RNA–Protein interactions for RNA: ENST00000583391.1

ERBB2-215, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-215ENST00000583391 LIG4P49917 911 aa14.3□□□□□ -0.12
ERBB2-215ENST00000583391 KCNA1Q09470 495 aa14.3□□□□□ -0.12
ERBB2-215ENST00000583391 STK4Q13043 487 aa14.3□□□□□ -0.12
ERBB2-215ENST00000583391 ALCAMQ13740 583 aa14.3□□□□□ -0.12
ERBB2-215ENST00000583391 ZNF568Q3ZCX4 644 aa14.3□□□□□ -0.12
ERBB2-215ENST00000583391 PRPF38BQ5VTL8 546 aaKnown RBP14.3□□□□□ -0.12
ERBB2-215ENST00000583391 EEF1DP3Q658K8 133 aa14.3□□□□□ -0.12
ERBB2-215ENST00000583391 SLC27A1Q6PCB7 646 aa14.3□□□□□ -0.12
ERBB2-215ENST00000583391 RTN4RL1Q86UN2 441 aaPredicted RBP14.3□□□□□ -0.12
ERBB2-215ENST00000583391 NELFCDQ8IXH7 590 aa14.3□□□□□ -0.12
ERBB2-215ENST00000583391 KCNN1Q92952 543 aa14.3□□□□□ -0.12
ERBB2-215ENST00000583391 CCDC51Q96ER9 411 aa14.3□□□□□ -0.12
ERBB2-215ENST00000583391 GSDMAQ96QA5 445 aa14.3□□□□□ -0.12
ERBB2-215ENST00000583391 ACCSQ96QU6 501 aa14.3□□□□□ -0.12
ERBB2-215ENST00000583391 ACO2Q99798 780 aaKnown RBP14.3□□□□□ -0.12
ERBB2-215ENST00000583391 STRA6Q9BX79 667 aa14.3□□□□□ -0.12
ERBB2-215ENST00000583391 EIF2AQ9BY44 585 aaKnown RBP14.3□□□□□ -0.12
ERBB2-215ENST00000583391 IKZF4Q9H2S9 585 aa14.3□□□□□ -0.12
ERBB2-215ENST00000583391 CHST12Q9NRB3 414 aa14.3□□□□□ -0.12
ERBB2-215ENST00000583391 RGS18Q9NS28 235 aa14.3□□□□□ -0.12
ERBB2-215ENST00000583391 PCDHB13Q9Y5F0 798 aa14.3□□□□□ -0.12
ERBB2-215ENST00000583391 UBE4BO95155 1302 aa14.3□□□□□ -0.12
ERBB2-215ENST00000583391 LAMA3Q16787 3333 aa14.3□□□□□ -0.12
ERBB2-215ENST00000583391 ZMYM2Q9UBW7 1377 aa14.3□□□□□ -0.12
ERBB2-215ENST00000583391 ENPP3O14638 875 aa14.29□□□□□ -0.12
ERBB2-215ENST00000583391 AMHP03971 560 aa14.29□□□□□ -0.12
ERBB2-215ENST00000583391 PTMSP20962 102 aa14.29□□□□□ -0.12
ERBB2-215ENST00000583391 BMP8BP34820 402 aa14.29□□□□□ -0.12
ERBB2-215ENST00000583391 MATR3P43243 847 aaKnown RBP eCLIP14.29□□□□□ -0.12
ERBB2-215ENST00000583391 SARSP49591 514 aaKnown RBP14.29□□□□□ -0.12
ERBB2-215ENST00000583391 PSMD2Q13200 908 aa14.29□□□□□ -0.12
ERBB2-215ENST00000583391 UBXN11Q5T124 520 aa14.29□□□□□ -0.12
ERBB2-215ENST00000583391 ISM2Q6H9L7 571 aa14.29□□□□□ -0.12
ERBB2-215ENST00000583391 EPM2AIP1Q7L775 607 aaPredicted RBP14.29□□□□□ -0.12
ERBB2-215ENST00000583391 TMCO2Q7Z6W1 182 aaPredicted RBP14.29□□□□□ -0.12
ERBB2-215ENST00000583391 ZBTB33Q86T24 672 aa14.29□□□□□ -0.12
ERBB2-215ENST00000583391 SMYD4Q8IYR2 804 aaPredicted RBP14.29□□□□□ -0.12
ERBB2-215ENST00000583391 SYCP3Q8IZU3 236 aa14.29□□□□□ -0.12
ERBB2-215ENST00000583391 RNF169Q8NCN4 708 aa14.29□□□□□ -0.12
ERBB2-215ENST00000583391 SPATA20Q8TB22 786 aa14.29□□□□□ -0.12
ERBB2-215ENST00000583391 SCFD1Q8WVM8 642 aa14.29□□□□□ -0.12
ERBB2-215ENST00000583391 ADPGKQ9BRR6 497 aa14.29□□□□□ -0.12
ERBB2-215ENST00000583391 TRIM6Q9C030 488 aaPredicted RBP14.29□□□□□ -0.12
ERBB2-215ENST00000583391 C1orf112Q9NSG2 853 aa14.29□□□□□ -0.12
ERBB2-215ENST00000583391 FAM105AQ9NUU6 356 aa14.29□□□□□ -0.12
ERBB2-215ENST00000583391 MAN1B1Q9UKM7 699 aa14.29□□□□□ -0.12
ERBB2-215ENST00000583391 SLC4A7Q9Y6M7 1214 aa14.29□□□□□ -0.12
ERBB2-215ENST00000583391 A0A1B0GUA9 196 aa14.28□□□□□ -0.12
ERBB2-215ENST00000583391 TISP43B9A030 160 aa14.28□□□□□ -0.12
ERBB2-215ENST00000583391 C9IYK1 514 aa14.28□□□□□ -0.12
ERBB2-215ENST00000583391 UPP2O95045 317 aa14.28□□□□□ -0.12
ERBB2-215ENST00000583391 PIGRP01833 764 aa14.28□□□□□ -0.12
ERBB2-215ENST00000583391 RAB27AP51159 221 aa14.28□□□□□ -0.12
ERBB2-215ENST00000583391 NOLC1Q14978 699 aaKnown RBP eCLIP14.28□□□□□ -0.12
ERBB2-215ENST00000583391 DCAF4L1Q3SXM0 396 aa14.28□□□□□ -0.12
ERBB2-215ENST00000583391 RASIP1Q5U651 963 aa14.28□□□□□ -0.12
ERBB2-215ENST00000583391 FAM117BQ6P1L5 589 aa14.28□□□□□ -0.12
ERBB2-215ENST00000583391 SLC39A4Q6P5W5 647 aa14.28□□□□□ -0.12
ERBB2-215ENST00000583391 MPZL3Q6UWV2 235 aa14.28□□□□□ -0.12
ERBB2-215ENST00000583391 ZPBP2Q6X784 338 aa14.28□□□□□ -0.12
ERBB2-215ENST00000583391 SLC24A5Q71RS6 500 aa14.28□□□□□ -0.12
ERBB2-215ENST00000583391 TDHQ8IZJ6 230 aa14.28□□□□□ -0.12
ERBB2-215ENST00000583391 ZBTB45Q96K62 511 aaPredicted RBP14.28□□□□□ -0.12
ERBB2-215ENST00000583391 SLC9A7Q96T83 725 aa14.28□□□□□ -0.12
ERBB2-215ENST00000583391 APOL6Q9BWW8 343 aa14.28□□□□□ -0.12
ERBB2-215ENST00000583391 PRO3102Q9H379 93 aa14.28□□□□□ -0.12
ERBB2-215ENST00000583391 NXF3Q9H4D5 531 aaKnown RBP14.28□□□□□ -0.12
ERBB2-215ENST00000583391 KIAA1468Q9P260 1216 aa14.28□□□□□ -0.12
ERBB2-215ENST00000583391 EXOC7Q9UPT5 735 aa14.28□□□□□ -0.12
ERBB2-215ENST00000583391 MAPK8IP1Q9UQF2 711 aa14.28□□□□□ -0.12
ERBB2-215ENST00000583391 TNFSF13BQ9Y275 285 aa14.28□□□□□ -0.12
ERBB2-215ENST00000583391 CHD9Q3L8U1 2897 aa14.28□□□□□ -0.12
ERBB2-215ENST00000583391 A0A0U1RQF3 1178 aa14.27□□□□□ -0.13
ERBB2-215ENST00000583391 ANKRD63C9JTQ0 380 aa14.27□□□□□ -0.13
ERBB2-215ENST00000583391 TOM1L1O75674 476 aa14.27□□□□□ -0.13
ERBB2-215ENST00000583391 ATF7P17544 494 aaPredicted RBP14.27□□□□□ -0.13
ERBB2-215ENST00000583391 PROZP22891 400 aa14.27□□□□□ -0.13
ERBB2-215ENST00000583391 HOXD13P35453 343 aa14.27□□□□□ -0.13
ERBB2-215ENST00000583391 NFKBIBQ15653 356 aa14.27□□□□□ -0.13
ERBB2-215ENST00000583391 BMT2Q1RMZ1 405 aa14.27□□□□□ -0.13
ERBB2-215ENST00000583391 CCDC183Q5T5S1 534 aa14.27□□□□□ -0.13
ERBB2-215ENST00000583391 ZNF658Q5TYW1 1059 aaPredicted RBP14.27□□□□□ -0.13
ERBB2-215ENST00000583391 CAVIN1Q6NZI2 390 aaKnown RBP14.27□□□□□ -0.13
ERBB2-215ENST00000583391 ECHDC2Q86YB7 292 aa14.27□□□□□ -0.13
ERBB2-215ENST00000583391 ZNF507Q8TCN5 953 aa14.27□□□□□ -0.13
ERBB2-215ENST00000583391 LPPQ93052 612 aa14.27□□□□□ -0.13
ERBB2-215ENST00000583391 TCHPQ9BT92 498 aa14.27□□□□□ -0.13
ERBB2-215ENST00000583391 CDT1Q9H211 546 aa14.27□□□□□ -0.13
ERBB2-215ENST00000583391 TMEM206Q9H813 350 aa14.27□□□□□ -0.13
ERBB2-215ENST00000583391 TMEM63CQ9P1W3 806 aa14.27□□□□□ -0.13
ERBB2-215ENST00000583391 LRFN2Q9ULH4 789 aa14.27□□□□□ -0.13
ERBB2-215ENST00000583391 HES2Q9Y543 173 aa14.27□□□□□ -0.13
ERBB2-215ENST00000583391 IPPQ9Y573 584 aa14.27□□□□□ -0.13
ERBB2-215ENST00000583391 PCDHB2Q9Y5E7 798 aa14.27□□□□□ -0.13
ERBB2-215ENST00000583391 MYO9BQ13459 2157 aa14.27□□□□□ -0.13
ERBB2-215ENST00000583391 MEIS3P2A8K0S8 358 aa14.26□□□□□ -0.13
ERBB2-215ENST00000583391 ABLIM1O14639 778 aa14.26□□□□□ -0.13
ERBB2-215ENST00000583391 ATP2A2P16615 1042 aaKnown RBP14.26□□□□□ -0.13
ERBB2-215ENST00000583391 KLHL40Q2TBA0 621 aa14.26□□□□□ -0.13
ERBB2-215ENST00000583391 FAM109BQ6ICB4 259 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms