RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 EFEMP2O95967 443 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 GLUD1P00367 558 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 C1RP00736 705 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 AXLP30530 894 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 OR1G1P47890 313 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 DSC1Q08554 894 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 EMC2Q15006 297 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 KIAA0319Q5VV43 1072 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 NEK8Q86SG6 692 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 FERMT3Q86UX7 667 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 CCDC105Q8IYK2 499 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 SIX5Q8N196 739 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 HDAC7Q8WUI4 952 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 STAMQ92783 540 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 HAS1Q92839 578 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 CCDC51Q96ER9 411 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 NAP1L4Q99733 375 aaKnown RBP11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 LARP6Q9BRS8 491 aaKnown RBP11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 LXNQ9BS40 222 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 PHF20Q9BVI0 1012 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 RNF39Q9H2S5 420 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 ZSWIM4Q9H7M6 989 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 RXFP1Q9HBX9 757 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 WDR6Q9NNW5 1121 aaKnown RBP11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 BMP2KQ9NSY1 1161 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 KCNJ14Q9UNX9 436 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 IPPQ9Y573 584 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 MARCH6O60337 910 aa11□□□□□ -0.65
TRAPPC1-205ENST00000572656 CCNT1O60563 726 aaKnown RBP11□□□□□ -0.65
TRAPPC1-205ENST00000572656 TSPAN1O60635 241 aa11□□□□□ -0.65
TRAPPC1-205ENST00000572656 N4BP1O75113 896 aaKnown RBP11□□□□□ -0.65
TRAPPC1-205ENST00000572656 NR1I2O75469 434 aa11□□□□□ -0.65
TRAPPC1-205ENST00000572656 PAPLNO95428 1278 aa11□□□□□ -0.65
TRAPPC1-205ENST00000572656 GBP2P32456 591 aaPredicted RBP11□□□□□ -0.65
TRAPPC1-205ENST00000572656 GLUD2P49448 558 aa11□□□□□ -0.65
TRAPPC1-205ENST00000572656 PTENP60484 403 aa11□□□□□ -0.65
TRAPPC1-205ENST00000572656 DSG1Q02413 1049 aa11□□□□□ -0.65
TRAPPC1-205ENST00000572656 NCBP1Q09161 790 aaKnown RBP11□□□□□ -0.65
TRAPPC1-205ENST00000572656 STK3Q13188 491 aa11□□□□□ -0.65
TRAPPC1-205ENST00000572656 MXD4Q14582 209 aaPredicted RBP11□□□□□ -0.65
TRAPPC1-205ENST00000572656 ANGPT1Q15389 498 aa11□□□□□ -0.65
TRAPPC1-205ENST00000572656 XKR9Q5GH70 373 aa11□□□□□ -0.65
TRAPPC1-205ENST00000572656 NOTUMQ6P988 496 aa11□□□□□ -0.65
TRAPPC1-205ENST00000572656 RNF168Q8IYW5 571 aaPredicted RBP11□□□□□ -0.65
TRAPPC1-205ENST00000572656 DTWD2Q8NBA8 298 aa11□□□□□ -0.65
TRAPPC1-205ENST00000572656 DYDC2Q96IM9 177 aa11□□□□□ -0.65
TRAPPC1-205ENST00000572656 GAD1Q99259 594 aa11□□□□□ -0.65
TRAPPC1-205ENST00000572656 MTRQ99707 1265 aa11□□□□□ -0.65
TRAPPC1-205ENST00000572656 EIF2AQ9BY44 585 aaKnown RBP11□□□□□ -0.65
TRAPPC1-205ENST00000572656 TM6SF1Q9BZW5 370 aa11□□□□□ -0.65
TRAPPC1-205ENST00000572656 CSRNP2Q9H175 543 aa11□□□□□ -0.65
TRAPPC1-205ENST00000572656 CHST7Q9NS84 486 aa11□□□□□ -0.65
TRAPPC1-205ENST00000572656 MIOSQ9NXC5 875 aa11□□□□□ -0.65
TRAPPC1-205ENST00000572656 RGL1Q9NZL6 768 aa11□□□□□ -0.65
TRAPPC1-205ENST00000572656 EPS15L1Q9UBC2 864 aa11□□□□□ -0.65
TRAPPC1-205ENST00000572656 WNT16Q9UBV4 365 aa11□□□□□ -0.65
TRAPPC1-205ENST00000572656 CLUHO75153 1309 aa11□□□□□ -0.65
TRAPPC1-205ENST00000572656 CFAP54Q96N23 3096 aa11□□□□□ -0.65
TRAPPC1-205ENST00000572656 MYO15AQ9UKN7 3530 aa10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 ZBTB39O15060 712 aa10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 NARSO43776 548 aaKnown RBP10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 RFPL2O75678 378 aa10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 CDKL5O76039 1030 aa10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 XBP1P17861 261 aa10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 MLH1P40692 756 aa10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 SCNN1GP51170 649 aa10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 POU5F1BQ06416 359 aa10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 SPIRE1Q08AE8 756 aa10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 TFDP1Q14186 410 aa10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 CTTNQ14247 550 aaKnown RBP10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 NCAPH2Q6IBW4 605 aa10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 PIK3AP1Q6ZUJ8 805 aa10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 IFNLR1Q8IU57 520 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 GPR65Q8IYL9 337 aa10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 SLFN12Q8IYM2 578 aa10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 ADSSL1Q8N142 457 aa10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 SLC44A3Q8N4M1 653 aa10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 RSAD2Q8WXG1 361 aa10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 SMG7Q92540 1137 aaKnown RBP10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 NXPE3Q969Y0 559 aa10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 ZNF707Q96C28 371 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 CPB2Q96IY4 423 aa10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 COLEC11Q9BWP8 271 aa10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 PLEKHA4Q9H4M7 779 aa10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 XPNPEP1Q9NQW7 623 aa10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 GIT1Q9Y2X7 761 aa10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 HES2Q9Y543 173 aa10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 MYH9P35579 1960 aaKnown RBP10.99□□□□□ -0.65
TRAPPC1-205ENST00000572656 F8W810 466 aa10.98□□□□□ -0.65
TRAPPC1-205ENST00000572656 INO80B-WBP1J3KQ70 363 aa10.98□□□□□ -0.65
TRAPPC1-205ENST00000572656 STK25O00506 426 aa10.98□□□□□ -0.65
TRAPPC1-205ENST00000572656 SLITRK3O94933 977 aa10.98□□□□□ -0.65
TRAPPC1-205ENST00000572656 LYPLA2O95372 231 aa10.98□□□□□ -0.65
TRAPPC1-205ENST00000572656 BAG4O95429 457 aaKnown RBP10.98□□□□□ -0.65
TRAPPC1-205ENST00000572656 CFHP08603 1231 aa10.98□□□□□ -0.65
TRAPPC1-205ENST00000572656 SPATA31D3P0C874 917 aa10.98□□□□□ -0.65
TRAPPC1-205ENST00000572656 SRFP11831 508 aa10.98□□□□□ -0.65
TRAPPC1-205ENST00000572656 CYP4A11Q02928 519 aa10.98□□□□□ -0.65
TRAPPC1-205ENST00000572656 MBTD1Q05BQ5 628 aa10.98□□□□□ -0.65
TRAPPC1-205ENST00000572656 AMHR2Q16671 573 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms