RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 KIAA0100Q14667 2235 aaKnown RBP10.07□□□□□ -0.8
CASC3-209ENST00000583902 KCNJ18B7U540 433 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 PMM2O15305 246 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 CLDN3O15551 220 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 TREHO43280 583 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 N4BP1O75113 896 aaKnown RBP10.07□□□□□ -0.8
CASC3-209ENST00000583902 GPR32O75388 356 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 ERLIN2O94905 339 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 SERPINC1P01008 464 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 PRKCBP05771 671 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 SRGAP2CP0DJJ0 459 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 DARSP14868 501 aaKnown RBP10.07□□□□□ -0.8
CASC3-209ENST00000583902 CDC25BP30305 580 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 HOXD13P35453 343 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 AP3M2P53677 418 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 STX17P56962 302 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 NLRP11P59045 1033 aaKnown RBP10.07□□□□□ -0.8
CASC3-209ENST00000583902 MRPS6P82932 125 aaKnown RBP10.07□□□□□ -0.8
CASC3-209ENST00000583902 CETN1Q12798 172 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 BFSP2Q13515 415 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 PRPF4BQ13523 1007 aaKnown RBP10.07□□□□□ -0.8
CASC3-209ENST00000583902 KCNJ12Q14500 433 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 MAN2A1Q16706 1144 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 ZC2HC1CQ53FD0 456 aaPredicted RBP10.07□□□□□ -0.8
CASC3-209ENST00000583902 FAM47CQ5HY64 1035 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 FAM26DQ5JW98 314 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 ARMCX5Q6P1M9 558 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 LRRC55Q6ZSA7 311 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 NELFCDQ8IXH7 590 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 TRAPPC12Q8WVT3 735 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 RSPH1Q8WYR4 309 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 HPS3Q969F9 1004 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 RNF25Q96BH1 459 aaPredicted RBP10.07□□□□□ -0.8
CASC3-209ENST00000583902 NLRP4Q96MN2 994 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 SCLT1Q96NL6 688 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 ADPGKQ9BRR6 497 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 CELF4Q9BZC1 486 aaKnown RBP10.07□□□□□ -0.8
CASC3-209ENST00000583902 TRIM5Q9C035 493 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 ADAMTS10Q9H324 1103 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 ARMCX3Q9UH62 379 aaPredicted RBP10.07□□□□□ -0.8
CASC3-209ENST00000583902 TNFSF13BQ9Y275 285 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 CNTNAP2Q9UHC6 1331 aa10.07□□□□□ -0.8
CASC3-209ENST00000583902 ZMYM2Q9UBW7 1377 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 GTPBP10A4D1E9 387 aaKnown RBP10.06□□□□□ -0.8
CASC3-209ENST00000583902 INO80B-WBP1J3KQ70 363 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 N4BP3O15049 544 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 GPR182O15218 404 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 P4HA2O15460 535 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 EXTL3O43909 919 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 EXOC3O60645 756 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 TFRCP02786 760 aaKnown RBP10.06□□□□□ -0.8
CASC3-209ENST00000583902 KRT13P13646 458 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 PTGS1P23219 599 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 GTF2H1P32780 548 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 CDK7P50613 346 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 UBASH3AP57075 661 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 FANCCQ00597 558 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 MBTD1Q05BQ5 628 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 MCL1Q07820 350 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 DCAF4L1Q3SXM0 396 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 CCDC40Q4G0X9 1142 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 MPZL3Q6UWV2 235 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 ANKRD33Q7Z3H0 272 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 CD302Q8IX05 232 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 GPD1LQ8N335 351 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 TMC2Q8TDI7 906 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 POMGNT1Q8WZA1 660 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 MED15Q96RN5 788 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 ACO2Q99798 780 aaKnown RBP10.06□□□□□ -0.8
CASC3-209ENST00000583902 HSD3B7Q9H2F3 369 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 TRPV2Q9Y5S1 764 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 ADGRA3Q8IWK6 1321 aa10.06□□□□□ -0.8
CASC3-209ENST00000583902 A0A087WZ62 844 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 A0A0B4J269 797 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 A0A1B0GTH6 734 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 A0A1B0GUA9 196 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 A0A1W2PQC6 194 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 TRIM49BA6NDI0 452 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 ZNF233A6NK53 670 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 DCDC2CA8MYV0 355 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 MCF2P10911 925 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 SKIP12755 728 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 PROZP22891 400 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 MTIF2P46199 727 aaKnown RBP10.05□□□□□ -0.8
CASC3-209ENST00000583902 PMS1P54277 932 aaKnown RBP10.05□□□□□ -0.8
CASC3-209ENST00000583902 CCDC173Q0VFZ6 552 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 DRP2Q13474 957 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 TRIM14Q14142 442 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 NOLC1Q14978 699 aaKnown RBP eCLIP10.05□□□□□ -0.8
CASC3-209ENST00000583902 SNX17Q15036 470 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 MTFR1Q15390 333 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 FKBP15Q5T1M5 1219 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 ATF7IP2Q5U623 682 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 GDF6Q6KF10 455 aaPredicted RBP10.05□□□□□ -0.8
CASC3-209ENST00000583902 NOTUMQ6P988 496 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 NT5DC4Q86YG4 428 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 FMNL3Q8IVF7 1028 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 HACE1Q8IYU2 909 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 DNAJB3Q8WWF6 145 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 CNOT6LQ96LI5 555 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms