RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 NFX1Q12986 1120 aaKnown RBP13.94□□□□□ -0.18
MKS1-206ENST00000577824 UBXN11Q5T124 520 aa13.94□□□□□ -0.18
MKS1-206ENST00000577824 CRIPAKQ8N1N5 446 aa13.94□□□□□ -0.18
MKS1-206ENST00000577824 GUF1Q8N442 669 aaKnown RBP13.94□□□□□ -0.18
MKS1-206ENST00000577824 HERVK_113Q902F9 699 aa13.94□□□□□ -0.18
MKS1-206ENST00000577824 SYAP1Q96A49 352 aaPredicted RBP13.94□□□□□ -0.18
MKS1-206ENST00000577824 ACCSQ96QU6 501 aa13.94□□□□□ -0.18
MKS1-206ENST00000577824 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.94□□□□□ -0.186e-8■■■■■ 30.2
MKS1-206ENST00000577824 TMEM206Q9H813 350 aa13.94□□□□□ -0.18
MKS1-206ENST00000577824 C1orf112Q9NSG2 853 aa13.94□□□□□ -0.18
MKS1-206ENST00000577824 GDAQ9Y2T3 454 aa13.94□□□□□ -0.18
MKS1-206ENST00000577824 CEP290O15078 2479 aa13.93□□□□□ -0.18
MKS1-206ENST00000577824 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.93□□□□□ -0.18
MKS1-206ENST00000577824 C9IYK1 514 aa13.93□□□□□ -0.18
MKS1-206ENST00000577824 HNRNPDLO14979 420 aaKnown RBP13.93□□□□□ -0.18
MKS1-206ENST00000577824 N4BP3O15049 544 aa13.93□□□□□ -0.18
MKS1-206ENST00000577824 KIF20AO95235 890 aa13.93□□□□□ -0.18
MKS1-206ENST00000577824 PPP1R2P41236 205 aa13.93□□□□□ -0.18
MKS1-206ENST00000577824 RAB27AP51159 221 aa13.93□□□□□ -0.18
MKS1-206ENST00000577824 SNRPFP62306 86 aaKnown RBP13.93□□□□□ -0.18
MKS1-206ENST00000577824 FAM189BP81408 668 aa13.93□□□□□ -0.18
MKS1-206ENST00000577824 MCL1Q07820 350 aa13.93□□□□□ -0.18
MKS1-206ENST00000577824 NCBP1Q09161 790 aaKnown RBP13.93□□□□□ -0.18
MKS1-206ENST00000577824 IKBKEQ14164 716 aa13.93□□□□□ -0.18
MKS1-206ENST00000577824 ATF7IP2Q5U623 682 aa13.93□□□□□ -0.18
MKS1-206ENST00000577824 SLC39A4Q6P5W5 647 aa13.93□□□□□ -0.18
MKS1-206ENST00000577824 SLC27A1Q6PCB7 646 aa13.93□□□□□ -0.18
MKS1-206ENST00000577824 ZNF365Q70YC5 407 aa13.93□□□□□ -0.18
MKS1-206ENST00000577824 RTN4RL1Q86UN2 441 aaPredicted RBP13.93□□□□□ -0.18
MKS1-206ENST00000577824 TARS2Q9BW92 718 aaKnown RBP13.93□□□□□ -0.18
MKS1-206ENST00000577824 KCTD10Q9H3F6 313 aa13.93□□□□□ -0.18
MKS1-206ENST00000577824 EXOC7Q9UPT5 735 aa13.93□□□□□ -0.18
MKS1-206ENST00000577824 PDE4DIPQ5VU43 2346 aa13.93□□□□□ -0.18
MKS1-206ENST00000577824 PTPRSQ13332 1948 aa13.93□□□□□ -0.18
MKS1-206ENST00000577824 A0A0U1RQF3 1178 aa13.92□□□□□ -0.18
MKS1-206ENST00000577824 FAM189A1O60320 539 aa13.92□□□□□ -0.18
MKS1-206ENST00000577824 ZNF623O75123 536 aa13.92□□□□□ -0.18
MKS1-206ENST00000577824 PRPF6O94906 941 aaKnown RBP13.92□□□□□ -0.18
MKS1-206ENST00000577824 FGBP02675 491 aa13.92□□□□□ -0.18
MKS1-206ENST00000577824 ACRP10323 421 aa13.92□□□□□ -0.18
MKS1-206ENST00000577824 SKIP12755 728 aa13.92□□□□□ -0.18
MKS1-206ENST00000577824 ZSCAN20P17040 1043 aaPredicted RBP13.92□□□□□ -0.18
MKS1-206ENST00000577824 WDR5P61964 334 aaKnown RBP13.92□□□□□ -0.18
MKS1-206ENST00000577824 DCAF4L1Q3SXM0 396 aa13.92□□□□□ -0.18
MKS1-206ENST00000577824 ZCWPW2Q504Y3 356 aa13.92□□□□□ -0.18
MKS1-206ENST00000577824 FOXR2Q6PJQ5 311 aa13.92□□□□□ -0.18
MKS1-206ENST00000577824 MPZL3Q6UWV2 235 aa13.92□□□□□ -0.18
MKS1-206ENST00000577824 SLC24A5Q71RS6 500 aa13.92□□□□□ -0.18
MKS1-206ENST00000577824 C12orf56Q8IXR9 622 aa13.92□□□□□ -0.18
MKS1-206ENST00000577824 MYOCDQ8IZQ8 938 aa13.92□□□□□ -0.18
MKS1-206ENST00000577824 ADSSL1Q8N142 457 aa13.92□□□□□ -0.18
MKS1-206ENST00000577824 CPB2Q96IY4 423 aa13.92□□□□□ -0.18
MKS1-206ENST00000577824 ADAM2Q99965 735 aa13.92□□□□□ -0.18
MKS1-206ENST00000577824 CDT1Q9H211 546 aa13.92□□□□□ -0.18
MKS1-206ENST00000577824 ELAC1Q9H777 363 aaKnown RBP13.92□□□□□ -0.18
MKS1-206ENST00000577824 CGNQ9P2M7 1197 aaKnown RBP13.92□□□□□ -0.18
MKS1-206ENST00000577824 A0A0B4J269 797 aa13.91□□□□□ -0.18
MKS1-206ENST00000577824 RBAK-RBAKDNI3L0D1 243 aa13.91□□□□□ -0.18
MKS1-206ENST00000577824 ENPP3O14638 875 aa13.91□□□□□ -0.18
MKS1-206ENST00000577824 TGFB1I1O43294 461 aa13.91□□□□□ -0.18
MKS1-206ENST00000577824 MCF2P10911 925 aa13.91□□□□□ -0.18
MKS1-206ENST00000577824 ATF7P17544 494 aaPredicted RBP13.91□□□□□ -0.18
MKS1-206ENST00000577824 LIG4P49917 911 aa13.91□□□□□ -0.18
MKS1-206ENST00000577824 NOLC1Q14978 699 aaKnown RBP eCLIP13.91□□□□□ -0.18
MKS1-206ENST00000577824 NFIL3Q16649 462 aa13.91□□□□□ -0.18
MKS1-206ENST00000577824 KNOP1Q1ED39 458 aaKnown RBP13.91□□□□□ -0.18
MKS1-206ENST00000577824 EEF1DP3Q658K8 133 aa13.91□□□□□ -0.18
MKS1-206ENST00000577824 CAVIN1Q6NZI2 390 aaKnown RBP13.91□□□□□ -0.18
MKS1-206ENST00000577824 ZNF598Q86UK7 904 aaKnown RBP13.91□□□□□ -0.18
MKS1-206ENST00000577824 RSPH1Q8WYR4 309 aa13.91□□□□□ -0.18
MKS1-206ENST00000577824 ADPGKQ9BRR6 497 aa13.91□□□□□ -0.18
MKS1-206ENST00000577824 HAPLN2Q9GZV7 340 aa13.91□□□□□ -0.18
MKS1-206ENST00000577824 GBP3Q9H0R5 595 aa13.91□□□□□ -0.18
MKS1-206ENST00000577824 FAM105AQ9NUU6 356 aa13.91□□□□□ -0.18
MKS1-206ENST00000577824 TYW1Q9NV66 732 aaKnown RBP13.91□□□□□ -0.18
MKS1-206ENST00000577824 TRAF3IP3Q9Y228 551 aa13.91□□□□□ -0.18
MKS1-206ENST00000577824 USP20Q9Y2K6 914 aa13.91□□□□□ -0.18
MKS1-206ENST00000577824 RALGAPA2Q2PPJ7 1873 aa13.91□□□□□ -0.18
MKS1-206ENST00000577824 TTC3P53804 2025 aa13.9□□□□□ -0.18
MKS1-206ENST00000577824 PDXKO00764 312 aa13.9□□□□□ -0.18
MKS1-206ENST00000577824 EOMESO95936 686 aa13.9□□□□□ -0.18
MKS1-206ENST00000577824 GARTP22102 1010 aa13.9□□□□□ -0.18
MKS1-206ENST00000577824 ADSSP30520 456 aa13.9□□□□□ -0.18
MKS1-206ENST00000577824 PRCPP42785 496 aa13.9□□□□□ -0.18
MKS1-206ENST00000577824 ZNF568Q3ZCX4 644 aa13.9□□□□□ -0.18
MKS1-206ENST00000577824 TWF2Q6IBS0 349 aaKnown RBP13.9□□□□□ -0.18
MKS1-206ENST00000577824 SLFN12LQ6IEE8 588 aa13.9□□□□□ -0.18
MKS1-206ENST00000577824 OTOP2Q7RTS6 562 aa13.9□□□□□ -0.18
MKS1-206ENST00000577824 APBB1IPQ7Z5R6 666 aaPredicted RBP13.9□□□□□ -0.18
MKS1-206ENST00000577824 MRPL10Q7Z7H8 261 aaKnown RBP13.9□□□□□ -0.18
MKS1-206ENST00000577824 ECHDC2Q86YB7 292 aa13.9□□□□□ -0.18
MKS1-206ENST00000577824 NPAS4Q8IUM7 802 aa13.9□□□□□ -0.18
MKS1-206ENST00000577824 SMYD4Q8IYR2 804 aaPredicted RBP13.9□□□□□ -0.18
MKS1-206ENST00000577824 SMG8Q8ND04 991 aaKnown RBP13.9□□□□□ -0.18
MKS1-206ENST00000577824 GOLGA5Q8TBA6 731 aa13.9□□□□□ -0.18
MKS1-206ENST00000577824 BICD1Q96G01 975 aa13.9□□□□□ -0.18
MKS1-206ENST00000577824 SLC9A7Q96T83 725 aa13.9□□□□□ -0.18
MKS1-206ENST00000577824 EIF2AQ9BY44 585 aaKnown RBP13.9□□□□□ -0.18
MKS1-206ENST00000577824 MTIF3Q9H2K0 278 aaKnown RBP13.9□□□□□ -0.18
MKS1-206ENST00000577824 IKZF4Q9H2S9 585 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms