RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 ADPGKQ9BRR6 497 aa25.56■■□□□ 1.68
TVP23A-206ENST00000572980 RNF216Q9NWF9 866 aaPredicted RBP25.56■■□□□ 1.68
TVP23A-206ENST00000572980 UBE4BO95155 1302 aa25.55■■□□□ 1.68
TVP23A-206ENST00000572980 SKIP12755 728 aa25.55■■□□□ 1.68
TVP23A-206ENST00000572980 SKOR2Q2VWA4 1001 aaPredicted RBP25.55■■□□□ 1.68
TVP23A-206ENST00000572980 ZNF658Q5TYW1 1059 aaPredicted RBP25.55■■□□□ 1.68
TVP23A-206ENST00000572980 LINC01599Q8WXQ3 324 aa25.55■■□□□ 1.68
TVP23A-206ENST00000572980 SYAP1Q96A49 352 aaPredicted RBP25.55■■□□□ 1.68
TVP23A-206ENST00000572980 TCHPQ9BT92 498 aa25.55■■□□□ 1.68
TVP23A-206ENST00000572980 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.54■■□□□ 1.68
TVP23A-206ENST00000572980 TOM1L1O75674 476 aa25.54■■□□□ 1.68
TVP23A-206ENST00000572980 PIGRP01833 764 aa25.54■■□□□ 1.68
TVP23A-206ENST00000572980 AMHP03971 560 aa25.54■■□□□ 1.68
TVP23A-206ENST00000572980 RAB27AP51159 221 aa25.54■■□□□ 1.68
TVP23A-206ENST00000572980 WDR5P61964 334 aaKnown RBP25.54■■□□□ 1.68
TVP23A-206ENST00000572980 KCNA1Q09470 495 aa25.54■■□□□ 1.68
TVP23A-206ENST00000572980 SHHQ15465 462 aa25.54■■□□□ 1.68
TVP23A-206ENST00000572980 KLHL40Q2TBA0 621 aa25.54■■□□□ 1.68
TVP23A-206ENST00000572980 SCFD1Q8WVM8 642 aa25.54■■□□□ 1.68
TVP23A-206ENST00000572980 TRIM6Q9C030 488 aaPredicted RBP25.54■■□□□ 1.68
TVP23A-206ENST00000572980 PDZD7Q9H5P4 517 aa25.54■■□□□ 1.68
TVP23A-206ENST00000572980 MAN1B1Q9UKM7 699 aa25.54■■□□□ 1.68
TVP23A-206ENST00000572980 MICAL3Q7RTP6 2002 aa25.54■■□□□ 1.68
TVP23A-206ENST00000572980 A0A0U1RQF3 1178 aa25.53■■□□□ 1.68
TVP23A-206ENST00000572980 C9IYK1 514 aa25.53■■□□□ 1.68
TVP23A-206ENST00000572980 NFKBIBQ15653 356 aa25.53■■□□□ 1.68
TVP23A-206ENST00000572980 BMT2Q1RMZ1 405 aa25.53■■□□□ 1.68
TVP23A-206ENST00000572980 C9orf50Q5SZB4 431 aa25.53■■□□□ 1.68
TVP23A-206ENST00000572980 CCDC183Q5T5S1 534 aa25.53■■□□□ 1.68
TVP23A-206ENST00000572980 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.53■■□□□ 1.68
TVP23A-206ENST00000572980 CDR2LQ86X02 465 aaPredicted RBP25.53■■□□□ 1.68
TVP23A-206ENST00000572980 MYOCDQ8IZQ8 938 aa25.53■■□□□ 1.68
TVP23A-206ENST00000572980 TRIML1Q8N9V2 468 aa25.53■■□□□ 1.68
TVP23A-206ENST00000572980 RNPC3Q96LT9 517 aaKnown RBP25.53■■□□□ 1.68
TVP23A-206ENST00000572980 FAM105AQ9NUU6 356 aa25.53■■□□□ 1.68
TVP23A-206ENST00000572980 SLC4A7Q9Y6M7 1214 aa25.53■■□□□ 1.68
TVP23A-206ENST00000572980 PTPRHQ9HD43 1115 aa25.52■■□□□ 1.68
TVP23A-206ENST00000572980 CXXC1Q9P0U4 656 aaPredicted RBP25.52■■□□□ 1.68
TVP23A-206ENST00000572980 GDAQ9Y2T3 454 aa25.52■■□□□ 1.68
TVP23A-206ENST00000572980 BIN1O00499 593 aa25.52■■□□□ 1.68
TVP23A-206ENST00000572980 CLDN3O15551 220 aa25.52■■□□□ 1.68
TVP23A-206ENST00000572980 FAM189BP81408 668 aa25.52■■□□□ 1.68
TVP23A-206ENST00000572980 KNOP1Q1ED39 458 aaKnown RBP25.52■■□□□ 1.68
TVP23A-206ENST00000572980 DCAF4L1Q3SXM0 396 aa25.52■■□□□ 1.68
TVP23A-206ENST00000572980 ZNF568Q3ZCX4 644 aa25.52■■□□□ 1.68
TVP23A-206ENST00000572980 UBXN11Q5T124 520 aa25.52■■□□□ 1.68
TVP23A-206ENST00000572980 RASIP1Q5U651 963 aa25.52■■□□□ 1.68
TVP23A-206ENST00000572980 ISM2Q6H9L7 571 aa25.52■■□□□ 1.68
TVP23A-206ENST00000572980 SLFN12LQ6IEE8 588 aa25.52■■□□□ 1.68
TVP23A-206ENST00000572980 MPZL3Q6UWV2 235 aa25.52■■□□□ 1.68
TVP23A-206ENST00000572980 CHRDL2Q6WN34 429 aa25.52■■□□□ 1.68
TVP23A-206ENST00000572980 PCDHB2Q9Y5E7 798 aa25.52■■□□□ 1.68
TVP23A-206ENST00000572980 ZNF623O75123 536 aa25.51■■□□□ 1.67
TVP23A-206ENST00000572980 NPTXRO95502 500 aa25.51■■□□□ 1.67
TVP23A-206ENST00000572980 PROZP22891 400 aa25.51■■□□□ 1.67
TVP23A-206ENST00000572980 MATR3P43243 847 aaKnown RBP eCLIP25.51■■□□□ 1.67
TVP23A-206ENST00000572980 EEF1DP3Q658K8 133 aa25.51■■□□□ 1.67
TVP23A-206ENST00000572980 ECHDC2Q86YB7 292 aa25.51■■□□□ 1.67
TVP23A-206ENST00000572980 NELFCDQ8IXH7 590 aa25.51■■□□□ 1.67
TVP23A-206ENST00000572980 GUF1Q8N442 669 aaKnown RBP25.51■■□□□ 1.67
TVP23A-206ENST00000572980 PHOSPHO2Q8TCD6 241 aa25.51■■□□□ 1.67
TVP23A-206ENST00000572980 EIF2AQ9BY44 585 aaKnown RBP25.51■■□□□ 1.67
TVP23A-206ENST00000572980 GBP3Q9H0R5 595 aa25.51■■□□□ 1.67
TVP23A-206ENST00000572980 ELAC1Q9H777 363 aaKnown RBP25.51■■□□□ 1.67
TVP23A-206ENST00000572980 ANKFY1Q9P2R3 1169 aa25.51■■□□□ 1.67
TVP23A-206ENST00000572980 LRFN2Q9ULH4 789 aa25.51■■□□□ 1.67
TVP23A-206ENST00000572980 EOMESO95936 686 aa25.5■■□□□ 1.67
TVP23A-206ENST00000572980 STAG3L1P0CL83 205 aa25.5■■□□□ 1.67
TVP23A-206ENST00000572980 MORC3Q14149 939 aa25.5■■□□□ 1.67
TVP23A-206ENST00000572980 PRPF38BQ5VTL8 546 aaKnown RBP25.5■■□□□ 1.67
TVP23A-206ENST00000572980 CAVIN1Q6NZI2 390 aaKnown RBP25.5■■□□□ 1.67
TVP23A-206ENST00000572980 HACE1Q8IYU2 909 aa25.5■■□□□ 1.67
TVP23A-206ENST00000572980 TDHQ8IZJ6 230 aa25.5■■□□□ 1.67
TVP23A-206ENST00000572980 ZBTB45Q96K62 511 aaPredicted RBP25.5■■□□□ 1.67
TVP23A-206ENST00000572980 SLC9A7Q96T83 725 aa25.5■■□□□ 1.67
TVP23A-206ENST00000572980 TMEM161AQ9NX61 479 aa25.5■■□□□ 1.67
TVP23A-206ENST00000572980 MAPK8IP1Q9UQF2 711 aa25.5■■□□□ 1.67
TVP23A-206ENST00000572980 PCDHB7Q9Y5E2 793 aa25.5■■□□□ 1.67
TVP23A-206ENST00000572980 MCF2P10911 925 aa25.49■■□□□ 1.67
TVP23A-206ENST00000572980 IBSPP21815 317 aaPredicted RBP25.49■■□□□ 1.67
TVP23A-206ENST00000572980 HOXD13P35453 343 aa25.49■■□□□ 1.67
TVP23A-206ENST00000572980 DEFB103AP81534 67 aa25.49■■□□□ 1.67
TVP23A-206ENST00000572980 MCL1Q07820 350 aa25.49■■□□□ 1.67
TVP23A-206ENST00000572980 COBLL1Q53SF7 1204 aa25.49■■□□□ 1.67
TVP23A-206ENST00000572980 NPAS4Q8IUM7 802 aa25.49■■□□□ 1.67
TVP23A-206ENST00000572980 SMYD4Q8IYR2 804 aaPredicted RBP25.49■■□□□ 1.67
TVP23A-206ENST00000572980 TOP1MTQ969P6 601 aa25.49■■□□□ 1.67
TVP23A-206ENST00000572980 PGBD4Q96DM1 585 aa25.49■■□□□ 1.67
TVP23A-206ENST00000572980 TMEM63CQ9P1W3 806 aa25.49■■□□□ 1.67
TVP23A-206ENST00000572980 ANKRD63C9JTQ0 380 aa25.48■■□□□ 1.67
TVP23A-206ENST00000572980 PPP1R2P41236 205 aa25.48■■□□□ 1.67
TVP23A-206ENST00000572980 SNRPFP62306 86 aaKnown RBP25.48■■□□□ 1.67
TVP23A-206ENST00000572980 STIM1Q13586 685 aa25.48■■□□□ 1.67
TVP23A-206ENST00000572980 NOLC1Q14978 699 aaKnown RBP eCLIP25.48■■□□□ 1.67
TVP23A-206ENST00000572980 SLC39A4Q6P5W5 647 aa25.48■■□□□ 1.67
TVP23A-206ENST00000572980 RBM43Q6ZSC3 357 aaKnown RBP25.48■■□□□ 1.67
TVP23A-206ENST00000572980 HS2ST1Q7LGA3 356 aa25.48■■□□□ 1.67
TVP23A-206ENST00000572980 ZBTB33Q86T24 672 aa25.48■■□□□ 1.67
TVP23A-206ENST00000572980 CDT1Q9H211 546 aa25.48■■□□□ 1.67
TVP23A-206ENST00000572980 PRO3102Q9H379 93 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms