RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 RNF169Q8NCN4 708 aa15.92■□□□□ 0.14
NPLOC4-209ENST00000572760 TMEM206Q9H813 350 aa15.92■□□□□ 0.14
NPLOC4-209ENST00000572760 CXXC1Q9P0U4 656 aaPredicted RBP15.92■□□□□ 0.14
NPLOC4-209ENST00000572760 A0A1B0GUA9 196 aa15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 EIF3DO15371 548 aaKnown RBP eCLIP15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 KIF20AO95235 890 aa15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 NPTXRO95502 500 aa15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 SARSP49591 514 aaKnown RBP15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 RAB27AP51159 221 aa15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 CASP5P51878 434 aa15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 EHHADHQ08426 723 aa15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 STK4Q13043 487 aa15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 ZNF568Q3ZCX4 644 aa15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 ZPBP2Q6X784 338 aa15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 ZBTB33Q86T24 672 aa15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 HACE1Q8IYU2 909 aa15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 TDHQ8IZJ6 230 aa15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 LINC01599Q8WXQ3 324 aa15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 KCNN1Q92952 543 aa15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 SLC9A7Q96T83 725 aa15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 ACO2Q99798 780 aaKnown RBP15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 ZBED2Q9BTP6 218 aa15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 FGFBP2Q9BYJ0 223 aa15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 FAM105AQ9NUU6 356 aa15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 ANKFY1Q9P2R3 1169 aa15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 TNFSF13BQ9Y275 285 aa15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 PCDHB7Q9Y5E2 793 aa15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 TDRD15B5MCY1 1934 aaKnown RBP15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 TNRC18O15417 2968 aaPredicted RBP15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 UBE4BO95155 1302 aa15.91■□□□□ 0.14
NPLOC4-209ENST00000572760 TTLL13PA6NNM8 815 aa15.9■□□□□ 0.14
NPLOC4-209ENST00000572760 C9IYK1 514 aa15.9■□□□□ 0.14
NPLOC4-209ENST00000572760 PPP1R37O75864 691 aa15.9■□□□□ 0.14
NPLOC4-209ENST00000572760 EDN1P05305 212 aa15.9■□□□□ 0.14
NPLOC4-209ENST00000572760 HARSP12081 509 aaKnown RBP15.9■□□□□ 0.14
NPLOC4-209ENST00000572760 DEFB103AP81534 67 aa15.9■□□□□ 0.14
NPLOC4-209ENST00000572760 EEF1DP3Q658K8 133 aa15.9■□□□□ 0.14
NPLOC4-209ENST00000572760 ISM2Q6H9L7 571 aa15.9■□□□□ 0.14
NPLOC4-209ENST00000572760 FAM117BQ6P1L5 589 aa15.9■□□□□ 0.14
NPLOC4-209ENST00000572760 MAP4K3Q8IVH8 894 aa15.9■□□□□ 0.14
NPLOC4-209ENST00000572760 NELFCDQ8IXH7 590 aa15.9■□□□□ 0.14
NPLOC4-209ENST00000572760 GLIS3Q8NEA6 775 aa15.9■□□□□ 0.14
NPLOC4-209ENST00000572760 ZNF507Q8TCN5 953 aa15.9■□□□□ 0.14
NPLOC4-209ENST00000572760 SYAP1Q96A49 352 aaPredicted RBP15.9■□□□□ 0.14
NPLOC4-209ENST00000572760 PGBD4Q96DM1 585 aa15.9■□□□□ 0.14
NPLOC4-209ENST00000572760 GTPBP4Q9BZE4 634 aaKnown RBP15.9■□□□□ 0.14
NPLOC4-209ENST00000572760 PDZD7Q9H5P4 517 aa15.9■□□□□ 0.14
NPLOC4-209ENST00000572760 PCDHB2Q9Y5E7 798 aa15.9■□□□□ 0.14
NPLOC4-209ENST00000572760 FNDC1Q4ZHG4 1894 aaPredicted RBP15.9■□□□□ 0.14
NPLOC4-209ENST00000572760 MYO9BQ13459 2157 aa15.9■□□□□ 0.14
NPLOC4-209ENST00000572760 A0A0U1RQF3 1178 aa15.89■□□□□ 0.13
NPLOC4-209ENST00000572760 BIN1O00499 593 aa15.89■□□□□ 0.13
NPLOC4-209ENST00000572760 CLDN3O15551 220 aa15.89■□□□□ 0.13
NPLOC4-209ENST00000572760 TOM1L1O75674 476 aa15.89■□□□□ 0.13
NPLOC4-209ENST00000572760 ATP2A2P16615 1042 aaKnown RBP15.89■□□□□ 0.13
NPLOC4-209ENST00000572760 DCAF4L1Q3SXM0 396 aa15.89■□□□□ 0.13
NPLOC4-209ENST00000572760 ZNF658Q5TYW1 1059 aaPredicted RBP15.89■□□□□ 0.13
NPLOC4-209ENST00000572760 SLFN12LQ6IEE8 588 aa15.89■□□□□ 0.13
NPLOC4-209ENST00000572760 MPZL3Q6UWV2 235 aa15.89■□□□□ 0.13
NPLOC4-209ENST00000572760 EPM2AIP1Q7L775 607 aaPredicted RBP15.89■□□□□ 0.13
NPLOC4-209ENST00000572760 ECHDC2Q86YB7 292 aa15.89■□□□□ 0.13
NPLOC4-209ENST00000572760 NPAS4Q8IUM7 802 aa15.89■□□□□ 0.13
NPLOC4-209ENST00000572760 KIAA0895Q8NCT3 520 aa15.89■□□□□ 0.13
NPLOC4-209ENST00000572760 PHOSPHO2Q8TCD6 241 aa15.89■□□□□ 0.13
NPLOC4-209ENST00000572760 APOL6Q9BWW8 343 aa15.89■□□□□ 0.13
NPLOC4-209ENST00000572760 STRA6Q9BX79 667 aa15.89■□□□□ 0.13
NPLOC4-209ENST00000572760 EIF2AQ9BY44 585 aaKnown RBP15.89■□□□□ 0.13
NPLOC4-209ENST00000572760 TMEM161AQ9NX61 479 aa15.89■□□□□ 0.13
NPLOC4-209ENST00000572760 KIAA1468Q9P260 1216 aa15.89■□□□□ 0.13
NPLOC4-209ENST00000572760 MAN1B1Q9UKM7 699 aa15.89■□□□□ 0.13
NPLOC4-209ENST00000572760 GDAQ9Y2T3 454 aa15.89■□□□□ 0.13
NPLOC4-209ENST00000572760 EOMESO95936 686 aa15.88■□□□□ 0.13
NPLOC4-209ENST00000572760 PIGRP01833 764 aa15.88■□□□□ 0.13
NPLOC4-209ENST00000572760 ITGA4P13612 1032 aa15.88■□□□□ 0.13
NPLOC4-209ENST00000572760 KCNA1Q09470 495 aa15.88■□□□□ 0.13
NPLOC4-209ENST00000572760 STIM1Q13586 685 aa15.88■□□□□ 0.13
NPLOC4-209ENST00000572760 NOLC1Q14978 699 aaKnown RBP eCLIP15.88■□□□□ 0.13
NPLOC4-209ENST00000572760 UBXN11Q5T124 520 aa15.88■□□□□ 0.13
NPLOC4-209ENST00000572760 CCDC183Q5T5S1 534 aa15.88■□□□□ 0.13
NPLOC4-209ENST00000572760 RASIP1Q5U651 963 aa15.88■□□□□ 0.13
NPLOC4-209ENST00000572760 HS2ST1Q7LGA3 356 aa15.88■□□□□ 0.13
NPLOC4-209ENST00000572760 ABI1Q8IZP0 508 aa15.88■□□□□ 0.13
NPLOC4-209ENST00000572760 SPATA20Q8TB22 786 aa15.88■□□□□ 0.13
NPLOC4-209ENST00000572760 SCFD1Q8WVM8 642 aa15.88■□□□□ 0.13
NPLOC4-209ENST00000572760 POMGNT1Q8WZA1 660 aa15.88■□□□□ 0.13
NPLOC4-209ENST00000572760 TOP1MTQ969P6 601 aa15.88■□□□□ 0.13
NPLOC4-209ENST00000572760 ZBTB45Q96K62 511 aaPredicted RBP15.88■□□□□ 0.13
NPLOC4-209ENST00000572760 TRAIPQ9BWF2 469 aa15.88■□□□□ 0.13
NPLOC4-209ENST00000572760 GBP3Q9H0R5 595 aa15.88■□□□□ 0.13
NPLOC4-209ENST00000572760 ELAC1Q9H777 363 aaKnown RBP15.88■□□□□ 0.13
NPLOC4-209ENST00000572760 MAPK8IP1Q9UQF2 711 aa15.88■□□□□ 0.13
NPLOC4-209ENST00000572760 COLQQ9Y215 455 aaPredicted RBP15.88■□□□□ 0.13
NPLOC4-209ENST00000572760 IPPQ9Y573 584 aa15.88■□□□□ 0.13
NPLOC4-209ENST00000572760 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.87■□□□□ 0.13
NPLOC4-209ENST00000572760 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.87■□□□□ 0.13
NPLOC4-209ENST00000572760 ANKRD63C9JTQ0 380 aa15.87■□□□□ 0.13
NPLOC4-209ENST00000572760 HOXA2O43364 376 aa15.87■□□□□ 0.13
NPLOC4-209ENST00000572760 ZNF623O75123 536 aa15.87■□□□□ 0.13
NPLOC4-209ENST00000572760 MCF2P10911 925 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms