RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 PSEN2P49810 448 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 TAF6P49848 677 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 NOP14P78316 857 aaKnown RBP3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 ORC2Q13416 577 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 PDIA6Q15084 440 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 CDO1Q16878 200 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 SYTL3Q4VX76 610 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 ZNF394Q53GI3 561 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 SGO2Q562F6 1265 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 GJC2Q5T442 439 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 IL31Q6EBC2 164 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 RAPH1Q70E73 1250 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 ARFGAP2Q8N6H7 521 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 BBOF1Q8ND07 529 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 RDM1Q8NG50 284 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 CDC26Q8NHZ8 85 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 MRFAP1L1Q96HT8 127 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 SHDQ96IW2 340 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 EPAS1Q99814 870 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 LXNQ9BS40 222 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 TINF2Q9BSI4 451 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 OXCT2Q9BYC2 517 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 MIR1-1HGQ9H1L0 117 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 EPC1Q9H2F5 836 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 C11orf49Q9H6J7 331 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 ASNSD1Q9NWL6 643 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 TMEM260Q9NX78 707 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 TLK1Q9UKI8 766 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 PPP1R9AQ9ULJ8 1098 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 NFU1Q9UMS0 254 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 MEI4A8MW99 385 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 H0Y626 953 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 M0QYV0 167 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 NVLO15381 856 aaKnown RBP3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 IL18RAPO95256 599 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 THP07101 528 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 SLC2A3P11169 496 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 KRT3P12035 628 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 KRT15P19012 456 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 SCP2P22307 547 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 AKT1P31749 480 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 SERPINB6P35237 376 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 TUFMP49411 452 aaKnown RBP3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 HIRAP54198 1017 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 RPS6P62753 249 aaKnown RBP3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 ZNF543Q08ER8 600 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 TFDP2Q14188 446 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 GRM4Q14833 912 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 POLD3Q15054 466 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 KIZQ2M2Z5 673 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 TTC31Q49AM3 519 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 PABPC1LQ4VXU2 614 aaKnown RBP3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 PPP6R3Q5H9R7 873 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 KAZNQ674X7 775 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 PPP4R3CPQ6ZMV5 832 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 FRA10AC1Q70Z53 315 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 CHSY1Q86X52 802 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 FBXO16Q8IX29 292 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 PPFIBP2Q8ND30 876 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 ARNTL2Q8WYA1 636 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 LZICQ8WZA0 190 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 FAM161BQ96MY7 647 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 CGRRF1Q99675 332 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 SELENOSQ9BQE4 189 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 MOV10L1Q9BXT6 1211 aaKnown RBP3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 RBSNQ9H1K0 784 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 BRD9Q9H8M2 597 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 SENP2Q9HC62 589 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 RBAKQ9NYW8 714 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 POLLQ9UGP5 575 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 LCMT1Q9UIC8 334 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 NAGPAQ9UK23 515 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 GMEB2Q9UKD1 530 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 SCINQ9Y6U3 715 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 GCC2Q8IWJ2 1684 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 ABCC12Q96J65 1359 aa3.13□□□□□ -1.91
SMCHD1-203ENST00000577880 THSD7BQ9C0I4 1608 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 KIF1BO60333 1816 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 A0A1W2PPC1 479 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 FRMD3A2A2Y4 597 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 TBC1D3BA6NDS4 549 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 E5RI56 91 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 M0QYT0 321 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 ARHGAP6O43182 974 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 ORC4O43929 436 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 PCDH8O95206 1070 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 NPTXRO95502 500 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 CHEK2O96017 543 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 RPN1P04843 607 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 ICAM1P05362 532 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 TGFB3P10600 412 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 RLBP1P12271 317 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 CTSEP14091 401 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 SP100P23497 879 aaPredicted RBP3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 MAP4P27816 1152 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 DSG3P32926 999 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 THOP1P52888 689 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 OXCT1P55809 520 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 C21orf59P57076 290 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms