RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 CTNND1O60716 968 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 ZBED4O75132 1171 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 STBD1O95210 358 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 KCNA2P16389 499 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 HPDP32754 393 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 ACTN2P35609 894 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 MAATS1Q7Z4T9 603 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 CDR2LQ86X02 465 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 TXLNBQ8N3L3 684 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 SCFD2Q8WU76 684 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 LUC7LQ9NQ29 371 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 KMT5AQ9NQR1 393 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 TMEM59LQ9UK28 342 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PLAAQ9Y263 795 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 UMODL1Q5DID0 1318 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 WDR64B1ANS9 1081 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PGRMC1O00264 195 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PLA2G6O60733 806 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 ATP4AP20648 1035 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 KCNJ1P48048 391 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PSMC5P62195 406 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 GUCY1A3Q02108 690 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PRKCEQ02156 737 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 SF3B2Q13435 895 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 TNIP1Q15025 636 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 FKBP1CQ5VVH2 108 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 NLRX1Q86UT6 975 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 TRIM50Q86XT4 487 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 IFT20Q8IY31 132 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 REPS2Q8NFH8 660 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 EPS8L1Q8TE68 723 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 ZNF516Q92618 1163 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 BICD1Q96G01 975 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 HES6Q96HZ4 224 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 MED4Q9NPJ6 270 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 BCCIPQ9P287 314 aaKnown RBP eCLIP11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 SEL1LQ9UBV2 794 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PTPN22Q9Y2R2 807 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 RLFQ13129 1914 aa11.55□□□□□ -0.56
CDK5RAP3-225ENST00000582482 GTPBP10A4D1E9 387 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 SMIM23A6NLE4 172 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 HNRNPDLO14979 420 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 SLC26A4O43511 780 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 ZEB2O60315 1214 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 GJB1P08034 283 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 BCRP11274 1271 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 KRT5P13647 590 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 MARK3P27448 753 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 BAG6P46379 1132 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 ZNF280AP59817 542 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 GTF2BQ00403 316 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PPATQ06203 517 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 SLFN11Q7Z7L1 901 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PRUNE1Q86TP1 453 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 VPS36Q86VN1 386 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 MCF2L2Q86YR7 1114 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 ZNF280CQ8ND82 737 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PPP1R13LQ8WUF5 828 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 RFFLQ8WZ73 363 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 RNPC3Q96LT9 517 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.54□□□□□ -0.561e-20■■□□□ 12.4
CDK5RAP3-225ENST00000582482 FAM107BQ9H098 131 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 VIPAS39Q9H9C1 493 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 ANKFY1Q9P2R3 1169 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 ALG6Q9Y672 507 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 FOXO6A8MYZ6 492 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 COMTP21964 271 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 NLRP11P59045 1033 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 ACTR2P61160 394 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 GNGT1P63211 74 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 FMO1Q01740 532 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 NNTQ13423 1086 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 TTC27Q6P3X3 843 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 VSIG10LQ86VR7 867 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 FAM76AQ8TAV0 307 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 ASAP3Q8TDY4 903 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 CPA5Q8WXQ8 436 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 LPAR1Q92633 364 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PPP1R16BQ96T49 567 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 HERPUD2Q9BSE4 406 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 MKNK1Q9BUB5 465 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 MOV10L1Q9BXT6 1211 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 POLR3FQ9H1D9 316 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PICK1Q9NRD5 415 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 DNAJC17Q9NVM6 304 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 CYP39A1Q9NYL5 469 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 NOCTQ9UK39 431 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 FBXL5Q9UKA1 691 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 AMFRQ9UKV5 643 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 SYNPO2Q9UMS6 1093 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 BZW2Q9Y6E2 419 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 SSC5DA1L4H1 1573 aa11.54□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PARP14Q460N5 1801 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 HSF2BPO75031 334 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 HSD17B3P37058 310 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 NCKAP1LP55160 1127 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 KIF22Q14807 665 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 CEP85LQ5SZL2 805 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 CFAP58Q5T655 872 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 SV2AQ7L0J3 742 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms