RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 TMEM174Q8WUU8 243 aa15.17■□□□□ 0.02
TSEN54-206ENST00000579449 POMGNT1Q8WZA1 660 aa15.17■□□□□ 0.02
TSEN54-206ENST00000579449 HSPBP1Q9NZL4 362 aa15.17■□□□□ 0.02
TSEN54-206ENST00000579449 LIMA1Q9UHB6 759 aaKnown RBP15.17■□□□□ 0.02
TSEN54-206ENST00000579449 STYXL1Q9Y6J8 313 aa15.17■□□□□ 0.02
TSEN54-206ENST00000579449 AKAP3O75969 853 aa15.16■□□□□ 0.02
TSEN54-206ENST00000579449 GNA14O95837 355 aa15.16■□□□□ 0.02
TSEN54-206ENST00000579449 SERPINC1P01008 464 aa15.16■□□□□ 0.02
TSEN54-206ENST00000579449 CHRNA1P02708 482 aa15.16■□□□□ 0.02
TSEN54-206ENST00000579449 CTSHP09668 335 aa15.16■□□□□ 0.02
TSEN54-206ENST00000579449 EPB41P11171 864 aaKnown RBP15.16■□□□□ 0.02
TSEN54-206ENST00000579449 COL6A1P12109 1028 aa15.16■□□□□ 0.02
TSEN54-206ENST00000579449 EIF4BP23588 611 aaKnown RBP15.16■□□□□ 0.02
TSEN54-206ENST00000579449 EEF1GP26641 437 aaKnown RBP15.16■□□□□ 0.02
TSEN54-206ENST00000579449 MATR3P43243 847 aaKnown RBP eCLIP15.16■□□□□ 0.02
TSEN54-206ENST00000579449 ATN1P54259 1190 aaPredicted RBP15.16■□□□□ 0.02
TSEN54-206ENST00000579449 KRT31Q15323 416 aa15.16■□□□□ 0.02
TSEN54-206ENST00000579449 TMEM132AQ24JP5 1023 aa15.16■□□□□ 0.02
TSEN54-206ENST00000579449 CCDC40Q4G0X9 1142 aa15.16■□□□□ 0.02
TSEN54-206ENST00000579449 ATF7IP2Q5U623 682 aa15.16■□□□□ 0.02
TSEN54-206ENST00000579449 SLFN12LQ6IEE8 588 aa15.16■□□□□ 0.02
TSEN54-206ENST00000579449 FAM126BQ8IXS8 530 aa15.16■□□□□ 0.02
TSEN54-206ENST00000579449 ZSWIM2Q8NEG5 633 aa15.16■□□□□ 0.02
TSEN54-206ENST00000579449 TMEM40Q8WWA1 233 aa15.16■□□□□ 0.02
TSEN54-206ENST00000579449 PRIMPOLQ96LW4 560 aa15.16■□□□□ 0.02
TSEN54-206ENST00000579449 HAPLN2Q9GZV7 340 aa15.16■□□□□ 0.02
TSEN54-206ENST00000579449 IFNKQ9P0W0 207 aa15.16■□□□□ 0.02
TSEN54-206ENST00000579449 BRCA2P51587 3418 aa15.16■□□□□ 0.02
TSEN54-206ENST00000579449 CNTNAP2Q9UHC6 1331 aa15.16■□□□□ 0.02
TSEN54-206ENST00000579449 GOLGA8IPA6NC78 632 aa15.15■□□□□ 0.02
TSEN54-206ENST00000579449 GOLGA8JA6NMD2 632 aa15.15■□□□□ 0.02
TSEN54-206ENST00000579449 SLC16A3O15427 465 aaKnown RBP15.15■□□□□ 0.02
TSEN54-206ENST00000579449 TSPAN1O60635 241 aa15.15■□□□□ 0.02
TSEN54-206ENST00000579449 EXOC3O60645 756 aa15.15■□□□□ 0.02
TSEN54-206ENST00000579449 TOM1L1O75674 476 aa15.15■□□□□ 0.02
TSEN54-206ENST00000579449 ERLIN2O94905 339 aa15.15■□□□□ 0.02
TSEN54-206ENST00000579449 CD4P01730 458 aa15.15■□□□□ 0.02
TSEN54-206ENST00000579449 CAPN2P17655 700 aa15.15■□□□□ 0.02
TSEN54-206ENST00000579449 ARF4P18085 180 aaPredicted RBP15.15■□□□□ 0.02
TSEN54-206ENST00000579449 PSMC2P35998 433 aaKnown RBP15.15■□□□□ 0.02
TSEN54-206ENST00000579449 MTIF2P46199 727 aaKnown RBP15.15■□□□□ 0.02
TSEN54-206ENST00000579449 FAM26DQ5JW98 314 aa15.15■□□□□ 0.02
TSEN54-206ENST00000579449 TSHZ1Q6ZSZ6 1077 aa15.15■□□□□ 0.02
TSEN54-206ENST00000579449 CATSPER4Q7RTX7 472 aa15.15■□□□□ 0.02
TSEN54-206ENST00000579449 APTXQ7Z2E3 356 aaKnown RBP15.15■□□□□ 0.02
TSEN54-206ENST00000579449 FAM186BQ8IYM0 893 aa15.15■□□□□ 0.02
TSEN54-206ENST00000579449 XXYLT1Q8NBI6 393 aa15.15■□□□□ 0.02
TSEN54-206ENST00000579449 ANKRD20A12PQ8NF67 263 aa15.15■□□□□ 0.02
TSEN54-206ENST00000579449 SAAL1Q96ER3 474 aa15.15■□□□□ 0.02
TSEN54-206ENST00000579449 CPB2Q96IY4 423 aa15.15■□□□□ 0.02
TSEN54-206ENST00000579449 MKNK1Q9BUB5 465 aa15.15■□□□□ 0.02
TSEN54-206ENST00000579449 TRIM5Q9C035 493 aa15.15■□□□□ 0.02
TSEN54-206ENST00000579449 TAB2Q9NYJ8 693 aa15.15■□□□□ 0.02
TSEN54-206ENST00000579449 ANKFY1Q9P2R3 1169 aa15.15■□□□□ 0.02
TSEN54-206ENST00000579449 TNFSF13BQ9Y275 285 aa15.15■□□□□ 0.02
TSEN54-206ENST00000579449 FRMD4BQ9Y2L6 1034 aa15.15■□□□□ 0.02
TSEN54-206ENST00000579449 MROH7Q68CQ1 1323 aa15.15■□□□□ 0.02
TSEN54-206ENST00000579449 A0A0B4J269 797 aa15.14■□□□□ 0.01
TSEN54-206ENST00000579449 ABLIM1O14639 778 aa15.14■□□□□ 0.01
TSEN54-206ENST00000579449 TLR3O15455 904 aaKnown RBP15.14■□□□□ 0.01
TSEN54-206ENST00000579449 CLDN3O15551 220 aa15.14■□□□□ 0.01
TSEN54-206ENST00000579449 CAND2O75155 1236 aa15.14■□□□□ 0.01
TSEN54-206ENST00000579449 CKBP12277 381 aa15.14■□□□□ 0.01
TSEN54-206ENST00000579449 PROZP22891 400 aa15.14■□□□□ 0.01
TSEN54-206ENST00000579449 SFPQP23246 707 aaKnown RBP eCLIP15.14■□□□□ 0.01
TSEN54-206ENST00000579449 COPB1P53618 953 aaKnown RBP15.14■□□□□ 0.01
TSEN54-206ENST00000579449 MARSP56192 900 aaKnown RBP15.14■□□□□ 0.01
TSEN54-206ENST00000579449 UBASH3AP57075 661 aa15.14■□□□□ 0.01
TSEN54-206ENST00000579449 PCBP1Q15365 356 aaKnown RBP eCLIP15.14■□□□□ 0.01
TSEN54-206ENST00000579449 ZNF618Q5T7W0 954 aa15.14■□□□□ 0.01
TSEN54-206ENST00000579449 EEF1DP3Q658K8 133 aa15.14■□□□□ 0.01
TSEN54-206ENST00000579449 MPZL3Q6UWV2 235 aa15.14■□□□□ 0.01
TSEN54-206ENST00000579449 FRMD5Q7Z6J6 570 aa15.14■□□□□ 0.01
TSEN54-206ENST00000579449 ZBTB33Q86T24 672 aa15.14■□□□□ 0.01
TSEN54-206ENST00000579449 CDR2LQ86X02 465 aaPredicted RBP15.14■□□□□ 0.01
TSEN54-206ENST00000579449 RDH13Q8NBN7 331 aa15.14■□□□□ 0.01
TSEN54-206ENST00000579449 PAWRQ96IZ0 340 aaKnown RBP15.14■□□□□ 0.01
TSEN54-206ENST00000579449 NAP1L5Q96NT1 182 aaPredicted RBP15.14■□□□□ 0.01
TSEN54-206ENST00000579449 TUBGCP2Q9BSJ2 902 aa15.14■□□□□ 0.01
TSEN54-206ENST00000579449 TCHPQ9BT92 498 aa15.14■□□□□ 0.01
TSEN54-206ENST00000579449 MSTO1Q9BUK6 570 aa15.14■□□□□ 0.01
TSEN54-206ENST00000579449 VPS16Q9H269 839 aa15.14■□□□□ 0.01
TSEN54-206ENST00000579449 PDZD7Q9H5P4 517 aa15.14■□□□□ 0.01
TSEN54-206ENST00000579449 C11orf49Q9H6J7 331 aa15.14■□□□□ 0.01
TSEN54-206ENST00000579449 PTPRHQ9HD43 1115 aa15.14■□□□□ 0.01
TSEN54-206ENST00000579449 AGO2Q9UKV8 859 aaKnown RBP15.14■□□□□ 0.01
TSEN54-206ENST00000579449 NOC2LQ9Y3T9 749 aaKnown RBP15.14■□□□□ 0.01
TSEN54-206ENST00000579449 LRRC10BA6NIK2 292 aa15.13■□□□□ 0.01
TSEN54-206ENST00000579449 RBAK-RBAKDNI3L0D1 243 aa15.13■□□□□ 0.01
TSEN54-206ENST00000579449 N4BP3O15049 544 aa15.13■□□□□ 0.01
TSEN54-206ENST00000579449 KIAA0391O15091 583 aaKnown RBP15.13■□□□□ 0.01
TSEN54-206ENST00000579449 PQBP1O60828 265 aaKnown RBP15.13■□□□□ 0.01
TSEN54-206ENST00000579449 ADCY5O95622 1261 aa15.13■□□□□ 0.01
TSEN54-206ENST00000579449 HARSP12081 509 aaKnown RBP15.13■□□□□ 0.01
TSEN54-206ENST00000579449 ZNF75DP51815 510 aa15.13■□□□□ 0.01
TSEN54-206ENST00000579449 MCL1Q07820 350 aa15.13■□□□□ 0.01
TSEN54-206ENST00000579449 NOLC1Q14978 699 aaKnown RBP eCLIP15.13■□□□□ 0.01
TSEN54-206ENST00000579449 ZNF568Q3ZCX4 644 aa15.13■□□□□ 0.01
TSEN54-206ENST00000579449 ANKRD33Q7Z3H0 272 aa15.13■□□□□ 0.01
TSEN54-206ENST00000579449 FAM228AQ86W67 206 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms