RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 PRDM12Q9H4Q4 367 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 PDZD7Q9H5P4 517 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 CHMP5Q9NZZ3 219 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 USP25Q9UHP3 1055 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 KCNH3Q9ULD8 1083 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 HPSEQ9Y251 543 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 TNFSF13BQ9Y275 285 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 IPPQ9Y573 584 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 MRPL42Q9Y6G3 142 aaKnown RBP11.04□□□□□ -0.64
MKS1-208ENST00000579358 TTC3P53804 2025 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 FRMD3A2A2Y4 597 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 CARNS1A5YM72 827 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 TTLL13PA6NNM8 815 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 K7ENM7 598 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 INPPL1O15357 1258 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 NPTXRO95502 500 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 EDN1P05305 212 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 RB1P06400 928 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 ATXN8OSP0DMR3 200 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 ITGA4P13612 1032 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 PFKFB1P16118 471 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 LAG3P18627 525 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 LIG1P18858 919 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 CTNNB1P35222 781 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 BMPR1AP36894 532 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 TMEM132AQ24JP5 1023 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 EPC2Q52LR7 807 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 NT5DC1Q5TFE4 455 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 ATF7IP2Q5U623 682 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 ZPBP2Q6X784 338 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 AGMOQ6ZNB7 445 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 HAUS6Q7Z4H7 955 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 SPRED2Q7Z698 418 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 FAM178BQ8IXR5 827 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 TMEM192Q8IY95 271 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 CEP57L1Q8IYX8 460 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 FBXO22Q8NEZ5 403 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 HELQQ8TDG4 1101 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 ARNTL2Q8WYA1 636 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 P2RX5Q93086 422 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 HVCN1Q96D96 273 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 ACO2Q99798 780 aaKnown RBP11.03□□□□□ -0.64
MKS1-208ENST00000579358 TRIM9Q9C026 710 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 ZHX3Q9H4I2 956 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 RSAD1Q9HA92 442 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 GDPD2Q9HCC8 539 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 AAASQ9NRG9 546 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 OLFML3Q9NRN5 406 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 STXBP5LQ9Y2K9 1186 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 GIT1Q9Y2X7 761 aa11.03□□□□□ -0.64
MKS1-208ENST00000579358 A0A1B0GVL5 298 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 EPOPA6NHQ4 379 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 MEIS3P2A8K0S8 358 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 OFD1O75665 1012 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 TOM1L1O75674 476 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 PIGRP01833 764 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 SLFN14P0C7P3 912 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 FOSL2P15408 326 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 POU3F3P20264 500 aaPredicted RBP11.02□□□□□ -0.65
MKS1-208ENST00000579358 PROZP22891 400 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 GTF2BQ00403 316 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 CSPP1Q1MSJ5 1256 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 NOMO2Q5JPE7 1267 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 EEF1DP3Q658K8 133 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 CDR2LQ86X02 465 aaPredicted RBP11.02□□□□□ -0.65
MKS1-208ENST00000579358 SFR1Q86XK3 245 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 MAP4K3Q8IVH8 894 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 CCDC65Q8IXS2 484 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 URGCPQ8TCY9 931 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 MYLIPQ8WY64 445 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 MRPS27Q92552 414 aaKnown RBP11.02□□□□□ -0.65
MKS1-208ENST00000579358 LPPQ93052 612 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 C7orf25Q9BPX7 421 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 C11orf84Q9BUA3 381 aaPredicted RBP11.02□□□□□ -0.65
MKS1-208ENST00000579358 NXF3Q9H4D5 531 aaKnown RBP11.02□□□□□ -0.65
MKS1-208ENST00000579358 CWH43Q9H720 699 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 CERS4Q9HA82 394 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 PTPRHQ9HD43 1115 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 TYW1Q9NV66 732 aaKnown RBP11.02□□□□□ -0.65
MKS1-208ENST00000579358 KANSL3Q9P2N6 904 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 MTUS1Q9ULD2 1270 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 TBX20Q9UMR3 447 aa11.02□□□□□ -0.65
MKS1-208ENST00000579358 H3BNC9 293 aa11.01□□□□□ -0.65
MKS1-208ENST00000579358 ABLIM1O14639 778 aa11.01□□□□□ -0.65
MKS1-208ENST00000579358 ACTN4O43707 911 aaKnown RBP11.01□□□□□ -0.65
MKS1-208ENST00000579358 SLC34A2O95436 690 aa11.01□□□□□ -0.65
MKS1-208ENST00000579358 MYL1P05976 194 aa11.01□□□□□ -0.65
MKS1-208ENST00000579358 MCF2P10911 925 aa11.01□□□□□ -0.65
MKS1-208ENST00000579358 IDEP14735 1019 aa11.01□□□□□ -0.65
MKS1-208ENST00000579358 SYKP43405 635 aa11.01□□□□□ -0.65
MKS1-208ENST00000579358 ALCAMQ13740 583 aa11.01□□□□□ -0.65
MKS1-208ENST00000579358 ADGRE1Q14246 886 aa11.01□□□□□ -0.65
MKS1-208ENST00000579358 ZNF568Q3ZCX4 644 aa11.01□□□□□ -0.65
MKS1-208ENST00000579358 MPZL3Q6UWV2 235 aa11.01□□□□□ -0.65
MKS1-208ENST00000579358 LRRC55Q6ZSA7 311 aa11.01□□□□□ -0.65
MKS1-208ENST00000579358 ZNF720Q7Z2F6 126 aa11.01□□□□□ -0.65
MKS1-208ENST00000579358 GDPD5Q8WTR4 605 aa11.01□□□□□ -0.65
MKS1-208ENST00000579358 STAMQ92783 540 aa11.01□□□□□ -0.65
MKS1-208ENST00000579358 TARS2Q9BW92 718 aaKnown RBP11.01□□□□□ -0.65
MKS1-208ENST00000579358 STRA6Q9BX79 667 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms