RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 NCLP19338 710 aaKnown RBP13.76□□□□□ -0.21
TOP3A-215ENST00000583328 HOXA11P31270 313 aaPredicted RBP13.76□□□□□ -0.21
TOP3A-215ENST00000583328 STARD6P59095 220 aa13.76□□□□□ -0.21
TOP3A-215ENST00000583328 PSMC5P62195 406 aa13.76□□□□□ -0.21
TOP3A-215ENST00000583328 DSG1Q02413 1049 aa13.76□□□□□ -0.21
TOP3A-215ENST00000583328 HTR4Q13639 388 aa13.76□□□□□ -0.21
TOP3A-215ENST00000583328 Q4G0T1 1027 aa13.76□□□□□ -0.21
TOP3A-215ENST00000583328 PLA2G4FQ68DD2 849 aa13.76□□□□□ -0.21
TOP3A-215ENST00000583328 POTEGQ6S5H5 508 aa13.76□□□□□ -0.21
TOP3A-215ENST00000583328 SUMF1Q8NBK3 374 aa13.76□□□□□ -0.21
TOP3A-215ENST00000583328 CNNM3Q8NE01 707 aa13.76□□□□□ -0.21
TOP3A-215ENST00000583328 TBCKQ8TEA7 893 aa13.76□□□□□ -0.21
TOP3A-215ENST00000583328 COLEC11Q9BWP8 271 aa13.76□□□□□ -0.21
TOP3A-215ENST00000583328 PRKD2Q9BZL6 878 aa13.76□□□□□ -0.21
TOP3A-215ENST00000583328 ZDHHC7Q9NXF8 308 aa13.76□□□□□ -0.21
TOP3A-215ENST00000583328 NCDNQ9UBB6 729 aa13.76□□□□□ -0.21
TOP3A-215ENST00000583328 CACNA1BQ00975 2339 aa13.76□□□□□ -0.21
TOP3A-215ENST00000583328 DENND4AQ7Z401 1863 aa13.76□□□□□ -0.21
TOP3A-215ENST00000583328 OTOGLQ3ZCN5 2332 aa13.75□□□□□ -0.21
TOP3A-215ENST00000583328 LAMTOR5O43504 91 aa13.75□□□□□ -0.21
TOP3A-215ENST00000583328 TGM5O43548 720 aa13.75□□□□□ -0.21
TOP3A-215ENST00000583328 SDHBP21912 280 aa13.75□□□□□ -0.21
TOP3A-215ENST00000583328 NLRP5P59047 1200 aa13.75□□□□□ -0.21
TOP3A-215ENST00000583328 GPC5P78333 572 aa13.75□□□□□ -0.21
TOP3A-215ENST00000583328 KRT32Q14532 448 aa13.75□□□□□ -0.21
TOP3A-215ENST00000583328 TSGA10IPQ3SY00 556 aa13.75□□□□□ -0.21
TOP3A-215ENST00000583328 VARS2Q5ST30 1063 aaKnown RBP13.75□□□□□ -0.21
TOP3A-215ENST00000583328 ANO5Q75V66 913 aa13.75□□□□□ -0.21
TOP3A-215ENST00000583328 GLYCTKQ8IVS8 523 aa13.75□□□□□ -0.21
TOP3A-215ENST00000583328 EXOC8Q8IYI6 725 aa13.75□□□□□ -0.21
TOP3A-215ENST00000583328 RNF168Q8IYW5 571 aaPredicted RBP13.75□□□□□ -0.21
TOP3A-215ENST00000583328 RASEFQ8IZ41 740 aa13.75□□□□□ -0.21
TOP3A-215ENST00000583328 MAML2Q8IZL2 1156 aaPredicted RBP13.75□□□□□ -0.21
TOP3A-215ENST00000583328 PRPF31Q8WWY3 499 aaKnown RBP13.75□□□□□ -0.21
TOP3A-215ENST00000583328 PSPC1Q8WXF1 523 aaKnown RBP13.75□□□□□ -0.21
TOP3A-215ENST00000583328 SLC7A3Q8WY07 619 aa13.75□□□□□ -0.21
TOP3A-215ENST00000583328 TMEM143Q96AN5 459 aa13.75□□□□□ -0.21
TOP3A-215ENST00000583328 BORCS6Q96GS4 357 aa13.75□□□□□ -0.21
TOP3A-215ENST00000583328 GAD1Q99259 594 aa13.75□□□□□ -0.21
TOP3A-215ENST00000583328 RPP25Q9BUL9 199 aaKnown RBP13.75□□□□□ -0.21
TOP3A-215ENST00000583328 BCO2Q9BYV7 579 aa13.75□□□□□ -0.21
TOP3A-215ENST00000583328 MINDY3Q9H8M7 445 aa13.75□□□□□ -0.21
TOP3A-215ENST00000583328 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.75□□□□□ -0.21
TOP3A-215ENST00000583328 SPATA6Q9NWH7 488 aaPredicted RBP13.75□□□□□ -0.21
TOP3A-215ENST00000583328 VPS54Q9P1Q0 977 aa13.75□□□□□ -0.21
TOP3A-215ENST00000583328 GPR179Q6PRD1 2367 aa13.74□□□□□ -0.21
TOP3A-215ENST00000583328 ZNF292O60281 2723 aa13.74□□□□□ -0.21
TOP3A-215ENST00000583328 KANSL1LA0AUZ9 987 aa13.74□□□□□ -0.21
TOP3A-215ENST00000583328 ARL5CA6NH57 179 aa13.74□□□□□ -0.21
TOP3A-215ENST00000583328 PAPLNO95428 1278 aa13.74□□□□□ -0.21
TOP3A-215ENST00000583328 C1RP00736 705 aa13.74□□□□□ -0.21
TOP3A-215ENST00000583328 HMGB1P09429 215 aaKnown RBP13.74□□□□□ -0.21
TOP3A-215ENST00000583328 FSHRP23945 695 aa13.74□□□□□ -0.21
TOP3A-215ENST00000583328 NPEPPSP55786 919 aa13.74□□□□□ -0.21
TOP3A-215ENST00000583328 CSTF1Q05048 431 aaKnown RBP13.74□□□□□ -0.21
TOP3A-215ENST00000583328 SNW1Q13573 536 aaKnown RBP13.74□□□□□ -0.21
TOP3A-215ENST00000583328 B3GNT9Q6UX72 402 aa13.74□□□□□ -0.21
TOP3A-215ENST00000583328 GPR161Q8N6U8 529 aaKnown RBP13.74□□□□□ -0.21
TOP3A-215ENST00000583328 SMG8Q8ND04 991 aaKnown RBP13.74□□□□□ -0.21
TOP3A-215ENST00000583328 ATRIPQ8WXE1 791 aa13.74□□□□□ -0.21
TOP3A-215ENST00000583328 SECISBP2LQ93073 1101 aaKnown RBP13.74□□□□□ -0.21
TOP3A-215ENST00000583328 CEP170P1Q96L14 293 aa13.74□□□□□ -0.21
TOP3A-215ENST00000583328 SLC26A6Q9BXS9 759 aa13.74□□□□□ -0.21
TOP3A-215ENST00000583328 C22orf23Q9BZE7 217 aa13.74□□□□□ -0.21
TOP3A-215ENST00000583328 RNF39Q9H2S5 420 aa13.74□□□□□ -0.21
TOP3A-215ENST00000583328 CHST7Q9NS84 486 aa13.74□□□□□ -0.21
TOP3A-215ENST00000583328 MIOSQ9NXC5 875 aa13.74□□□□□ -0.21
TOP3A-215ENST00000583328 IPPQ9Y573 584 aa13.74□□□□□ -0.21
TOP3A-215ENST00000583328 ZFP37Q9Y6Q3 630 aaPredicted RBP13.74□□□□□ -0.21
TOP3A-215ENST00000583328 CEP250Q9BV73 2442 aa13.74□□□□□ -0.21
TOP3A-215ENST00000583328 TPRP12270 2363 aaKnown RBP13.74□□□□□ -0.21
TOP3A-215ENST00000583328 F8W810 466 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 SPTLC1O15269 473 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 DKC1O60832 514 aaKnown RBP eCLIP13.73□□□□□ -0.21
TOP3A-215ENST00000583328 ZMYND10O75800 440 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 ERLIN2O94905 339 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 TDP2O95551 362 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 EFEMP2O95967 443 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 MLH1P40692 756 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 SCNN1GP51170 649 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 ATXN1P54253 815 aaKnown RBP13.73□□□□□ -0.21
TOP3A-215ENST00000583328 DSC1Q08554 894 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 NCBP1Q09161 790 aaKnown RBP13.73□□□□□ -0.21
TOP3A-215ENST00000583328 LAMTOR4Q0VGL1 99 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 UBXN2BQ14CS0 331 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 USP41Q3LFD5 358 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 ZNF528Q3MIS6 628 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 SLC44A4Q53GD3 710 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 FUT10Q6P4F1 479 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 LILRA6Q6PI73 481 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 PARM1Q6UWI2 310 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 Q6ZUG5 572 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 GRASPQ7Z6J2 395 aaPredicted RBP13.73□□□□□ -0.21
TOP3A-215ENST00000583328 RNF149Q8NC42 400 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 BRF1Q92994 677 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 B3GALT6Q96L58 329 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 APOL6Q9BWW8 343 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 EIF2AQ9BY44 585 aaKnown RBP13.73□□□□□ -0.21
TOP3A-215ENST00000583328 RNF26Q9BY78 433 aaPredicted RBP13.73□□□□□ -0.21
TOP3A-215ENST00000583328 GPR62Q9BZJ7 368 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms