□□□ -0.41
CCDC47-206ENST00000584112 ADAM2Q99965 735 aa12.48□□□□□ -0.41
CCDC47-206ENST00000584112 BRMS1Q9HCU9 246 aa12.48□□□□□ -0.41
CCDC47-206ENST00000584112 ORC3Q9UBD5 711 aaPredicted RBP12.48□□□□□ -0.41
CCDC47-206ENST00000584112 GREB1Q4ZG55 1949 aa12.48□□□□□ -0.41
CCDC47-206ENST00000584112 COL12A1Q99715 3063 aa12.48□□□□□ -0.41
CCDC47-206ENST00000584112 ABCA12Q86UK0 2595 aa12.47□□□□□ -0.41
CCDC47-206ENST00000584112 TDRD15B5MCY1 1934 aaKnown RBP12.47□□□□□ -0.41
CCDC47-206ENST00000584112 C9IYK1 514 aa12.47□□□□□ -0.41
CCDC47-206ENST00000584112 ARHGAP6O43182 974 aa12.47□□□□□ -0.41
CCDC47-206ENST00000584112 DKC1O60832 514 aaKnown RBP eCLIP12.47□□□□□ -0.41
CCDC47-206ENST00000584112 CLASP2O75122 1294 aaKnown RBP12.47□□□□□ -0.41
CCDC47-206ENST00000584112 NLRP11P59045 1033 aaKnown RBP12.47□□□□□ -0.41
CCDC47-206ENST00000584112 CDC42EP1Q00587 391 aa12.47□□□□□ -0.41
CCDC47-206ENST00000584112 STPG1Q5TH74 334 aa12.47□□□□□ -0.41
CCDC47-206ENST00000584112 PPP4R3AQ6IN85 833 aa12.47□□□□□ -0.41
CCDC47-206ENST00000584112 B3GNT9Q6UX72 402 aa12.47□□□□□ -0.41
CCDC47-206ENST00000584112 CCDC149Q6ZUS6 474 aa12.47□□□□□ -0.41
CCDC47-206ENST00000584112 GJA10Q969M2 543 aa12.47□□□□□ -0.41
CCDC47-206ENST00000584112 FAM20AQ96MK3 541 aa12.47□□□□□ -0.41
CCDC47-206ENST00000584112 SCLT1Q96NL6 688 aa12.47□□□□□ -0.41
CCDC47-206ENST00000584112 NIFKQ9BYG3 293 aaKnown RBP12.47□□□□□ -0.41
CCDC47-206ENST00000584112 SEPT9Q9UHD8 586 aaPredicted RBP12.47□□□□□ -0.41
CCDC47-206ENST00000584112 SPTAN1Q13813 2472 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms