RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 NIFKQ9BYG3 293 aaKnown RBP18.27■□□□□ 0.52
CTDNEP1-211ENST00000575783 EPC1Q9H2F5 836 aa18.27■□□□□ 0.52
CTDNEP1-211ENST00000575783 UNC45AQ9H3U1 944 aa18.27■□□□□ 0.52
CTDNEP1-211ENST00000575783 AGPAT5Q9NUQ2 364 aa18.27■□□□□ 0.52
CTDNEP1-211ENST00000575783 CNTNAP2Q9UHC6 1331 aa18.26■□□□□ 0.51
CTDNEP1-211ENST00000575783 IGKV6-21A0A0C4DH24 114 aa18.26■□□□□ 0.51
CTDNEP1-211ENST00000575783 DDX11L8A8MPP1 907 aa18.26■□□□□ 0.51
CTDNEP1-211ENST00000575783 MSH4O15457 936 aa18.26■□□□□ 0.51
CTDNEP1-211ENST00000575783 ZBTB43O43298 467 aa18.26■□□□□ 0.51
CTDNEP1-211ENST00000575783 TGM1P22735 817 aa18.26■□□□□ 0.51
CTDNEP1-211ENST00000575783 SFNP31947 248 aa18.26■□□□□ 0.51
CTDNEP1-211ENST00000575783 JAK3P52333 1124 aa18.26■□□□□ 0.51
CTDNEP1-211ENST00000575783 PRKCQQ04759 706 aa18.26■□□□□ 0.51
CTDNEP1-211ENST00000575783 XKR3Q5GH77 459 aa18.26■□□□□ 0.51
CTDNEP1-211ENST00000575783 GRASPQ7Z6J2 395 aaPredicted RBP18.26■□□□□ 0.51
CTDNEP1-211ENST00000575783 COLGALT2Q8IYK4 626 aa18.26■□□□□ 0.51
CTDNEP1-211ENST00000575783 LENG9Q96B70 501 aa18.26■□□□□ 0.51
CTDNEP1-211ENST00000575783 CEP89Q96ST8 783 aa18.26■□□□□ 0.51
CTDNEP1-211ENST00000575783 C6orf50Q9HD87 102 aa18.26■□□□□ 0.51
CTDNEP1-211ENST00000575783 PARD6AQ9NPB6 346 aa18.26■□□□□ 0.51
CTDNEP1-211ENST00000575783 GMEB2Q9UKD1 530 aa18.26■□□□□ 0.51
CTDNEP1-211ENST00000575783 CDH7Q9ULB5 785 aa18.26■□□□□ 0.51
CTDNEP1-211ENST00000575783 BRPF3Q9ULD4 1205 aa18.26■□□□□ 0.51
CTDNEP1-211ENST00000575783 ZFP37Q9Y6Q3 630 aaPredicted RBP18.26■□□□□ 0.51
CTDNEP1-211ENST00000575783 MAP1BP46821 2468 aaKnown RBP18.26■□□□□ 0.51
CTDNEP1-211ENST00000575783 TBC1D4O60343 1298 aa18.25■□□□□ 0.51
CTDNEP1-211ENST00000575783 RPL17P18621 184 aaKnown RBP18.25■□□□□ 0.51
CTDNEP1-211ENST00000575783 CIITAP33076 1130 aa18.25■□□□□ 0.51
CTDNEP1-211ENST00000575783 NTHL1P78549 312 aa18.25■□□□□ 0.51
CTDNEP1-211ENST00000575783 PPM1JQ5JR12 505 aa18.25■□□□□ 0.51
CTDNEP1-211ENST00000575783 ZBTB41Q5SVQ8 909 aa18.25■□□□□ 0.51
CTDNEP1-211ENST00000575783 LRCH2Q5VUJ6 765 aa18.25■□□□□ 0.51
CTDNEP1-211ENST00000575783 CCDC136Q96JN2 1154 aa18.25■□□□□ 0.51
CTDNEP1-211ENST00000575783 RIT2Q99578 217 aa18.25■□□□□ 0.51
CTDNEP1-211ENST00000575783 TEKT3Q9BXF9 490 aa18.25■□□□□ 0.51
CTDNEP1-211ENST00000575783 OSBPL6Q9BZF3 934 aa18.25■□□□□ 0.51
CTDNEP1-211ENST00000575783 IFT122Q9HBG6 1241 aa18.25■□□□□ 0.51
CTDNEP1-211ENST00000575783 LTB4R2Q9NPC1 389 aa18.25■□□□□ 0.51
CTDNEP1-211ENST00000575783 RALYQ9UKM9 306 aaKnown RBP18.25■□□□□ 0.51
CTDNEP1-211ENST00000575783 GOLGA8AA7E2F4 631 aa18.24■□□□□ 0.51
CTDNEP1-211ENST00000575783 GOLGA8BA8MQT2 603 aa18.24■□□□□ 0.51
CTDNEP1-211ENST00000575783 LILRB5O75023 590 aa18.24■□□□□ 0.51
CTDNEP1-211ENST00000575783 MAFO75444 373 aaPredicted RBP18.24■□□□□ 0.51
CTDNEP1-211ENST00000575783 NR1I2O75469 434 aa18.24■□□□□ 0.51
CTDNEP1-211ENST00000575783 ZMYND10O75800 440 aa18.24■□□□□ 0.51
CTDNEP1-211ENST00000575783 PAPLNO95428 1278 aa18.24■□□□□ 0.51
CTDNEP1-211ENST00000575783 SRGAP2CP0DJJ0 459 aa18.24■□□□□ 0.51
CTDNEP1-211ENST00000575783 ITGA4P13612 1032 aa18.24■□□□□ 0.51
CTDNEP1-211ENST00000575783 HOXA11P31270 313 aaPredicted RBP18.24■□□□□ 0.51
CTDNEP1-211ENST00000575783 LPAL2Q16609 132 aa18.24■□□□□ 0.51
CTDNEP1-211ENST00000575783 PFKFB3Q16875 520 aaPredicted RBP18.24■□□□□ 0.51
CTDNEP1-211ENST00000575783 UBXN11Q5T124 520 aa18.24■□□□□ 0.51
CTDNEP1-211ENST00000575783 CREB3L3Q68CJ9 461 aa18.24■□□□□ 0.51
CTDNEP1-211ENST00000575783 LILRA6Q6PI73 481 aa18.24■□□□□ 0.51
CTDNEP1-211ENST00000575783 MIER3Q7Z3K6 550 aa18.24■□□□□ 0.51
CTDNEP1-211ENST00000575783 RNF168Q8IYW5 571 aaPredicted RBP18.24■□□□□ 0.51
CTDNEP1-211ENST00000575783 TCEANC2Q96MN5 208 aa18.24■□□□□ 0.51
CTDNEP1-211ENST00000575783 UBN1Q9NPG3 1134 aa18.24■□□□□ 0.51
CTDNEP1-211ENST00000575783 CHST7Q9NS84 486 aa18.24■□□□□ 0.51
CTDNEP1-211ENST00000575783 NAP1L2Q9ULW6 460 aaPredicted RBP18.24■□□□□ 0.51
CTDNEP1-211ENST00000575783 ARL5CA6NH57 179 aa18.23■□□□□ 0.51
CTDNEP1-211ENST00000575783 STBD1O95210 358 aa18.23■□□□□ 0.51
CTDNEP1-211ENST00000575783 EFEMP2O95967 443 aa18.23■□□□□ 0.51
CTDNEP1-211ENST00000575783 NCLP19338 710 aaKnown RBP18.23■□□□□ 0.51
CTDNEP1-211ENST00000575783 CDC27P30260 824 aa18.23■□□□□ 0.51
CTDNEP1-211ENST00000575783 MAGEA9P43362 315 aa18.23■□□□□ 0.51
CTDNEP1-211ENST00000575783 PFKPQ01813 784 aa18.23■□□□□ 0.51
CTDNEP1-211ENST00000575783 SPEM2Q0P670 501 aa18.23■□□□□ 0.51
CTDNEP1-211ENST00000575783 USP41Q3LFD5 358 aa18.23■□□□□ 0.51
CTDNEP1-211ENST00000575783 MTSS1LQ765P7 747 aa18.23■□□□□ 0.51
CTDNEP1-211ENST00000575783 SLC5A5Q92911 643 aa18.23■□□□□ 0.51
CTDNEP1-211ENST00000575783 FGF13Q92913 245 aa18.23■□□□□ 0.51
CTDNEP1-211ENST00000575783 GAD1Q99259 594 aa18.23■□□□□ 0.51
CTDNEP1-211ENST00000575783 KXD1Q9BQD3 176 aa18.23■□□□□ 0.51
CTDNEP1-211ENST00000575783 COLEC11Q9BWP8 271 aa18.23■□□□□ 0.51
CTDNEP1-211ENST00000575783 GPR62Q9BZJ7 368 aa18.23■□□□□ 0.51
CTDNEP1-211ENST00000575783 ZMYND12Q9H0C1 365 aa18.23■□□□□ 0.51
CTDNEP1-211ENST00000575783 RNF39Q9H2S5 420 aa18.23■□□□□ 0.51
CTDNEP1-211ENST00000575783 MINDY3Q9H8M7 445 aa18.23■□□□□ 0.51
CTDNEP1-211ENST00000575783 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.23■□□□□ 0.51
CTDNEP1-211ENST00000575783 POLIQ9UNA4 740 aa18.23■□□□□ 0.51
CTDNEP1-211ENST00000575783 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.23■□□□□ 0.51
CTDNEP1-211ENST00000575783 MYH9P35579 1960 aaKnown RBP18.22■□□□□ 0.51
CTDNEP1-211ENST00000575783 USP24Q9UPU5 2620 aa18.22■□□□□ 0.51
CTDNEP1-211ENST00000575783 COL4A3Q01955 1670 aa18.22■□□□□ 0.51
CTDNEP1-211ENST00000575783 FANCMQ8IYD8 2048 aa18.22■□□□□ 0.51
CTDNEP1-211ENST00000575783 C1RP00736 705 aa18.22■□□□□ 0.51
CTDNEP1-211ENST00000575783 KCNA4P22459 653 aa18.22■□□□□ 0.51
CTDNEP1-211ENST00000575783 MLH1P40692 756 aa18.22■□□□□ 0.51
CTDNEP1-211ENST00000575783 SCNN1GP51170 649 aa18.22■□□□□ 0.51
CTDNEP1-211ENST00000575783 SMG8Q8ND04 991 aaKnown RBP18.22■□□□□ 0.51
CTDNEP1-211ENST00000575783 NELL1Q92832 810 aa18.22■□□□□ 0.51
CTDNEP1-211ENST00000575783 LSG1Q9H089 658 aaKnown RBP18.22■□□□□ 0.51
CTDNEP1-211ENST00000575783 FAM217BQ9NTX9 383 aaPredicted RBP18.22■□□□□ 0.51
CTDNEP1-211ENST00000575783 MIOSQ9NXC5 875 aa18.22■□□□□ 0.51
CTDNEP1-211ENST00000575783 FNIP2Q9P278 1114 aa18.22■□□□□ 0.51
CTDNEP1-211ENST00000575783 RAB23Q9ULC3 237 aa18.22■□□□□ 0.51
CTDNEP1-211ENST00000575783 COL4A3BPQ9Y5P4 624 aa18.22■□□□□ 0.51
CTDNEP1-211ENST00000575783 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.21■□□□□ 0.51
CTDNEP1-211ENST00000575783 ESYT2A0FGR8 921 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms