RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 IGKV6-21A0A0C4DH24 114 aa8.32□□□□□ -1.08
NUP88-205ENST00000572809 TMEM150BA6NC51 233 aa8.32□□□□□ -1.08
NUP88-205ENST00000572809 TTLL8A6PVC2 850 aa8.32□□□□□ -1.08
NUP88-205ENST00000572809 ESPNB1AK53 854 aa8.32□□□□□ -1.08
NUP88-205ENST00000572809 MAFO75444 373 aaPredicted RBP8.32□□□□□ -1.08
NUP88-205ENST00000572809 ZSCAN20P17040 1043 aaPredicted RBP8.32□□□□□ -1.08
NUP88-205ENST00000572809 IBSPP21815 317 aaPredicted RBP8.32□□□□□ -1.08
NUP88-205ENST00000572809 EIF4BP23588 611 aaKnown RBP8.32□□□□□ -1.08
NUP88-205ENST00000572809 SARSP49591 514 aaKnown RBP8.32□□□□□ -1.08
NUP88-205ENST00000572809 GPC3P51654 580 aa8.32□□□□□ -1.08
NUP88-205ENST00000572809 MARSP56192 900 aaKnown RBP8.32□□□□□ -1.08
NUP88-205ENST00000572809 HMGN5P82970 282 aaKnown RBP8.32□□□□□ -1.08
NUP88-205ENST00000572809 GUCY1B3Q02153 619 aa8.32□□□□□ -1.08
NUP88-205ENST00000572809 PTPROQ16827 1216 aa8.32□□□□□ -1.08
NUP88-205ENST00000572809 SLC24A5Q71RS6 500 aa8.32□□□□□ -1.08
NUP88-205ENST00000572809 ANO5Q75V66 913 aa8.32□□□□□ -1.08
NUP88-205ENST00000572809 OTUD6AQ7L8S5 288 aa8.32□□□□□ -1.08
NUP88-205ENST00000572809 FAM228AQ86W67 206 aa8.32□□□□□ -1.08
NUP88-205ENST00000572809 C4orf19Q8IY42 314 aa8.32□□□□□ -1.08
NUP88-205ENST00000572809 EXOC8Q8IYI6 725 aa8.32□□□□□ -1.08
NUP88-205ENST00000572809 FAM184AQ8NB25 1140 aa8.32□□□□□ -1.08
NUP88-205ENST00000572809 NANOS1Q8WY41 292 aaKnown RBP8.32□□□□□ -1.08
NUP88-205ENST00000572809 DYDC2Q96IM9 177 aa8.32□□□□□ -1.08
NUP88-205ENST00000572809 C8orf76Q96K31 380 aa8.32□□□□□ -1.08
NUP88-205ENST00000572809 ZNF668Q96K58 619 aaPredicted RBP8.32□□□□□ -1.08
NUP88-205ENST00000572809 ASB2Q96Q27 587 aa8.32□□□□□ -1.08
NUP88-205ENST00000572809 CEP89Q96ST8 783 aa8.32□□□□□ -1.08
NUP88-205ENST00000572809 CYP26B1Q9NR63 512 aa8.32□□□□□ -1.08
NUP88-205ENST00000572809 SH2B1Q9NRF2 756 aaPredicted RBP8.32□□□□□ -1.08
NUP88-205ENST00000572809 C1orf112Q9NSG2 853 aa8.32□□□□□ -1.08
NUP88-205ENST00000572809 RGL1Q9NZL6 768 aa8.32□□□□□ -1.08
NUP88-205ENST00000572809 COG5Q9UP83 839 aa8.32□□□□□ -1.08
NUP88-205ENST00000572809 ADGRA3Q8IWK6 1321 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 LOXHD1Q8IVV2 1947 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 TTC3P53804 2025 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 C9IYK1 514 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 C5orf67F2Z3F1 127 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 MGEA5O60502 916 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 SLITRK3O94933 977 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 DARSP14868 501 aaKnown RBP8.31□□□□□ -1.08
NUP88-205ENST00000572809 ATP2B1P20020 1258 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 CTNNB1P35222 781 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 TXKP42681 527 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 NPEPPSP55786 919 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 FAM189BP81408 668 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 SPIRE1Q08AE8 756 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 DPYDQ12882 1025 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 DRP2Q13474 957 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 CTTNQ14247 550 aaKnown RBP8.31□□□□□ -1.08
NUP88-205ENST00000572809 DSC3Q14574 896 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 RABEP1Q15276 862 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 CALCRLQ16602 461 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 SWI5Q1ZZU3 235 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 AAK1Q2M2I8 961 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 NCAPH2Q6IBW4 605 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 TPH2Q8IWU9 490 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 CMTR2Q8IYT2 770 aaKnown RBP8.31□□□□□ -1.08
NUP88-205ENST00000572809 FBXO18Q8NFZ0 1043 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 CLP1Q92989 425 aaKnown RBP8.31□□□□□ -1.08
NUP88-205ENST00000572809 MRPL38Q96DV4 380 aaKnown RBP8.31□□□□□ -1.08
NUP88-205ENST00000572809 CEP170P1Q96L14 293 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 SCLT1Q96NL6 688 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 KCTD15Q96SI1 283 aaPredicted RBP8.31□□□□□ -1.08
NUP88-205ENST00000572809 JPH2Q9BR39 696 aaPredicted RBP8.31□□□□□ -1.08
NUP88-205ENST00000572809 GCOM2Q9BZD3 368 aaPredicted RBP8.31□□□□□ -1.08
NUP88-205ENST00000572809 INO80BQ9C086 356 aaPredicted RBP8.31□□□□□ -1.08
NUP88-205ENST00000572809 ELAC1Q9H777 363 aaKnown RBP8.31□□□□□ -1.08
NUP88-205ENST00000572809 ZSWIM4Q9H7M6 989 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 TTC12Q9H892 705 aaPredicted RBP8.31□□□□□ -1.08
NUP88-205ENST00000572809 UPF2Q9HAU5 1272 aaKnown RBP8.31□□□□□ -1.08
NUP88-205ENST00000572809 RC3H2Q9HBD1 1191 aaKnown RBP8.31□□□□□ -1.08
NUP88-205ENST00000572809 SUCLA2Q9P2R7 463 aaPredicted RBP8.31□□□□□ -1.08
NUP88-205ENST00000572809 WRAP73Q9P2S5 460 aaPredicted RBP8.31□□□□□ -1.08
NUP88-205ENST00000572809 PRRC2BQ5JSZ5 2229 aaKnown RBP8.31□□□□□ -1.08
NUP88-205ENST00000572809 WDR81Q562E7 1941 aa8.31□□□□□ -1.08
NUP88-205ENST00000572809 A0A087WZ62 844 aa8.3□□□□□ -1.08
NUP88-205ENST00000572809 ZBTB39O15060 712 aa8.3□□□□□ -1.08
NUP88-205ENST00000572809 NEMFO60524 1076 aa8.3□□□□□ -1.08
NUP88-205ENST00000572809 CSDE1O75534 798 aaKnown RBP8.3□□□□□ -1.08
NUP88-205ENST00000572809 LINC00271P0C7V0 271 aa8.3□□□□□ -1.08
NUP88-205ENST00000572809 FGFR4P22455 802 aa8.3□□□□□ -1.08
NUP88-205ENST00000572809 YWHABP31946 246 aaKnown RBP8.3□□□□□ -1.08
NUP88-205ENST00000572809 MCM7P33993 719 aa8.3□□□□□ -1.08
NUP88-205ENST00000572809 GATMP50440 423 aa8.3□□□□□ -1.08
NUP88-205ENST00000572809 CLDN10P78369 228 aa8.3□□□□□ -1.08
NUP88-205ENST00000572809 CYP4A11Q02928 519 aa8.3□□□□□ -1.08
NUP88-205ENST00000572809 TFF2Q03403 129 aa8.3□□□□□ -1.08
NUP88-205ENST00000572809 GNL2Q13823 731 aaKnown RBP8.3□□□□□ -1.08
NUP88-205ENST00000572809 PAN2Q504Q3 1202 aaKnown RBP8.3□□□□□ -1.08
NUP88-205ENST00000572809 NAALADL2Q58DX5 795 aa8.3□□□□□ -1.08
NUP88-205ENST00000572809 XKR9Q5GH70 373 aa8.3□□□□□ -1.08
NUP88-205ENST00000572809 XP32Q5T750 250 aa8.3□□□□□ -1.08
NUP88-205ENST00000572809 FAM102BQ5T8I3 360 aa8.3□□□□□ -1.08
NUP88-205ENST00000572809 PLA2G4FQ68DD2 849 aa8.3□□□□□ -1.08
NUP88-205ENST00000572809 VASH1Q7L8A9 365 aaPredicted RBP8.3□□□□□ -1.08
NUP88-205ENST00000572809 ZNF410Q86VK4 478 aa8.3□□□□□ -1.08
NUP88-205ENST00000572809 RHPN2Q8IUC4 686 aa8.3□□□□□ -1.08
NUP88-205ENST00000572809 KSR1Q8IVT5 923 aa8.3□□□□□ -1.08
NUP88-205ENST00000572809 SLC7A3Q8WY07 619 aa8.3□□□□□ -1.08
NUP88-205ENST00000572809 MTMR9Q96QG7 549 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms