RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 DDX12PQ92771 950 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 P2RX5Q93086 422 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 DHX58Q96C10 678 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 DNAJC19Q96DA6 116 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 CCDC34Q96HJ3 373 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 NLRP4Q96MN2 994 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 GBP4Q96PP9 640 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 UHRF1Q96T88 793 aaPredicted RBP10.9□□□□□ -0.66
GGA3-209ENST00000580646 REEP2Q9BRK0 252 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 TRAIPQ9BWF2 469 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 NSUN3Q9H649 340 aaKnown RBP10.9□□□□□ -0.66
GGA3-209ENST00000580646 TMEM134Q9H6X4 195 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 PARVGQ9HBI0 331 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 ALG13Q9NP73 1137 aaKnown RBP10.9□□□□□ -0.66
GGA3-209ENST00000580646 CHST12Q9NRB3 414 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 SEL1LQ9UBV2 794 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 PLAGL2Q9UPG8 496 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 FNDC1Q4ZHG4 1894 aaPredicted RBP10.89□□□□□ -0.67
GGA3-209ENST00000580646 COL4A4P53420 1690 aaPredicted RBP10.89□□□□□ -0.67
GGA3-209ENST00000580646 A0A0U1RQF3 1178 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 MYMKA6NI61 221 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 HOXA2O43364 376 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 TBCAO75347 108 aaKnown RBP10.89□□□□□ -0.67
GGA3-209ENST00000580646 ITGB1P05556 798 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 KRT18P05783 430 aaKnown RBP10.89□□□□□ -0.67
GGA3-209ENST00000580646 SRGAP2CP0DJJ0 459 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 FGFR1P11362 822 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 GAP43P17677 238 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 AXLP30530 894 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 SMTNP53814 917 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 NCKAP1LP55160 1127 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 UBE2HP62256 183 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 FAM160A1Q05DH4 1040 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 SPOUT1Q5T280 376 aaKnown RBP10.89□□□□□ -0.67
GGA3-209ENST00000580646 KANK3Q6NY19 840 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 MAEAQ7L5Y9 396 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 ECHDC2Q86YB7 292 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 ELOA2Q8IYF1 753 aaPredicted RBP10.89□□□□□ -0.67
GGA3-209ENST00000580646 FMR1NBQ8N0W7 255 aaPredicted RBP10.89□□□□□ -0.67
GGA3-209ENST00000580646 ENGASEQ8NFI3 743 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 SPPL3Q8TCT6 385 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 BSNDQ8WZ55 320 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 TIGD1Q96MW7 591 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 C7orf25Q9BPX7 421 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 PANK2Q9BZ23 570 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 TRIM9Q9C026 710 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 TMEM117Q9H0C3 514 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 FZD8Q9H461 694 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 ST6GALNAC4Q9H4F1 302 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 AAASQ9NRG9 546 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 OLFML3Q9NRN5 406 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 AGPAT5Q9NUQ2 364 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 TYW1Q9NV66 732 aaKnown RBP10.89□□□□□ -0.67
GGA3-209ENST00000580646 PRMT7Q9NVM4 692 aaPredicted RBP10.89□□□□□ -0.67
GGA3-209ENST00000580646 DACT1Q9NYF0 836 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 ARHGAP28Q9P2N2 729 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 PCDHB12Q9Y5F1 795 aa10.89□□□□□ -0.67
GGA3-209ENST00000580646 PVALEFA0A1B0GWK0 134 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 LRRIQ4A6NIV6 560 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 CITO14578 2027 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 FAM13AO94988 1023 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 ZNF202O95125 648 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 EOMESO95936 686 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 KCNA5P22460 613 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 DNAJB1P25685 340 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 NPTX2P47972 431 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 PEX3P56589 373 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 MBTD1Q05BQ5 628 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 SNW1Q13573 536 aaKnown RBP10.88□□□□□ -0.67
GGA3-209ENST00000580646 CAMK1Q14012 370 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 DHX8Q14562 1220 aaKnown RBP10.88□□□□□ -0.67
GGA3-209ENST00000580646 RALGAPA2Q2PPJ7 1873 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 KRBA2Q6ZNG9 492 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 CATSPER4Q7RTX7 472 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 RNF169Q8NCN4 708 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 DEPTORQ8TB45 409 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 POF1BQ8WVV4 589 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 HVCN1Q96D96 273 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 PABPC5Q96DU9 382 aaKnown RBP10.88□□□□□ -0.67
GGA3-209ENST00000580646 CCDC51Q96ER9 411 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 NECAB3Q96P71 396 aaPredicted RBP10.88□□□□□ -0.67
GGA3-209ENST00000580646 CASD1Q96PB1 797 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 CCDC113Q9H0I3 377 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 GOLPH3LQ9H4A5 285 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 MINDY3Q9H8M7 445 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 KMT5AQ9NQR1 393 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 RNF19AQ9NV58 838 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 SERTAD1Q9UHV2 236 aa10.88□□□□□ -0.67
GGA3-209ENST00000580646 CNTNAP2Q9UHC6 1331 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 NLRC5Q86WI3 1866 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 NPHP3-ACAD11A0A0J9YXS1 232 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 INO80B-WBP1J3KQ70 363 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 ACKR2O00590 384 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 NCK2O43639 380 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 TRAK2O60296 914 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 ERLIN2O94905 339 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 CSPG5O95196 566 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 SKIP12755 728 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 NCBP1Q09161 790 aaKnown RBP10.87□□□□□ -0.67
GGA3-209ENST00000580646 COL19A1Q14993 1142 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms