RNA–Protein interactions for RNA: ENST00000583289.5

PTPRM-215, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-215ENST00000583289 ZSCAN16Q9H4T2 348 aaPredicted RBP5.29□□□□□ -1.56
PTPRM-215ENST00000583289 PRDM11Q9NQV5 511 aa5.29□□□□□ -1.56
PTPRM-215ENST00000583289 PPP4R1LQ9P1A2 415 aa5.29□□□□□ -1.56
PTPRM-215ENST00000583289 CFAP45Q9UL16 551 aa5.29□□□□□ -1.56
PTPRM-215ENST00000583289 RBM8AQ9Y5S9 174 aaKnown RBP5.29□□□□□ -1.56
PTPRM-215ENST00000583289 USP16Q9Y5T5 823 aa5.29□□□□□ -1.56
PTPRM-215ENST00000583289 FPGT-TNNI3KV9GXZ4 949 aa5.29□□□□□ -1.56
PTPRM-215ENST00000583289 COL18A1P39060 1754 aa5.29□□□□□ -1.56
PTPRM-215ENST00000583289 RGPD5Q99666 1765 aa5.29□□□□□ -1.56
PTPRM-215ENST00000583289 ABCC12Q96J65 1359 aa5.29□□□□□ -1.56
PTPRM-215ENST00000583289 TRAV20A0A0B4J274 112 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 GOLGA6L4A6NEF3 574 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 MATN3O15232 486 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 DHX16O60231 1041 aaKnown RBP5.28□□□□□ -1.56
PTPRM-215ENST00000583289 ANXA1P04083 346 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 GNAT1P11488 350 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 PABPC1P11940 636 aaKnown RBP5.28□□□□□ -1.56
PTPRM-215ENST00000583289 SYT1P21579 422 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 RFX5P48382 616 aaPredicted RBP5.28□□□□□ -1.56
PTPRM-215ENST00000583289 GPR85P60893 370 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 KRT85P78386 507 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 HMGN5P82970 282 aaKnown RBP5.28□□□□□ -1.56
PTPRM-215ENST00000583289 GRIN1Q05586 938 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 SLC39A6Q13433 755 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 CCDC158Q5M9N0 1113 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 CCDC183Q5T5S1 534 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 TSHZ3Q63HK5 1081 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 SLFN13Q68D06 897 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 STYK1Q6J9G0 422 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 ZSCAN25Q6NSZ9 544 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 NSMFQ6X4W1 530 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 UBE3BQ7Z3V4 1068 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 CIR1Q86X95 450 aaPredicted RBP5.28□□□□□ -1.56
PTPRM-215ENST00000583289 PROSER1Q86XN7 944 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 IFNL3Q8IZI9 196 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 KBTBD3Q8NAB2 608 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 IGDCC4Q8TDY8 1250 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 KAZALD1Q96I82 304 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 NEK1Q96PY6 1258 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 CDK5RAP1Q96SZ6 601 aaKnown RBP5.28□□□□□ -1.56
PTPRM-215ENST00000583289 CCDC8Q9H0W5 538 aaPredicted RBP5.28□□□□□ -1.56
PTPRM-215ENST00000583289 BOLA2Q9H3K6 86 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 TSPY26PQ9H489 355 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 JADE2Q9NQC1 790 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 ARHGEF4Q9NR80 690 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 PPARGC1AQ9UBK2 798 aaKnown RBP5.28□□□□□ -1.56
PTPRM-215ENST00000583289 ST6GALNAC2Q9UJ37 374 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 ADAM29Q9UKF5 820 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 WASF3Q9UPY6 502 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 KDM6AO15550 1401 aaPredicted RBP5.28□□□□□ -1.56
PTPRM-215ENST00000583289 PKD1L3Q7Z443 1732 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 PARP4Q9UKK3 1724 aaKnown RBP5.28□□□□□ -1.56
PTPRM-215ENST00000583289 CRYBG1Q9Y4K1 1723 aa5.28□□□□□ -1.56
PTPRM-215ENST00000583289 ELP1O95163 1332 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 PXDNQ92626 1479 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 FAM47E-STBD1D6RA91 191 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 EYA2O00167 538 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 TAF5LO75529 589 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 FBXO21O94952 628 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 MAP4K4O95819 1239 aaPredicted RBP5.27□□□□□ -1.57
PTPRM-215ENST00000583289 ENO2P09104 434 aaPredicted RBP5.27□□□□□ -1.57
PTPRM-215ENST00000583289 COL6A1P12109 1028 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 FAHP16930 419 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 RPS6KB1P23443 525 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 GJB2P29033 226 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 ZXDAP98168 799 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 TFCP2Q12800 502 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 IFRD2Q12894 506 aaPredicted RBP5.27□□□□□ -1.57
PTPRM-215ENST00000583289 TUSC3Q13454 348 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 TCIRG1Q13488 830 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 TTF1Q15361 905 aaPredicted RBP5.27□□□□□ -1.57
PTPRM-215ENST00000583289 SMAD2Q15796 467 aaKnown RBP5.27□□□□□ -1.57
PTPRM-215ENST00000583289 CCDC57Q2TAC2 916 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 PAN2Q504Q3 1202 aaKnown RBP5.27□□□□□ -1.57
PTPRM-215ENST00000583289 LMBR1LQ6UX01 489 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 KIF6Q6ZMV9 814 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 BRINP3Q76B58 766 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 LRP10Q7Z4F1 713 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.27□□□□□ -1.57
PTPRM-215ENST00000583289 GAS2L3Q86XJ1 694 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 FBXL16Q8N461 479 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 GPT2Q8TD30 523 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 CLEC4DQ8WXI8 215 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 OSBP2Q969R2 916 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 PDLIM2Q96JY6 352 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 ALG1Q9BT22 464 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 PLA2G12BQ9BX93 195 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.27□□□□□ -1.57
PTPRM-215ENST00000583289 TMOD3Q9NYL9 352 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 DSEQ9UL01 958 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 PA2G4Q9UQ80 394 aaKnown RBP5.27□□□□□ -1.57
PTPRM-215ENST00000583289 TSC22D4Q9Y3Q8 395 aa5.27□□□□□ -1.57
PTPRM-215ENST00000583289 SH3TC1Q8TE82 1336 aa5.26□□□□□ -1.57
PTPRM-215ENST00000583289 SPEF2Q9C093 1822 aa5.26□□□□□ -1.57
PTPRM-215ENST00000583289 GOLGA6L6A8MZA4 724 aa5.26□□□□□ -1.57
PTPRM-215ENST00000583289 CTAGE5O15320 804 aa5.26□□□□□ -1.57
PTPRM-215ENST00000583289 RNF113AO15541 343 aaKnown RBP5.26□□□□□ -1.57
PTPRM-215ENST00000583289 KLHL18O94889 574 aa5.26□□□□□ -1.57
PTPRM-215ENST00000583289 SOD2P04179 222 aa5.26□□□□□ -1.57
PTPRM-215ENST00000583289 PCCAP05165 728 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms